IPMNPDAC_WGS/Data/sigDPC/step1seqProcessed/case7_S4_SBSseqinfo.csv · IPMNPDACpaperArchive

chr_pos,samples,chrs,sampleMut,pos,mutationType,mutationTypeSeq,orientation
10_1125437,case7_S4,10,case7_S4_C[T>A]G,1125437,U:CC[T>A]GA,C[T>A]G,1
10_1305400,case7_S4,10,case7_S4_G[C>T]C,1305400,U:TG[C>T]CC,G[C>T]C,-1
10_1776764,case7_S4,10,case7_S4_A[T>G]T,1776764,N:CA[T>G]TC,A[T>G]T,1
10_2312235,case7_S4,10,case7_S4_T[C>G]T,2312235,N:CT[C>G]TT,T[C>G]T,-1
10_3207206,case7_S4,10,case7_S4_G[C>T]G,3207206,N:TG[C>T]GT,G[C>T]G,1
10_3842365,case7_S4,10,case7_S4_G[T>C]C,3842365,N:GG[T>C]CA,G[T>C]C,1
10_4942436,case7_S4,10,case7_S4_A[C>A]A,4942436,N:TA[C>A]AA,A[C>A]A,1
10_5149449,case7_S4,10,case7_S4_A[T>G]C,5149449,N:AA[T>G]CT,A[T>G]C,-1
10_5795127,case7_S4,10,case7_S4_C[C>T]A,5795127,T:TC[C>T]AA,C[C>T]A,1
10_6624779,case7_S4,10,case7_S4_T[C>T]T,6624779,N:CT[C>T]TA,T[C>T]T,-1
10_7744640,case7_S4,10,case7_S4_A[T>C]C,7744640,U:AA[T>C]CC,A[T>C]C,1
10_9734688,case7_S4,10,case7_S4_T[C>A]C,9734688,N:CT[C>A]CC,T[C>A]C,1
10_9782451,case7_S4,10,case7_S4_C[C>T]T,9782451,N:CC[C>T]TA,C[C>T]T,-1
10_10364070,case7_S4,10,case7_S4_G[C>T]G,10364070,N:GG[C>T]GA,G[C>T]G,-1
10_10470240,case7_S4,10,case7_S4_A[C>T]G,10470240,N:GA[C>T]GG,A[C>T]G,-1
10_10493707,case7_S4,10,case7_S4_A[T>A]G,10493707,N:TA[T>A]GT,A[T>A]G,1
10_10863685,case7_S4,10,case7_S4_A[T>A]C,10863685,T:AA[T>A]CT,A[T>A]C,-1
10_11281486,case7_S4,10,case7_S4_A[C>T]A,11281486,T:CA[C>T]AC,A[C>T]A,-1
10_11650577,case7_S4,10,case7_S4_T[C>G]T,11650577,N:CT[C>G]TT,T[C>G]T,-1
10_12737539,case7_S4,10,case7_S4_A[C>G]T,12737539,T:GA[C>G]TT,A[C>G]T,-1
10_14094352,case7_S4,10,case7_S4_A[C>T]G,14094352,T:AA[C>T]GA,A[C>T]G,1
10_14530319,case7_S4,10,case7_S4_T[C>G]T,14530319,U:TT[C>G]TT,T[C>G]T,-1
10_15055443,case7_S4,10,case7_S4_T[C>A]C,15055443,U:TT[C>A]CC,T[C>A]C,1
10_15660389,case7_S4,10,case7_S4_T[C>A]A,15660389,U:GT[C>A]AG,T[C>A]A,-1
10_15689598,case7_S4,10,case7_S4_A[C>T]G,15689598,T:GA[C>T]GG,A[C>T]G,1
10_15858985,case7_S4,10,case7_S4_T[C>G]T,15858985,U:AT[C>G]TT,T[C>G]T,-1
10_15984492,case7_S4,10,case7_S4_A[T>A]C,15984492,N:AA[T>A]CC,A[T>A]C,1
10_17939829,case7_S4,10,case7_S4_T[C>G]T,17939829,N:AT[C>G]TT,T[C>G]T,1
10_18300869,case7_S4,10,case7_S4_G[C>T]G,18300869,U:AG[C>T]GC,G[C>T]G,1
