IPMNPDACpaperArchive / IPMNPDAC_WGS / Data / 41sampleDriverAllmutsDirectHeatmap.csv
41sampleDriverAllmutsDirectHeatmap.csv
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sample,value,category
case13_S4,Pancreatitis,Pathology
case13_S4,Non-invasive,Invasive
case4_S5,Non-invasive,Invasive
case4_S5,IPMN_LGD,Pathology
case4_S5,translocation_nonExon,RPN1
case2_S10,IPMN_LGD,Pathology
case2_S10,Non-invasive,Invasive
case15_S3,Loss,ARID1B
case15_S3,Loss,LATS1
case15_S3,Loss,U2AF1
case15_S3,Loss,SMAD4
case15_S3,Loss,RNF43
case15_S3,Loss,CDKN2A
case15_S3,Non-invasive,Invasive
case15_S3,IPMN_LGD,Pathology
case4_S4,Non-invasive,Invasive
case4_S4,missense,KRAS
case4_S4,IPMN_LGD,Pathology
case4_S4,Loss,CDKN2A
case4_S4,Loss,SMAD4
case4_S4,Loss,U2AF1
case4_S4,Loss,FAT1
case4_S4,Loss,FBXW7
case4_S4,Loss,LATS1
case4_S4,Loss,ARID1B
case15_S1,Non-invasive,Invasive
case15_S1,IPMN_LGD,Pathology
case15_S1,Loss,CDKN2A
case4_S3,missense,GNAS
case4_S3,IPMN_LGD,Pathology
case4_S3,Non-invasive,Invasive
case4_S3,missense,KRAS
case12_S1,missense,GNAS
case12_S1,Non-invasive,Invasive
case12_S1,Loss,BIRC6
case12_S1,IPMN_LGD,Pathology
case3_S2,Loss,ARID1B
case3_S2,Loss,LATS1
case3_S2,Non-invasive,Invasive
case3_S2,IPMN_LGD,Pathology
case3_S2,translocation_nonExon,QKI
case3_S2,missense,KRAS
case3_S2,Loss,CDKN2A
case12_S2,tandem-duplication_nonExon,CREBBP
case12_S2,Non-invasive,Invasive
case12_S2,IPMN_LGD,Pathology
case12_S2,missense,GNAS
case12_S5,IPMN_LGD,Pathology
case12_S5,missense,GNAS
case12_S5,Non-invasive,Invasive
case10_S2,translocation_nonExon,STAT5B
case10_S2,Loss,SPEN
case10_S2,Loss,ARID1A
case10_S2,Loss,CDKN2A
case10_S2,Non-invasive,Invasive
case10_S2,IPMN_LGD,Pathology
case10_S2,translocation_nonExon,ZNF429
case10_S2,frameshift_Del,RNF43
case10_S2,frameshift_Ins,RNF43
case10_S2,missense,KRAS
case10_S2,3UTR,ATM
case10_S2,missense,GNAS
case4_S1,Loss,FAT1
case4_S1,missense,KRAS
case4_S1,inversion_nonExon,ROBO2
case4_S1,translocation_nonExon,ROBO2
case4_S1,Loss,FBXW7
case4_S1,deletion_nonExon,ARID1A
case4_S1,deletion_nonExon,LRP1B
case4_S1,IPMN_LGD,Pathology
case4_S1,Non-invasive,Invasive
case4_S1,Loss,CDKN2A
case4_S1,Loss,SMAD4
case10_S5,Loss,CDKN2A
case10_S5,Non-invasive,Invasive
case10_S5,IPMN_LGD,Pathology
case10_S5,missense,KRAS
case10_S5,3UTR,ATM
case10_S5,missense,GNAS
case3_S1,IPMN_LGD,Pathology
case3_S1,translocation_nonExon,BRIP1
case3_S1,deletion_nonExon,SMAD4
case3_S1,ess_splice_Del,RNF43
case3_S1,missense,NBEA
case3_S1,missense,KRAS
