IPMNPDACpaperArchive / IPMNPDAC_WGS / Data / sigDPC / step1seqProcessed / case2_S10_SBSseqinfo.csv
case2_S10_SBSseqinfo.csv
Raw
chr_pos,samples,chrs,sampleMut,pos,mutationType,mutationTypeSeq,orientation
10_10038554,case2_S10,10,case2_S10_T[C>A]T,10038554,N:AT[C>A]TA,T[C>A]T,-1
10_54406114,case2_S10,10,case2_S10_G[T>C]A,54406114,T:TG[T>C]AT,G[T>C]A,1
11_96967405,case2_S10,11,case2_S10_A[C>T]G,96967405,N:TA[C>T]GC,A[C>T]G,-1
12_77536696,case2_S10,12,case2_S10_G[C>T]G,77536696,T:TG[C>T]GT,G[C>T]G,-1
12_102743191,case2_S10,12,case2_S10_G[C>A]T,102743191,N:TG[C>A]TG,G[C>A]T,1
12_126520024,case2_S10,12,case2_S10_C[C>A]A,126520024,N:CC[C>A]AC,C[C>A]A,-1
12_130099502,case2_S10,12,case2_S10_T[T>G]G,130099502,N:CT[T>G]GG,T[T>G]G,1
13_57634655,case2_S10,13,case2_S10_A[C>T]A,57634655,U:GA[C>T]AT,A[C>T]A,1
14_46844409,case2_S10,14,case2_S10_A[C>T]G,46844409,U:GA[C>T]GC,A[C>T]G,-1
14_72474590,case2_S10,14,case2_S10_A[C>T]G,72474590,T:TA[C>T]GT,A[C>T]G,-1
15_24882831,case2_S10,15,case2_S10_T[T>A]T,24882831,T:TT[T>A]TT,T[T>A]T,-1
15_51126653,case2_S10,15,case2_S10_T[C>A]G,51126653,N:CT[C>A]GA,T[C>A]G,1
15_51201584,case2_S10,15,case2_S10_G[C>T]G,51201584,N:GG[C>T]GC,G[C>T]G,1
18_28736835,case2_S10,18,case2_S10_T[C>A]T,28736835,N:AT[C>A]TT,T[C>A]T,1
18_36297917,case2_S10,18,case2_S10_G[C>G]C,36297917,U:GG[C>G]CG,G[C>G]C,1
18_72734437,case2_S10,18,case2_S10_T[C>A]A,72734437,N:AT[C>A]AA,T[C>A]A,-1
19_47670486,case2_S10,19,case2_S10_C[C>T]T,47670486,U:CC[C>T]TG,C[C>T]T,1
1_19700705,case2_S10,1,case2_S10_C[C>T]T,19700705,T:GC[C>T]TG,C[C>T]T,1
1_77773350,case2_S10,1,case2_S10_T[C>T]G,77773350,N:CT[C>T]GG,T[C>T]G,1
1_161226648,case2_S10,1,case2_S10_T[C>A]C,161226648,T:CT[C>A]CT,T[C>A]C,-1
1_203272079,case2_S10,1,case2_S10_C[T>C]A,203272079,N:AC[T>C]AC,C[T>C]A,1
1_223527665,case2_S10,1,case2_S10_G[C>A]C,223527665,N:AG[C>A]CA,G[C>A]C,-1
1_236154237,case2_S10,1,case2_S10_T[C>T]G,236154237,T:TT[C>T]GC,T[C>T]G,-1
20_9044370,case2_S10,20,case2_S10_C[C>T]G,9044370,N:TC[C>T]GT,C[C>T]G,1
20_41794244,case2_S10,20,case2_S10_G[C>T]G,41794244,N:CG[C>T]GC,G[C>T]G,1
20_46884588,case2_S10,20,case2_S10_A[C>T]T,46884588,N:AA[C>T]TG,A[C>T]T,1