10_18338175,case7_S4,10,case7_S4_C[C>T]G,18338175,T:CC[C>T]GT,C[C>T]G,-1
10_18691625,case7_S4,10,case7_S4_T[C>A]A,18691625,N:TT[C>A]AT,T[C>A]A,-1
10_19041374,case7_S4,10,case7_S4_T[C>T]G,19041374,N:GT[C>T]GC,T[C>T]G,-1
10_19281157,case7_S4,10,case7_S4_A[T>C]G,19281157,T:TA[T>C]GA,A[T>C]G,-1
10_19285739,case7_S4,10,case7_S4_T[C>T]T,19285739,U:CT[C>T]TT,T[C>T]T,1
10_19479258,case7_S4,10,case7_S4_A[C>A]A,19479258,T:TA[C>A]AA,A[C>A]A,-1
10_20351256,case7_S4,10,case7_S4_T[C>A]A,20351256,N:TT[C>A]AA,T[C>A]A,-1
10_20651183,case7_S4,10,case7_S4_A[T>A]A,20651183,N:CA[T>A]AG,A[T>A]A,-1
10_21379984,case7_S4,10,case7_S4_A[C>T]G,21379984,N:GA[C>T]GT,A[C>T]G,-1
10_23942505,case7_S4,10,case7_S4_T[C>G]T,23942505,T:CT[C>G]TA,T[C>G]T,-1
10_24364406,case7_S4,10,case7_S4_A[T>C]A,24364406,T:AA[T>C]AA,A[T>C]A,-1
10_25471785,case7_S4,10,case7_S4_C[C>A]T,25471785,U:TC[C>A]TT,C[C>A]T,1
10_26128944,case7_S4,10,case7_S4_G[C>A]C,26128944,T:TG[C>A]CT,G[C>A]C,-1
10_26430837,case7_S4,10,case7_S4_C[T>C]C,26430837,N:CC[T>C]CA,C[T>C]C,1
10_28354794,case7_S4,10,case7_S4_A[T>G]G,28354794,N:CA[T>G]GT,A[T>G]G,1
10_28755806,case7_S4,10,case7_S4_T[T>C]A,28755806,N:AT[T>C]AT,T[T>C]A,1
10_30483589,case7_S4,10,case7_S4_G[C>G]C,30483589,N:GG[C>G]CC,G[C>G]C,-1
10_31181009,case7_S4,10,case7_S4_A[T>A]A,31181009,N:CA[T>A]AA,A[T>A]A,-1
10_32383040,case7_S4,10,case7_S4_T[T>A]A,32383040,N:TT[T>A]AA,T[T>A]A,-1
10_34128033,case7_S4,10,case7_S4_T[T>C]G,34128033,T:GT[T>C]GC,T[T>C]G,1
10_36156520,case7_S4,10,case7_S4_A[C>T]G,36156520,N:GA[C>T]GT,A[C>T]G,-1
10_37344007,case7_S4,10,case7_S4_T[C>G]A,37344007,U:AT[C>G]AA,T[C>G]A,1
10_37920626,case7_S4,10,case7_S4_T[C>T]G,37920626,N:CT[C>T]GA,T[C>T]G,-1
10_42710455,case7_S4,10,case7_S4_A[C>A]C,42710455,N:GA[C>A]CT,A[C>A]C,-1
10_45243230,case7_S4,10,case7_S4_T[C>G]T,45243230,N:TT[C>G]TT,T[C>G]T,-1
10_47030269,case7_S4,10,case7_S4_G[C>T]G,47030269,N:GG[C>T]GA,G[C>T]G,1
10_47455327,case7_S4,10,case7_S4_G[C>T]G,47455327,N:TG[C>T]GC,G[C>T]G,1
10_49361082,case7_S4,10,case7_S4_C[C>T]G,49361082,N:AC[C>T]GA,C[C>T]G,1
10_51527436,case7_S4,10,case7_S4_A[C>G]A,51527436,U:AA[C>G]AA,A[C>G]A,1
10_52275161,case7_S4,10,case7_S4_G[C>T]G,52275161,T:GG[C>T]GA,G[C>T]G,-1