case3_S1,Loss,ARID1B
case3_S1,Non-invasive,Invasive
case3_S1,Loss,ARID1A
case3_S1,Loss,SPEN
case3_S1,Loss,CDKN2A
case3_S1,Loss,SMAD4
case3_S1,Loss,LATS1
case3_S4,deletion_nonExon,SMAD4
case3_S4,missense,KRAS
case3_S4,Loss,ARID1B
case3_S4,Loss,LATS1
case3_S4,missense,NBEA
case3_S4,Loss,CDKN2A
case3_S4,Non-invasive,Invasive
case3_S4,IPMN_LGD,Pathology
case3_S4,ess_splice_Del,RNF43
case12_S3,Non-invasive,Invasive
case12_S3,missense,GNAS
case12_S3,IPMN_LGD,Pathology
case2_S4,Loss,BIRC6
case2_S4,Loss,FBXW7
case2_S4,Loss,FAT1
case2_S4,Non-invasive,Invasive
case2_S4,IPMN_HGD,Pathology
case2_S2,IPMN_HGD,Pathology
case2_S2,Loss,RNF43
case2_S2,Non-invasive,Invasive
case2_S2,inversion_nonExon,RALGDS
case2_S2,missense,TP53
case2_S2,inversion_nonExon,NR4A3
case2_S2,deletion_nonExon,ROBO2
case2_S2,deletion_nonExon,PTPRD
case2_S2,tandem-duplication_nonExon,PTPRD
case2_S2,frameshift_Del,RNF43
case2_S2,nonsense,CDKN2A
case2_S2,missense,TP53
case2_S2,inversion_nonExon,RALGDS
case15_S4,missense,KRAS
case15_S4,missense,GNAS
case15_S4,frameshift_Del,ATM
case15_S4,frameshift_Ins,KDM6A
case15_S4,deletion_nonExon,TMPRSS2
case15_S4,IPMN_HGD,Pathology
case15_S4,Loss,U2AF1
case15_S4,Loss,CDKN2A
case15_S4,Loss,SMAD4
case15_S4,nonsense,ATM
case15_S4,Loss,ARID1B
case15_S4,Loss,ARID1A
case15_S4,Loss,SPEN
case15_S4,Non-invasive,Invasive
case15_S4,upstream,FAT3
case15_S4,Loss,LATS1
case16_S2,Loss,FAT1
case16_S2,Loss,ARID1B
case16_S2,Loss,LATS1
case16_S2,Loss,FBXW7
case16_S2,Loss,U2AF1
case16_S2,Loss,SMAD4
case16_S2,Loss,RNF43
case16_S2,Loss,CDKN2A
case16_S2,Non-invasive,Invasive
case16_S2,IPMN_HGD,Pathology
case16_S2,deletion_3UTRexon,MDM2
case16_S2,deletion_nonExon,ARID1B
case7_S1,Loss,RNF43
case7_S1,missense,KRAS
case7_S1,missense,TP53
case7_S1,Loss,SMAD4
case7_S1,frameshift_Del,ARID1A
case7_S1,nonsense,KMT2C
case7_S1,Loss,LATS1
case7_S1,Loss,ARID1B
case7_S1,IPMN_HGD,Pathology
case7_S1,tandem-duplication_nonExon,ERC1
case7_S1,inversion_nonExon,KDM5A
case7_S1,deletion_nonExon,HOOK3
case7_S1,Non-invasive,Invasive
case7_S1,tandem-duplication_nonExon,HOOK3
case7_S1,inversion_nonExon,ANK1
case7_S1,deletion_nonExon,ANK1
case7_S1,inversion_nonExon,ANK1
case7_S1,inversion_nonExon,HOOK3
case7_S1,inversion_nonExon,FHIT
case7_S5,inversion_nonExon,ANK1
case7_S5,deletion_nonExon,ANK1
case7_S5,inversion_nonExon,ANK1
case7_S5,tandem-duplication_nonExon,MYH9
case7_S5,inversion_nonExon,RUNX1
case7_S5,frameshift_Del,ARID1A
case7_S5,nonsense,KMT2C
case7_S5,missense,LRP1B
