IPMNPDAC_WGS/Data/sigDPC/step1seqProcessed/case6_S8_SBSseqinfo.csv · IPMNPDACpaperArchive

chr_pos,samples,chrs,sampleMut,pos,mutationType,mutationTypeSeq,orientation
10_1190952,case6_S8,10,case6_S8_C[C>T]G,1190952,T:TC[C>T]GG,C[C>T]G,1
10_1736620,case6_S8,10,case6_S8_T[C>T]C,1736620,T:CT[C>T]CG,T[C>T]C,1
10_1773048,case6_S8,10,case6_S8_A[C>T]G,1773048,N:CA[C>T]GG,A[C>T]G,1
10_2446038,case6_S8,10,case6_S8_A[T>C]G,2446038,N:AA[T>C]GT,A[T>C]G,1
10_6177716,case6_S8,10,case6_S8_A[C>T]G,6177716,U:GA[C>T]GG,A[C>T]G,1
10_6611951,case6_S8,10,case6_S8_A[T>A]T,6611951,N:AA[T>A]TC,A[T>A]T,-1
10_8190728,case6_S8,10,case6_S8_T[T>A]A,8190728,N:TT[T>A]AA,T[T>A]A,-1
10_8685674,case6_S8,10,case6_S8_T[C>T]G,8685674,N:TT[C>T]GA,T[C>T]G,1
10_8925534,case6_S8,10,case6_S8_A[C>T]G,8925534,N:AA[C>T]GA,A[C>T]G,-1
10_9293368,case6_S8,10,case6_S8_A[C>T]G,9293368,N:CA[C>T]GC,A[C>T]G,1
10_9360334,case6_S8,10,case6_S8_G[C>A]G,9360334,N:TG[C>A]GA,G[C>A]G,-1
10_9533196,case6_S8,10,case6_S8_C[T>C]T,9533196,N:CC[T>C]TT,C[T>C]T,-1
10_10368416,case6_S8,10,case6_S8_A[C>A]C,10368416,N:AA[C>A]CT,A[C>A]C,-1
10_10614962,case6_S8,10,case6_S8_A[C>T]G,10614962,N:GA[C>T]GA,A[C>T]G,1
10_10817328,case6_S8,10,case6_S8_G[C>T]T,10817328,T:TG[C>T]TA,G[C>T]T,-1
10_13017497,case6_S8,10,case6_S8_G[T>C]C,13017497,U:TG[T>C]CA,G[T>C]C,-1
10_13046960,case6_S8,10,case6_S8_T[T>C]T,13046960,U:TT[T>C]TT,T[T>C]T,-1
10_14125713,case6_S8,10,case6_S8_C[T>A]C,14125713,T:TC[T>A]CA,C[T>A]C,1
10_17524956,case6_S8,10,case6_S8_A[C>T]A,17524956,N:GA[C>T]AG,A[C>T]A,1
10_17911793,case6_S8,10,case6_S8_T[C>T]G,17911793,N:AT[C>T]GT,T[C>T]G,-1
10_18284819,case6_S8,10,case6_S8_G[C>T]A,18284819,T:TG[C>T]AT,G[C>T]A,-1
10_19072314,case6_S8,10,case6_S8_A[C>T]G,19072314,T:GA[C>T]GG,A[C>T]G,-1
10_19374031,case6_S8,10,case6_S8_G[C>T]G,19374031,U:AG[C>T]GG,G[C>T]G,1
10_19843339,case6_S8,10,case6_S8_T[C>T]G,19843339,T:AT[C>T]GA,T[C>T]G,-1
10_20422581,case6_S8,10,case6_S8_A[C>T]G,20422581,N:CA[C>T]GT,A[C>T]G,1
10_23209589,case6_S8,10,case6_S8_C[C>T]G,23209589,U:TC[C>T]GT,C[C>T]G,-1
10_23434209,case6_S8,10,case6_S8_A[T>C]G,23434209,N:TA[T>C]GC,A[T>C]G,1
10_25788894,case6_S8,10,case6_S8_T[C>G]A,25788894,N:TT[C>G]AC,T[C>G]A,1
10_25861651,case6_S8,10,case6_S8_T[T>A]T,25861651,N:GT[T>A]TT,T[T>A]T,1
