IPMNPDAC_WGS/Data/sigDPC/step1seqProcessed/case9_S4_SBSseqinfo.csv · IPMNPDACpaperArchive

chr_pos,samples,chrs,sampleMut,pos,mutationType,mutationTypeSeq,orientation
10_1836840,case9_S4,10,case9_S4_T[C>T]G,1836840,N:GT[C>T]GT,T[C>T]G,1
10_1960926,case9_S4,10,case9_S4_A[T>A]T,1960926,N:TA[T>A]TT,A[T>A]T,1
10_2277234,case9_S4,10,case9_S4_T[C>T]G,2277234,N:GT[C>T]GG,T[C>T]G,1
10_2786735,case9_S4,10,case9_S4_G[C>T]C,2786735,N:AG[C>T]CA,G[C>T]C,1
10_3171691,case9_S4,10,case9_S4_C[C>T]A,3171691,U:GC[C>T]AA,C[C>T]A,-1
10_8225628,case9_S4,10,case9_S4_C[C>A]C,8225628,N:CC[C>A]CA,C[C>A]C,-1
10_9141346,case9_S4,10,case9_S4_G[C>T]G,9141346,N:AG[C>T]GC,G[C>T]G,-1
10_9625065,case9_S4,10,case9_S4_A[T>G]A,9625065,N:AA[T>G]AG,A[T>G]A,1
10_9782603,case9_S4,10,case9_S4_T[C>A]C,9782603,N:CT[C>A]CT,T[C>A]C,1
10_9835198,case9_S4,10,case9_S4_C[T>C]G,9835198,N:CC[T>C]GG,C[T>C]G,1
10_10114013,case9_S4,10,case9_S4_C[T>C]T,10114013,N:TC[T>C]TT,C[T>C]T,1
10_10446344,case9_S4,10,case9_S4_C[C>T]G,10446344,N:TC[C>T]GT,C[C>T]G,1
10_10460152,case9_S4,10,case9_S4_T[C>A]A,10460152,N:CT[C>A]AG,T[C>A]A,1
10_10555150,case9_S4,10,case9_S4_C[T>A]T,10555150,N:TC[T>A]TT,C[T>A]T,-1
10_10733275,case9_S4,10,case9_S4_T[C>T]G,10733275,N:CT[C>T]GG,T[C>T]G,1
10_10783752,case9_S4,10,case9_S4_C[C>T]A,10783752,N:GC[C>T]AA,C[C>T]A,1
10_10880794,case9_S4,10,case9_S4_C[T>G]G,10880794,U:TC[T>G]GC,C[T>G]G,1
10_11030384,case9_S4,10,case9_S4_T[C>A]A,11030384,U:CT[C>A]AT,T[C>A]A,1
10_11051402,case9_S4,10,case9_S4_A[T>A]C,11051402,U:AA[T>A]CT,A[T>A]C,1
10_11894175,case9_S4,10,case9_S4_T[C>T]G,11894175,N:CT[C>T]GC,T[C>T]G,-1
10_12283315,case9_S4,10,case9_S4_T[C>A]A,12283315,N:GT[C>A]AT,T[C>A]A,-1
10_12718756,case9_S4,10,case9_S4_G[T>C]T,12718756,U:GG[T>C]TT,G[T>C]T,1
10_12814035,case9_S4,10,case9_S4_C[C>T]G,12814035,U:CC[C>T]GC,C[C>T]G,1
10_13534736,case9_S4,10,case9_S4_T[C>T]A,13534736,N:CT[C>T]AC,T[C>T]A,1
10_14072592,case9_S4,10,case9_S4_T[C>G]C,14072592,T:TT[C>G]CA,T[C>G]C,1
10_15971003,case9_S4,10,case9_S4_G[C>T]G,15971003,N:GG[C>T]GG,G[C>T]G,-1
10_16023833,case9_S4,10,case9_S4_G[C>T]G,16023833,N:GG[C>T]GG,G[C>T]G,-1
10_16434717,case9_S4,10,case9_S4_G[C>T]G,16434717,N:TG[C>T]GG,G[C>T]G,1
10_17533137,case9_S4,10,case9_S4_A[C>T]G,17533137,N:CA[C>T]GC,A[C>T]G,1
10_19551738,case9_S4,10,case9_S4_G[T>C]A,19551738,U:TG[T>C]AT,G[T>C]A,1
10_19741428,case9_S4,10,case9_S4_C[C>T]G,19741428,N:AC[C>T]GC,C[C>T]G,1
10_20233126,case9_S4,10,case9_S4_G[C>A]A,20233126,T:CG[C>A]AT,G[C>A]A,-1
10_20347784,case9_S4,10,case9_S4_G[C>T]G,20347784,N:TG[C>T]GG,G[C>T]G,1
10_20391195,case9_S4,10,case9_S4_T[T>C]C,20391195,N:AT[T>C]CT,T[T>C]C,-1
10_21405801,case9_S4,10,case9_S4_G[C>T]C,21405801,N:GG[C>T]CA,G[C>T]C,-1
10_21620850,case9_S4,10,case9_S4_C[C>A]T,21620850,U:GC[C>A]TG,C[C>A]T,1