case7_S5,inversion_nonExon,ETV6
case7_S5,tandem-duplication_nonExon,MYH9
case7_S5,inversion_nonExon,ETV6
case7_S5,Loss,U2AF1
case7_S5,inversion_3UTRexon,MYB
case7_S5,deletion_3UTRexon,MYB
case7_S5,deletion_exon,MUC4
case7_S5,IPMN_HGD_PDAC,Pathology
case7_S5,Invasive,Invasive
case7_S5,Loss,RNF43
case7_S5,Loss,LATS1
case7_S5,Loss,ARID1B
case7_S5,Loss,ARID1A
case7_S5,Loss,SPEN
case7_S5,missense,TP53
case7_S5,translocation_nonExon,RB1
case7_S5,missense,KRAS
case7_S5,deletion_exon,THRAP3
case7_S4,inversion_nonExon,RUNX1
case7_S4,frameshift_Del,ARID1A
case7_S4,missense,KRAS
case7_S4,missense,TP53
case7_S4,missense,LRP1B
case7_S4,Loss,SPEN
case7_S4,Loss,ARID1A
case7_S4,Loss,ARID1B
case7_S4,Loss,LATS1
case7_S4,Loss,U2AF1
case7_S4,Loss,RNF43
case7_S4,Invasive,Invasive
case7_S4,nonsense,KMT2C
case7_S4,deletion_exon,THRAP3
case7_S4,IPMN_HGD_PDAC,Pathology
case7_S4,tandem-duplication_nonExon,MYH9
case7_S4,tandem-duplication_nonExon,MYH9
case7_S4,inversion_nonExon,ANK1
case7_S4,inversion_nonExon,ANK1
case7_S4,deletion_nonExon,ANK1
case7_S4,inversion_nonExon,ETV6
case7_S4,translocation_nonExon,RB1
case7_S4,inversion_3UTRexon,MYB
case7_S4,deletion_3UTRexon,MYB
case7_S4,inversion_nonExon,ETV6
case9_S4,missense,KRAS
case9_S4,IPMN_HGD_PDAC,Pathology
case9_S4,frameshift_Ins,TP53
case9_S4,deletion_nonExon,PPM1D
case9_S4,Invasive,Invasive
case9_S4,Loss,LATS1
case9_S4,Loss,RNF43
case9_S4,Loss,SMAD4
case9_S4,Loss,U2AF1
case9_S4,Loss,ARID1B
case9_S4,Loss,CDKN2A
case6_S7,upstream,GNAS
case6_S7,Silent,ARID1A
case6_S7,3UTR,WT1
case6_S7,missense,KRAS
case6_S7,frameshift_Del,TP53
case6_S7,Loss,RNF43
case6_S7,deletion_nonExon,FHIT
case6_S7,Loss,BIRC6
case6_S7,Loss,ARID1B
case6_S7,Loss,LATS1
case6_S7,Loss,FBXW7
case6_S7,Loss,FAT1
case6_S7,deletion_nonExon,CREB1
case6_S7,Loss,SMAD4
case6_S7,Loss,U2AF1
case6_S7,Loss,CDKN2A
case6_S7,Invasive,Invasive
case6_S7,IPMN_HGD_PDAC,Pathology
case6_S7,deletion_nonExon,FANCD2
case6_S7,tandem-duplication_nonExon,ALK
case6_S7,deletion_nonExon,STIL
case3_S5,Loss,SPEN
case3_S5,Loss,ARID1A
case3_S5,Invasive,Invasive
case3_S5,PDAC,Pathology
case11_S8,Loss,RNF43
case11_S8,Invasive,Invasive
case11_S8,PDAC,Pathology
case4_S2,Loss,FBXW7
case4_S2,Loss,LATS1
case4_S2,Loss,ARID1B
case4_S2,Loss,SMAD4
case4_S2,Loss,CDKN2A
case4_S2,Invasive,Invasive
case4_S2,PDAC,Pathology
case4_S2,Loss,FAT1
case4_S2,deletion_nonExon,RNF213
case4_S2,missense,GNAS
case15_S10,tandem-duplication_nonExon,SMAD4
case15_S10,PDAC,Pathology
case15_S10,Loss,LATS1