10_26264932,case6_S8,10,case6_S8_T[C>T]A,26264932,T:GT[C>T]AC,T[C>T]A,-1
10_26358789,case6_S8,10,case6_S8_C[C>A]A,26358789,N:TC[C>A]AC,C[C>A]A,-1
10_27091886,case6_S8,10,case6_S8_G[C>T]T,27091886,T:GG[C>T]TG,G[C>T]T,1
10_27465319,case6_S8,10,case6_S8_C[T>C]C,27465319,N:CC[T>C]CT,C[T>C]C,1
10_27734745,case6_S8,10,case6_S8_A[T>C]A,27734745,U:AA[T>C]AC,A[T>C]A,-1
10_29731972,case6_S8,10,case6_S8_A[T>A]G,29731972,T:AA[T>A]GG,A[T>A]G,1
10_30691152,case6_S8,10,case6_S8_A[C>A]C,30691152,N:AA[C>A]CT,A[C>A]C,1
10_31303477,case6_S8,10,case6_S8_A[C>T]G,31303477,N:TA[C>T]GA,A[C>T]G,1
10_32907318,case6_S8,10,case6_S8_T[T>G]T,32907318,U:TT[T>G]TG,T[T>G]T,-1
10_33484481,case6_S8,10,case6_S8_A[C>T]A,33484481,N:AA[C>T]AA,A[C>T]A,1
10_35832730,case6_S8,10,case6_S8_T[T>G]T,35832730,N:TT[T>G]TT,T[T>G]T,1
10_36105881,case6_S8,10,case6_S8_A[T>A]T,36105881,N:TA[T>A]TA,A[T>A]T,-1
10_36171531,case6_S8,10,case6_S8_G[T>C]A,36171531,N:TG[T>C]AT,G[T>C]A,1
10_36545952,case6_S8,10,case6_S8_C[C>T]T,36545952,N:AC[C>T]TC,C[C>T]T,-1
10_36654254,case6_S8,10,case6_S8_C[C>T]G,36654254,N:CC[C>T]GT,C[C>T]G,-1
10_36986345,case6_S8,10,case6_S8_C[T>A]T,36986345,N:TC[T>A]TA,C[T>A]T,1
10_36986357,case6_S8,10,case6_S8_G[C>A]A,36986357,N:GG[C>A]AA,G[C>A]A,1
10_37006529,case6_S8,10,case6_S8_G[C>T]G,37006529,N:GG[C>T]GA,G[C>T]G,1
10_37026062,case6_S8,10,case6_S8_G[T>A]G,37026062,N:GG[T>A]GG,G[T>A]G,1
10_37192384,case6_S8,10,case6_S8_A[T>A]A,37192384,U:TA[T>A]AA,A[T>A]A,1
10_37350168,case6_S8,10,case6_S8_C[C>T]T,37350168,T:TC[C>T]TT,C[C>T]T,-1
10_38132353,case6_S8,10,case6_S8_A[C>T]G,38132353,U:AA[C>T]GA,A[C>T]G,1
10_38429586,case6_S8,10,case6_S8_C[T>A]G,38429586,N:GC[T>A]GC,C[T>A]G,-1
10_42256331,case6_S8,10,case6_S8_G[C>T]G,42256331,N:AG[C>T]GT,G[C>T]G,1
10_44557685,case6_S8,10,case6_S8_C[C>T]G,44557685,N:TC[C>T]GA,C[C>T]G,-1
10_44594822,case6_S8,10,case6_S8_G[T>A]C,44594822,N:GG[T>A]CA,G[T>A]C,-1
10_44856526,case6_S8,10,case6_S8_G[C>T]G,44856526,N:TG[C>T]GG,G[C>T]G,1
10_45078770,case6_S8,10,case6_S8_A[T>A]T,45078770,N:GA[T>A]TT,A[T>A]T,-1
10_46240307,case6_S8,10,case6_S8_T[C>T]C,46240307,N:GT[C>T]CT,T[C>T]C,1
10_46796810,case6_S8,10,case6_S8_T[C>T]T,46796810,N:TT[C>T]TA,T[C>T]T,-1
10_46796832,case6_S8,10,case6_S8_C[C>T]T,46796832,N:TC[C>T]TA,C[C>T]T,-1