10_52680049,case7_S4,10,case7_S4_T[C>A]T,52680049,N:AT[C>A]TC,T[C>A]T,1
10_53484372,case7_S4,10,case7_S4_A[T>C]G,53484372,N:TA[T>C]GA,A[T>C]G,1
10_53966250,case7_S4,10,case7_S4_A[T>A]T,53966250,T:CA[T>A]TT,A[T>A]T,1
10_54165378,case7_S4,10,case7_S4_T[C>T]G,54165378,U:TT[C>T]GG,T[C>T]G,-1
10_54535263,case7_S4,10,case7_S4_T[C>T]A,54535263,T:AT[C>T]AA,T[C>T]A,1
10_54589658,case7_S4,10,case7_S4_C[T>A]T,54589658,T:TC[T>A]TT,C[T>A]T,1
10_54663034,case7_S4,10,case7_S4_C[T>C]T,54663034,U:TC[T>C]TG,C[T>C]T,-1
10_54901108,case7_S4,10,case7_S4_A[C>A]T,54901108,U:AA[C>A]TT,A[C>A]T,-1
10_55015405,case7_S4,10,case7_S4_A[C>T]G,55015405,T:AA[C>T]GC,A[C>T]G,1
10_55720331,case7_S4,10,case7_S4_A[C>A]A,55720331,N:TA[C>A]AA,A[C>A]A,1
10_56048982,case7_S4,10,case7_S4_A[T>C]C,56048982,N:CA[T>C]CA,A[T>C]C,1
10_56118190,case7_S4,10,case7_S4_T[C>G]A,56118190,N:TT[C>G]AG,T[C>G]A,-1
10_56437138,case7_S4,10,case7_S4_C[C>A]C,56437138,N:AC[C>A]CT,C[C>A]C,-1
10_56809261,case7_S4,10,case7_S4_G[C>T]G,56809261,N:TG[C>T]GG,G[C>T]G,1
10_56812455,case7_S4,10,case7_S4_T[C>G]A,56812455,N:CT[C>G]AA,T[C>G]A,-1
10_57005502,case7_S4,10,case7_S4_T[T>C]A,57005502,N:TT[T>C]AT,T[T>C]A,1
10_57077702,case7_S4,10,case7_S4_A[C>T]G,57077702,N:CA[C>T]GT,A[C>T]G,-1
10_57277099,case7_S4,10,case7_S4_T[C>T]A,57277099,N:GT[C>T]AT,T[C>T]A,-1
10_57421280,case7_S4,10,case7_S4_T[C>T]C,57421280,N:AT[C>T]CA,T[C>T]C,-1
10_58198162,case7_S4,10,case7_S4_C[C>T]A,58198162,T:AC[C>T]AT,C[C>T]A,1
10_59187297,case7_S4,10,case7_S4_G[C>T]A,59187297,U:TG[C>T]AT,G[C>T]A,1
10_62661817,case7_S4,10,case7_S4_T[C>G]A,62661817,U:AT[C>G]AG,T[C>G]A,1
10_63298019,case7_S4,10,case7_S4_T[C>T]G,63298019,U:GT[C>T]GC,T[C>T]G,-1
10_63776872,case7_S4,10,case7_S4_G[C>T]T,63776872,N:TG[C>T]TT,G[C>T]T,-1
10_64698593,case7_S4,10,case7_S4_T[C>T]A,64698593,N:TT[C>T]AT,T[C>T]A,-1
10_64808905,case7_S4,10,case7_S4_A[T>C]C,64808905,N:AA[T>C]CT,A[T>C]C,1
10_64898740,case7_S4,10,case7_S4_A[C>G]A,64898740,N:CA[C>G]AG,A[C>G]A,-1
10_65131960,case7_S4,10,case7_S4_T[C>T]C,65131960,N:TT[C>T]CT,T[C>T]C,1
10_65971508,case7_S4,10,case7_S4_T[C>A]T,65971508,U:TT[C>A]TA,T[C>A]T,-1
10_66001130,case7_S4,10,case7_S4_T[T>A]T,66001130,U:AT[T>A]TT,T[T>A]T,-1
10_66679534,case7_S4,10,case7_S4_T[C>A]A,66679534,U:TT[C>A]AG,T[C>A]A,-1