20_52681885,case2_S10,20,case2_S10_A[C>A]A,52681885,N:AA[C>A]AA,A[C>A]A,-1
21_35856433,case2_S10,21,case2_S10_A[C>A]C,35856433,U:AA[C>A]CT,A[C>A]C,-1
2_63045460,case2_S10,2,case2_S10_G[C>T]C,63045460,T:TG[C>T]CT,G[C>T]C,-1
2_136950200,case2_S10,2,case2_S10_C[C>T]G,136950200,U:GC[C>T]GA,C[C>T]G,1
2_168135645,case2_S10,2,case2_S10_A[T>C]T,168135645,T:AA[T>C]TC,A[T>C]T,1
2_237213665,case2_S10,2,case2_S10_T[T>C]A,237213665,N:CT[T>C]AT,T[T>C]A,1
2_238478000,case2_S10,2,case2_S10_G[T>C]G,238478000,N:AG[T>C]GG,G[T>C]G,1
3_850936,case2_S10,3,case2_S10_T[C>A]G,850936,N:TT[C>A]GT,T[C>A]G,1
3_11029278,case2_S10,3,case2_S10_C[C>T]G,11029278,U:TC[C>T]GC,C[C>T]G,1
3_80534861,case2_S10,3,case2_S10_C[C>T]T,80534861,N:TC[C>T]TG,C[C>T]T,1
3_86055561,case2_S10,3,case2_S10_C[C>A]C,86055561,T:AC[C>A]CA,C[C>A]C,-1
4_33480386,case2_S10,4,case2_S10_G[C>A]A,33480386,N:GG[C>A]AA,G[C>A]A,1
4_44639136,case2_S10,4,case2_S10_G[T>C]T,44639136,T:GG[T>C]TT,G[T>C]T,1
4_59202050,case2_S10,4,case2_S10_T[T>A]T,59202050,N:TT[T>A]TT,T[T>A]T,1
4_60087218,case2_S10,4,case2_S10_A[T>A]T,60087218,N:AA[T>A]TA,A[T>A]T,1
5_23128274,case2_S10,5,case2_S10_A[C>T]G,23128274,N:TA[C>T]GC,A[C>T]G,-1
5_92212869,case2_S10,5,case2_S10_A[T>A]T,92212869,N:CA[T>A]TG,A[T>A]T,-1
5_102429405,case2_S10,5,case2_S10_C[T>C]A,102429405,T:CC[T>C]AG,C[T>C]A,1
5_112124362,case2_S10,5,case2_S10_A[C>A]C,112124362,N:AA[C>A]CA,A[C>A]C,-1
5_155410419,case2_S10,5,case2_S10_T[T>G]A,155410419,N:GT[T>G]AA,T[T>G]A,1
6_97627958,case2_S10,6,case2_S10_A[T>C]T,97627958,N:TA[T>C]TT,A[T>C]T,-1
6_99342849,case2_S10,6,case2_S10_A[T>C]C,99342849,T:CA[T>C]CC,A[T>C]C,1
8_38338128,case2_S10,8,case2_S10_C[C>T]G,38338128,T:CC[C>T]GT,C[C>T]G,1
8_56051170,case2_S10,8,case2_S10_G[C>T]G,56051170,N:TG[C>T]GG,G[C>T]G,1
9_30121816,case2_S10,9,case2_S10_G[C>T]G,30121816,N:AG[C>T]GT,G[C>T]G,1
9_80346232,case2_S10,9,case2_S10_A[T>C]G,80346232,N:TA[T>C]GC,A[T>C]G,-1
X_15258885,case2_S10,X,case2_S10_C[T>G]G,15258885,U:TC[T>G]GA,C[T>G]G,-1
X_21488556,case2_S10,X,case2_S10_T[T>C]A,21488556,T:TT[T>C]AT,T[T>C]A,-1
X_144828186,case2_S10,X,case2_S10_A[T>G]C,144828186,N:TA[T>G]CA,A[T>G]C,1
X_153409647,case2_S10,X,case2_S10_G[C>T]G,153409647,N:CG[C>T]GT,G[C>T]G,-1