10_47155186,case6_S8,10,case6_S8_T[C>G]T,47155186,N:AT[C>G]TT,T[C>G]T,1
10_48476105,case6_S8,10,case6_S8_G[C>T]G,48476105,U:GG[C>T]GG,G[C>T]G,-1
10_49679894,case6_S8,10,case6_S8_G[C>T]G,49679894,T:GG[C>T]GC,G[C>T]G,-1
10_51543914,case6_S8,10,case6_S8_G[T>G]A,51543914,U:AG[T>G]AT,G[T>G]A,1
10_54468857,case6_S8,10,case6_S8_T[T>G]G,54468857,T:GT[T>G]GT,T[T>G]G,1
10_55803864,case6_S8,10,case6_S8_C[C>T]C,55803864,N:AC[C>T]CA,C[C>T]C,-1
10_56573343,case6_S8,10,case6_S8_A[T>A]T,56573343,N:GA[T>A]TG,A[T>A]T,-1
10_57660151,case6_S8,10,case6_S8_G[C>T]A,57660151,N:TG[C>T]AG,G[C>T]A,-1
10_59492256,case6_S8,10,case6_S8_A[C>T]G,59492256,N:AA[C>T]GG,A[C>T]G,1
10_59547043,case6_S8,10,case6_S8_T[T>G]T,59547043,N:CT[T>G]TC,T[T>G]T,1
10_60619507,case6_S8,10,case6_S8_G[C>G]C,60619507,T:GG[C>G]CA,G[C>G]C,1
10_62148918,case6_S8,10,case6_S8_C[C>T]C,62148918,N:GC[C>T]CA,C[C>T]C,1
10_62657606,case6_S8,10,case6_S8_C[C>T]G,62657606,U:CC[C>T]GG,C[C>T]G,1
10_62886681,case6_S8,10,case6_S8_C[C>T]G,62886681,N:TC[C>T]GT,C[C>T]G,-1
10_64277051,case6_S8,10,case6_S8_A[C>T]G,64277051,N:CA[C>T]GT,A[C>T]G,1
10_64643773,case6_S8,10,case6_S8_A[C>T]C,64643773,N:AA[C>T]CC,A[C>T]C,1
10_64974447,case6_S8,10,case6_S8_A[C>T]G,64974447,N:GA[C>T]GT,A[C>T]G,1
10_65277253,case6_S8,10,case6_S8_T[C>G]C,65277253,N:GT[C>G]CT,T[C>G]C,1
10_65881621,case6_S8,10,case6_S8_C[C>G]C,65881621,N:AC[C>G]CG,C[C>G]C,-1
10_66288787,case6_S8,10,case6_S8_C[T>G]T,66288787,T:TC[T>G]TT,C[T>G]T,1
10_66514483,case6_S8,10,case6_S8_A[T>A]C,66514483,T:AA[T>A]CA,A[T>A]C,1
10_68272507,case6_S8,10,case6_S8_A[T>A]T,68272507,N:AA[T>A]TA,A[T>A]T,-1
10_70549689,case6_S8,10,case6_S8_C[T>C]T,70549689,T:AC[T>C]TC,C[T>C]T,-1
10_71389452,case6_S8,10,case6_S8_C[C>T]A,71389452,N:TC[C>T]AA,C[C>T]A,-1
10_75183056,case6_S8,10,case6_S8_C[C>T]G,75183056,N:CC[C>T]GT,C[C>T]G,-1
10_75988699,case6_S8,10,case6_S8_A[C>T]T,75988699,U:TA[C>T]TC,A[C>T]T,1
10_77105894,case6_S8,10,case6_S8_T[C>A]T,77105894,U:TT[C>A]TT,T[C>A]T,-1
10_78323585,case6_S8,10,case6_S8_C[T>G]T,78323585,N:CC[T>G]TT,C[T>G]T,1
10_80677515,case6_S8,10,case6_S8_G[C>T]G,80677515,N:TG[C>T]GC,G[C>T]G,-1
10_81040185,case6_S8,10,case6_S8_A[C>T]G,81040185,N:AA[C>T]GT,A[C>T]G,-1