10_66806602,case7_S4,10,case7_S4_C[C>G]T,66806602,U:TC[C>G]TG,C[C>G]T,-1
10_67229013,case7_S4,10,case7_S4_A[C>G]A,67229013,T:AA[C>G]AA,A[C>G]A,1
10_67414848,case7_S4,10,case7_S4_G[C>G]G,67414848,T:TG[C>G]GT,G[C>G]G,1
10_67613210,case7_S4,10,case7_S4_A[C>T]G,67613210,U:TA[C>T]GA,A[C>T]G,-1
10_71243245,case7_S4,10,case7_S4_A[T>G]A,71243245,U:AA[T>G]AA,A[T>G]A,1
10_72754646,case7_S4,10,case7_S4_G[C>T]A,72754646,U:GG[C>T]AG,G[C>T]A,1
10_74197796,case7_S4,10,case7_S4_C[T>C]G,74197796,U:TC[T>C]GT,C[T>C]G,1
10_74286753,case7_S4,10,case7_S4_T[C>T]A,74286753,U:CT[C>T]AG,T[C>T]A,1
10_74940980,case7_S4,10,case7_S4_A[C>T]T,74940980,T:AA[C>T]TT,A[C>T]T,-1
10_76042455,case7_S4,10,case7_S4_C[T>C]T,76042455,U:TC[T>C]TT,C[T>C]T,1
10_76545580,case7_S4,10,case7_S4_A[C>A]A,76545580,U:CA[C>A]AT,A[C>A]A,1
10_77045353,case7_S4,10,case7_S4_G[C>T]T,77045353,T:AG[C>T]TG,G[C>T]T,1
10_78955560,case7_S4,10,case7_S4_T[C>T]C,78955560,N:TT[C>T]CC,T[C>T]C,-1
10_79034464,case7_S4,10,case7_S4_G[C>A]T,79034464,N:GG[C>A]TC,G[C>A]T,-1
10_79839454,case7_S4,10,case7_S4_T[C>T]G,79839454,N:AT[C>T]GA,T[C>T]G,-1
10_79893172,case7_S4,10,case7_S4_G[C>T]C,79893172,N:CG[C>T]CA,G[C>T]C,1
10_80168285,case7_S4,10,case7_S4_C[C>G]G,80168285,T:AC[C>G]GA,C[C>G]G,1
10_80768959,case7_S4,10,case7_S4_C[T>C]C,80768959,N:TC[T>C]CA,C[T>C]C,-1
10_81002874,case7_S4,10,case7_S4_C[T>G]C,81002874,N:AC[T>G]CT,C[T>G]C,-1
10_81331405,case7_S4,10,case7_S4_G[C>A]C,81331405,N:GG[C>A]CA,G[C>A]C,-1
10_81831201,case7_S4,10,case7_S4_A[C>G]C,81831201,N:CA[C>G]CA,A[C>G]C,-1
10_82460246,case7_S4,10,case7_S4_T[T>C]A,82460246,U:CT[T>C]AA,T[T>C]A,1
10_82613911,case7_S4,10,case7_S4_A[T>G]A,82613911,T:AA[T>G]AA,A[T>G]A,-1
10_82658982,case7_S4,10,case7_S4_C[T>A]C,82658982,T:CC[T>A]CA,C[T>A]C,-1
10_82963027,case7_S4,10,case7_S4_T[C>A]C,82963027,T:AT[C>A]CT,T[C>A]C,-1
10_83298813,case7_S4,10,case7_S4_T[T>G]T,83298813,N:CT[T>G]TT,T[T>G]T,-1
10_83841860,case7_S4,10,case7_S4_T[T>A]C,83841860,N:GT[T>A]CA,T[T>A]C,1
10_83928522,case7_S4,10,case7_S4_A[C>A]G,83928522,N:TA[C>A]GT,A[C>A]G,-1
10_83944608,case7_S4,10,case7_S4_C[T>C]G,83944608,N:TC[T>C]GT,C[T>C]G,-1
10_85393404,case7_S4,10,case7_S4_A[C>T]G,85393404,N:GA[C>T]GA,A[C>T]G,1