case15_S10,Loss,CDKN2A
case15_S10,Loss,U2AF1
case15_S10,missense,TP53
case15_S10,Loss,ARID1B
case15_S10,Invasive,Invasive
case15_S10,missense,KRAS
case15_S10,Loss,SMAD4
case13_S3,Loss,ARID1B
case13_S3,Loss,BIRC6
case13_S3,frameshift_Del,CDKN2A
case13_S3,PDAC,Pathology
case13_S3,missense,LRP1B
case13_S3,missense,ACVR2A
case13_S3,Loss,CDKN2A
case13_S3,Loss,SMAD4
case13_S3,Loss,LATS1
case13_S3,Invasive,Invasive
case16_S4,translocation_nonExon,PTPRD
case16_S4,upstream,FAT3
case16_S4,translocation_nonExon,PTPRD
case16_S4,translocation_nonExon,PTPRD
case16_S4,translocation_nonExon,PTPRD
case16_S4,translocation_nonExon,PTPRD
case16_S4,inversion_nonExon,PTPRD
case16_S4,translocation_nonExon,PTPRD
case16_S4,deletion_nonExon,ARID1B
case16_S4,translocation_nonExon,RGS7
case16_S4,translocation_5UTRexon,PDCD1LG2
case16_S4,deletion_3UTRexon,MDM2
case16_S4,PDAC,Pathology
case16_S4,Invasive,Invasive
case16_S4,Loss,CDKN2A
case16_S4,Loss,SMAD4
case16_S4,inversion_nonExon,PTPRD
case15_S11,missense,KRAS
case15_S11,tandem-duplication_nonExon,SMAD4
case15_S11,missense,TP53
case15_S11,tandem-duplication_nonExon,CBLB
case15_S11,Loss,LATS1
case15_S11,PDAC,Pathology
case15_S11,Invasive,Invasive
case15_S11,Loss,SMAD4
case15_S11,Loss,ARID1B
case15_S11,deletion_nonExon,ANK1
case9_S6,missense,KRAS
case9_S6,missense,LRP1B
case9_S6,frameshift_Ins,TP53
case9_S6,deletion_nonExon,WDCP
case9_S6,deletion_nonExon,BCOR
case9_S6,deletion_nonExon,PPM1D
case9_S6,deletion_nonExon,DCC
case9_S6,Invasive,Invasive
case9_S6,Loss,CDKN2A
case9_S6,Loss,RNF43
case9_S6,Loss,U2AF1
case9_S6,Loss,FAT1
case9_S6,Loss,FBXW7
case9_S6,Loss,LATS1
case9_S6,Loss,ARID1B
case9_S6,PDAC,Pathology
case16_S5,Loss,U2AF1
case16_S5,Loss,SMAD4
case16_S5,Invasive,Invasive
case16_S5,Loss,CDKN2A
case16_S5,missense,SMAD4
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,inversion_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,translocation_nonExon,PTPRD
case16_S5,inversion_nonExon,PTPRD
case16_S5,translocation_nonExon,FOXP1
case16_S5,deletion_nonExon,TERT
case16_S5,translocation_5UTRexon,PDCD1LG2
case16_S5,deletion_3UTRexon,MDM2
case16_S5,PDAC,Pathology
case16_S5,Loss,RNF43
case16_S5,translocation_nonExon,LPP
case16_S5,Loss,FBXW7
case16_S5,Loss,FAT1
case6_S8,Loss,BIRC6
case6_S8,Loss,ARID1B
case6_S8,Loss,LATS1
case6_S8,Loss,FBXW7
case6_S8,Loss,FAT1
case6_S8,Loss,U2AF1
case6_S8,Loss,SMAD4
case6_S8,Loss,CDKN2A
case6_S8,Invasive,Invasive
case6_S8,PDAC,Pathology
case6_S8,Loss,RNF43