10_81699899,case6_S8,10,case6_S8_G[C>A]T,81699899,N:AG[C>A]TA,G[C>A]T,1
10_83227470,case6_S8,10,case6_S8_G[C>T]G,83227470,N:CG[C>T]GG,G[C>T]G,1
10_83623724,case6_S8,10,case6_S8_T[C>G]T,83623724,N:GT[C>G]TG,T[C>G]T,-1
10_85045873,case6_S8,10,case6_S8_G[C>A]A,85045873,N:GG[C>A]AG,G[C>A]A,1
10_85055361,case6_S8,10,case6_S8_C[T>A]G,85055361,N:CC[T>A]GA,C[T>A]G,1
10_85058308,case6_S8,10,case6_S8_A[C>A]A,85058308,N:AA[C>A]AT,A[C>A]A,1
10_85324279,case6_S8,10,case6_S8_T[C>T]A,85324279,N:CT[C>T]AG,T[C>T]A,-1
10_88389317,case6_S8,10,case6_S8_G[T>G]T,88389317,T:GG[T>G]TT,G[T>G]T,1
10_88558677,case6_S8,10,case6_S8_C[C>T]T,88558677,U:GC[C>T]TG,C[C>T]T,-1
10_89445726,case6_S8,10,case6_S8_G[C>T]G,89445726,T:GG[C>T]GA,G[C>T]G,1
10_89888049,case6_S8,10,case6_S8_C[C>T]A,89888049,N:GC[C>T]AG,C[C>T]A,-1
10_90001446,case6_S8,10,case6_S8_C[C>T]C,90001446,N:TC[C>T]CA,C[C>T]C,1
10_90439462,case6_S8,10,case6_S8_T[C>T]G,90439462,N:TT[C>T]GA,T[C>T]G,1
10_90570611,case6_S8,10,case6_S8_A[C>T]G,90570611,N:TA[C>T]GA,A[C>T]G,-1
10_90845136,case6_S8,10,case6_S8_T[C>T]G,90845136,U:AT[C>T]GT,T[C>T]G,-1
10_91101245,case6_S8,10,case6_S8_A[C>T]G,91101245,N:TA[C>T]GT,A[C>T]G,1
10_91834386,case6_S8,10,case6_S8_C[T>C]A,91834386,U:AC[T>C]AT,C[T>C]A,1
10_95041674,case6_S8,10,case6_S8_C[C>T]G,95041674,U:CC[C>T]GA,C[C>T]G,-1
10_101409597,case6_S8,10,case6_S8_C[T>C]A,101409597,U:GC[T>C]AC,C[T>C]A,1
10_104086311,case6_S8,10,case6_S8_C[C>T]T,104086311,N:CC[C>T]TA,C[C>T]T,1
10_104654003,case6_S8,10,case6_S8_C[C>T]C,104654003,T:AC[C>T]CA,C[C>T]C,-1
10_104913341,case6_S8,10,case6_S8_C[T>G]T,104913341,T:AC[T>G]TA,C[T>G]T,-1
10_105020661,case6_S8,10,case6_S8_A[C>T]G,105020661,U:CA[C>T]GG,A[C>T]G,1
10_105806674,case6_S8,10,case6_S8_G[C>A]T,105806674,N:TG[C>A]TT,G[C>A]T,1
10_105832682,case6_S8,10,case6_S8_A[C>T]G,105832682,N:GA[C>T]GG,A[C>T]G,1
10_105848992,case6_S8,10,case6_S8_A[T>G]G,105848992,N:CA[T>G]GT,A[T>G]G,1
10_106007683,case6_S8,10,case6_S8_C[C>T]G,106007683,N:TC[C>T]GT,C[C>T]G,1
10_106197802,case6_S8,10,case6_S8_G[C>T]G,106197802,N:TG[C>T]GC,G[C>T]G,-1
10_106417368,case6_S8,10,case6_S8_A[C>T]G,106417368,N:GA[C>T]GT,A[C>T]G,1
10_106778396,case6_S8,10,case6_S8_G[T>G]T,106778396,T:AG[T>G]TA,G[T>G]T,1
10_106989010,case6_S8,10,case6_S8_C[C>G]A,106989010,T:CC[C>G]AG,C[C>G]A,1