10_85588036,case7_S4,10,case7_S4_T[C>G]T,85588036,N:TT[C>G]TT,T[C>G]T,-1
10_86204037,case7_S4,10,case7_S4_A[C>A]C,86204037,U:TA[C>A]CT,A[C>A]C,-1
10_86363154,case7_S4,10,case7_S4_T[C>T]T,86363154,U:CT[C>T]TG,T[C>T]T,-1
10_90176742,case7_S4,10,case7_S4_T[C>T]C,90176742,N:AT[C>T]CC,T[C>T]C,-1
10_90508924,case7_S4,10,case7_S4_G[T>A]C,90508924,N:AG[T>A]CA,G[T>A]C,1
10_90874949,case7_S4,10,case7_S4_A[T>G]A,90874949,U:AA[T>G]AA,A[T>G]A,1
10_92499928,case7_S4,10,case7_S4_A[C>T]G,92499928,T:TA[C>T]GC,A[C>T]G,1
10_94228436,case7_S4,10,case7_S4_T[T>G]T,94228436,T:TT[T>G]TT,T[T>G]T,-1
10_95432539,case7_S4,10,case7_S4_C[C>T]G,95432539,T:AC[C>T]GC,C[C>T]G,1
10_96465321,case7_S4,10,case7_S4_T[C>T]T,96465321,T:AT[C>T]TA,T[C>T]T,1
10_97866192,case7_S4,10,case7_S4_C[C>T]G,97866192,B:CC[C>T]GG,C[C>T]G,1
10_97877583,case7_S4,10,case7_S4_A[C>T]G,97877583,T:TA[C>T]GC,A[C>T]G,1
10_97964166,case7_S4,10,case7_S4_C[C>G]A,97964166,T:AC[C>G]AA,C[C>G]A,1
10_98855707,case7_S4,10,case7_S4_A[C>T]A,98855707,T:CA[C>T]AA,A[C>T]A,1
10_98955353,case7_S4,10,case7_S4_T[T>A]A,98955353,T:TT[T>A]AA,T[T>A]A,1
10_99136544,case7_S4,10,case7_S4_T[C>T]G,99136544,U:AT[C>T]GT,T[C>T]G,-1
10_99764412,case7_S4,10,case7_S4_T[T>C]T,99764412,N:TT[T>C]TT,T[T>C]T,-1
10_100202004,case7_S4,10,case7_S4_G[C>T]T,100202004,T:TG[C>T]TC,G[C>T]T,1
10_103851948,case7_S4,10,case7_S4_C[C>G]T,103851948,T:AC[C>G]TG,C[C>G]T,1
10_104016229,case7_S4,10,case7_S4_T[C>T]T,104016229,T:TT[C>T]TC,T[C>T]T,-1
10_104853026,case7_S4,10,case7_S4_G[C>T]G,104853026,T:CG[C>T]GC,G[C>T]G,-1
10_105147734,case7_S4,10,case7_S4_G[C>A]C,105147734,T:GG[C>A]CA,G[C>A]C,-1
10_105306308,case7_S4,10,case7_S4_A[T>A]T,105306308,N:GA[T>A]TG,A[T>A]T,-1
10_105407053,case7_S4,10,case7_S4_T[C>G]T,105407053,N:GT[C>G]TT,T[C>G]T,1
10_105504029,case7_S4,10,case7_S4_A[T>C]C,105504029,N:AA[T>C]CC,A[T>C]C,1
10_106722328,case7_S4,10,case7_S4_G[C>T]G,106722328,T:AG[C>T]GC,G[C>T]G,1
10_107061644,case7_S4,10,case7_S4_G[C>A]C,107061644,U:AG[C>A]CT,G[C>A]C,-1
10_107265391,case7_S4,10,case7_S4_A[C>T]G,107265391,N:TA[C>T]GT,A[C>T]G,1
10_107347115,case7_S4,10,case7_S4_G[T>G]A,107347115,N:TG[T>G]AT,G[T>G]A,1
10_107562696,case7_S4,10,case7_S4_T[C>G]A,107562696,N:GT[C>G]AC,T[C>G]A,1
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