case6_S8,tandem-duplication_nonExon,ALK
case6_S8,deletion_nonExon,FANCD2
case6_S8,3UTR,WT1
case6_S8,missense,KRAS
case6_S8,upstream,GNAS
case6_S8,Silent,ARID1A
case6_S8,deletion_nonExon,FHIT
case6_S8,inversion_nonExon,TERT
case6_S8,deletion_nonExon,STIL
case6_S8,frameshift_Del,TP53
case13_S5,missense,RNF43
case13_S5,Loss,LATS1
case13_S5,Loss,U2AF1
case13_S5,Loss,SMAD4
case13_S5,Loss,CDKN2A
case13_S5,Invasive,Invasive
case13_S5,PDAC,Pathology
case13_S5,inversion_nonExon,RGS7
case13_S5,frameshift_Del,CDKN2A
case13_S5,missense,TP53
case13_S5,missense,LRP1B
case13_S5,Loss,ARID1B
case13_S5,missense,KRAS
case13_S5,Loss,BIRC6
case6_S9,Invasive,Invasive
case6_S9,PDAC,Pathology
case6_S9,Loss,CDKN2A
case6_S9,Loss,RNF43
case6_S9,Loss,SMAD4
case6_S9,Loss,BIRC6
case6_S9,Loss,ARID1B
case6_S9,Loss,LATS1
case6_S9,Loss,FBXW7
case6_S9,Loss,U2AF1
case6_S9,deletion_nonExon,FANCD2
case6_S9,tandem-duplication_nonExon,ALK
case6_S9,deletion_nonExon,STIL
case6_S9,Silent,ARID1A
case6_S9,missense,KRAS
case6_S9,upstream,GNAS
case6_S9,frameshift_Del,TP53
case6_S9,deletion_nonExon,FHIT
case6_S9,Loss,FAT1
case9_S2,missense,KRAS
case9_S2,3UTR,NBEA
case9_S2,missense,LRP1B
case9_S2,frameshift_Ins,TP53
case9_S2,deletion_nonExon,PPM1D
case9_S2,deletion_nonExon,RSPO2
case9_S2,deletion_nonExon,DCC
case9_S2,PDAC,Pathology
case9_S2,Invasive,Invasive
case9_S2,Loss,RNF43
case9_S2,Loss,U2AF1
case9_S2,Loss,LATS1
case9_S2,Loss,ARID1B
case9_S2,deletion_nonExon,WDCP
case9_S2,Loss,CDKN2A
case11_S7,upstream,ZFHX3
case11_S7,Loss,ARID1B
case11_S7,downstream,ATM
case11_S7,3UTR,ATM
case11_S7,downstream,NRAS
case11_S7,Loss,SMAD4
case11_S7,Loss,RNF43
case11_S7,Loss,CDKN2A
case11_S7,Invasive,Invasive
case11_S7,PDAC,Pathology
case11_S7,deletion_nonExon,CSMD3
case11_S7,deletion_nonExon,CSMD3
case11_S7,inversion_nonExon,CSMD3
case11_S7,inversion_nonExon,CSMD3
case11_S7,deletion_nonExon,CSMD3
case11_S7,inversion_nonExon,CSMD3
case11_S7,deletion_nonExon,CAMTA1
case11_S7,Silent,LRP1B
case11_S7,missense,TP53
case11_S7,Loss,LATS1
case11_S7,Loss,U2AF1
case9_S3,3UTR,FAT3
case9_S3,Loss,LATS1
case9_S3,Loss,U2AF1
case9_S3,Loss,RNF43
case9_S3,Loss,CDKN2A
case9_S3,Invasive,Invasive
case9_S3,PDAC,Pathology
case9_S3,tandem-duplication_nonExon,MECOM
case9_S3,deletion_nonExon,PPM1D
case9_S3,deletion_nonExon,RSPO2
case9_S3,deletion_nonExon,WDCP
case9_S3,frameshift_Ins,TP53
case9_S3,missense,LRP1B
case9_S3,missense,KRAS
case9_S3,Loss,ARID1B
case9_S3,deletion_nonExon,DCC
case15_S4,missense,KLF4
case9_S3,upstream,KLF4