10_107167021,case6_S8,10,case6_S8_C[T>A]T,107167021,N:CC[T>A]TT,C[T>A]T,1
10_107511768,case6_S8,10,case6_S8_T[C>A]T,107511768,N:GT[C>A]TT,T[C>A]T,-1
10_107513900,case6_S8,10,case6_S8_C[T>A]A,107513900,N:AC[T>A]AA,C[T>A]A,1
10_108405926,case6_S8,10,case6_S8_A[C>T]T,108405926,N:GA[C>T]TT,A[C>T]T,1
10_108632800,case6_S8,10,case6_S8_A[T>C]C,108632800,N:CA[T>C]CC,A[T>C]C,1
10_108723657,case6_S8,10,case6_S8_C[C>A]C,108723657,N:TC[C>A]CA,C[C>A]C,1
10_109562882,case6_S8,10,case6_S8_C[C>T]G,109562882,N:TC[C>T]GA,C[C>T]G,-1
10_110171246,case6_S8,10,case6_S8_T[C>A]A,110171246,N:CT[C>A]AC,T[C>A]A,1
10_115513040,case6_S8,10,case6_S8_G[C>T]G,115513040,U:TG[C>T]GA,G[C>T]G,1
10_115690702,case6_S8,10,case6_S8_C[C>T]C,115690702,T:GC[C>T]CT,C[C>T]C,-1
10_122504919,case6_S8,10,case6_S8_C[C>T]C,122504919,T:TC[C>T]CT,C[C>T]C,-1
10_123457671,case6_S8,10,case6_S8_A[C>T]T,123457671,N:TA[C>T]TT,A[C>T]T,1
10_123709269,case6_S8,10,case6_S8_T[C>T]G,123709269,N:TT[C>T]GT,T[C>T]G,-1
10_123793733,case6_S8,10,case6_S8_G[T>C]A,123793733,U:GG[T>C]AG,G[T>C]A,-1
10_124580164,case6_S8,10,case6_S8_A[C>T]G,124580164,T:AA[C>T]GA,A[C>T]G,-1
10_125441719,case6_S8,10,case6_S8_G[C>T]G,125441719,N:GG[C>T]GA,G[C>T]G,-1
10_126647798,case6_S8,10,case6_S8_T[T>C]T,126647798,U:CT[T>C]TC,T[T>C]T,-1
10_126716652,case6_S8,10,case6_S8_C[C>A]A,126716652,N:CC[C>A]AA,C[C>A]A,-1
10_126882030,case6_S8,10,case6_S8_G[C>T]G,126882030,N:TG[C>T]GC,G[C>T]G,1
10_127854124,case6_S8,10,case6_S8_G[T>A]G,127854124,N:GG[T>A]GC,G[T>A]G,1
10_128339225,case6_S8,10,case6_S8_A[C>A]A,128339225,N:TA[C>A]AT,A[C>A]A,1
10_129592674,case6_S8,10,case6_S8_A[C>T]G,129592674,U:CA[C>T]GT,A[C>T]G,1
10_129846680,case6_S8,10,case6_S8_C[C>T]G,129846680,T:GC[C>T]GC,C[C>T]G,1
10_130568441,case6_S8,10,case6_S8_A[C>T]G,130568441,N:CA[C>T]GC,A[C>T]G,1
10_130798066,case6_S8,10,case6_S8_G[C>A]A,130798066,N:GG[C>A]AT,G[C>A]A,1
10_130898835,case6_S8,10,case6_S8_A[C>T]G,130898835,N:GA[C>T]GG,A[C>T]G,-1
10_131169739,case6_S8,10,case6_S8_A[C>A]T,131169739,U:TA[C>A]TG,A[C>A]T,-1
10_131579307,case6_S8,10,case6_S8_C[C>T]G,131579307,N:GC[C>T]GA,C[C>T]G,1
10_132756137,case6_S8,10,case6_S8_C[C>T]G,132756137,T:AC[C>T]GG,C[C>T]G,-1
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