AD-Enhancer-Remodelling / ChIP-seq workflow / cluster.json
cluster.json
Raw
{
    "__default__" :
    {
        "queueSLURM": "htc",
        "group"     : "zaugg",
        "nCPUs"     : "{threads}",
        "memory"    : 35000,
        "maxTime"   : "24:00:00",
        "name"      : "HC_chipseq.{rule}.{wildcards}",
        "output"    : "/scratch/daga/Psoriasis_SLE/Psoriasis_SLE_all_batches/Psoriasis_SLE_seq_all_rounds_last/Logs_and_Benchmarks/{rule}.{wildcards}.out",
        "error"     : "/scratch/daga/Psoriasis_SLE/Psoriasis_SLE_all_batches/Psoriasis_SLE_seq_all_rounds_last/Logs_and_Benchmarks/{rule}.{wildcards}.err"
    },

    "alignment" :
    {
        "queueSLURM": "htc",
        "maxTime"   :"24:00:00",
        "memory"    : 40000
    }

}