10_21771831,case9_S4,10,case9_S4_G[C>T]A,21771831,U:AG[C>T]AG,G[C>T]A,-1
10_23468742,case9_S4,10,case9_S4_T[T>A]T,23468742,N:AT[T>A]TT,T[T>A]T,1
10_23690006,case9_S4,10,case9_S4_G[C>A]T,23690006,N:TG[C>A]TC,G[C>A]T,1
10_25187244,case9_S4,10,case9_S4_G[C>T]G,25187244,U:GG[C>T]GT,G[C>T]G,1
10_25370162,case9_S4,10,case9_S4_A[T>C]T,25370162,U:TA[T>C]TT,A[T>C]T,1
10_25497541,case9_S4,10,case9_S4_G[T>C]C,25497541,T:TG[T>C]CT,G[T>C]C,-1
10_25516430,case9_S4,10,case9_S4_A[C>T]G,25516430,U:GA[C>T]GT,A[C>T]G,1
10_25560382,case9_S4,10,case9_S4_T[C>T]A,25560382,U:CT[C>T]AG,T[C>T]A,1
10_25847717,case9_S4,10,case9_S4_G[C>T]G,25847717,N:CG[C>T]GC,G[C>T]G,1
10_26224564,case9_S4,10,case9_S4_A[T>A]T,26224564,U:TA[T>A]TT,A[T>A]T,1
10_26294767,case9_S4,10,case9_S4_G[C>T]G,26294767,T:TG[C>T]GA,G[C>T]G,-1
10_26634823,case9_S4,10,case9_S4_C[C>A]C,26634823,N:CC[C>A]CC,C[C>A]C,-1
10_28020921,case9_S4,10,case9_S4_T[T>G]A,28020921,N:CT[T>G]AT,T[T>G]A,1
10_28186418,case9_S4,10,case9_S4_T[C>G]T,28186418,T:TT[C>G]TA,T[C>G]T,1
10_28773398,case9_S4,10,case9_S4_G[C>G]C,28773398,N:TG[C>G]CC,G[C>G]C,-1
10_31788453,case9_S4,10,case9_S4_A[C>T]C,31788453,N:TA[C>T]CT,A[C>T]C,-1
10_33475166,case9_S4,10,case9_S4_T[T>C]T,33475166,N:AT[T>C]TT,T[T>C]T,1
10_33974409,case9_S4,10,case9_S4_G[T>C]T,33974409,N:GG[T>C]TT,G[T>C]T,-1
10_35480509,case9_S4,10,case9_S4_C[C>T]G,35480509,U:GC[C>T]GA,C[C>T]G,1
10_36509798,case9_S4,10,case9_S4_A[C>T]G,36509798,N:TA[C>T]GT,A[C>T]G,-1
10_37013272,case9_S4,10,case9_S4_A[C>A]T,37013272,N:TA[C>A]TT,A[C>A]T,-1
10_37036785,case9_S4,10,case9_S4_T[C>A]A,37036785,N:TT[C>A]AA,T[C>A]A,-1
10_37250516,case9_S4,10,case9_S4_A[C>T]G,37250516,T:GA[C>T]GT,A[C>T]G,-1
10_37263105,case9_S4,10,case9_S4_T[C>T]G,37263105,U:TT[C>T]GT,T[C>T]G,1
10_37799999,case9_S4,10,case9_S4_C[T>G]T,37799999,U:TC[T>G]TG,C[T>G]T,-1
10_37905864,case9_S4,10,case9_S4_A[C>A]A,37905864,N:AA[C>A]AT,A[C>A]A,1
10_39451772,case9_S4,10,case9_S4_G[C>T]G,39451772,N:GG[C>T]GG,G[C>T]G,1
10_44431997,case9_S4,10,case9_S4_T[C>T]T,44431997,N:CT[C>T]TT,T[C>T]T,1
10_44589363,case9_S4,10,case9_S4_G[C>T]G,44589363,N:CG[C>T]GC,G[C>T]G,-1
10_44746554,case9_S4,10,case9_S4_G[T>C]T,44746554,N:GG[T>C]TT,G[T>C]T,-1
10_44929534,case9_S4,10,case9_S4_C[C>T]C,44929534,U:TC[C>T]CG,C[C>T]C,1
10_45362326,case9_S4,10,case9_S4_G[C>T]G,45362326,N:TG[C>T]GA,G[C>T]G,1
10_45807717,case9_S4,10,case9_S4_T[T>C]A,45807717,N:TT[T>C]AT,T[T>C]A,1
10_49506298,case9_S4,10,case9_S4_C[C>T]T,49506298,U:CC[C>T]TT,C[C>T]T,-1
10_53332948,case9_S4,10,case9_S4_C[T>A]C,53332948,N:CC[T>A]CA,C[T>A]C,-1
10_53747427,case9_S4,10,case9_S4_A[T>G]G,53747427,N:TA[T>G]GT,A[T>G]G,1
10_53854466,case9_S4,10,case9_S4_G[C>T]G,53854466,U:TG[C>T]GA,G[C>T]G,-1
10_53887113,case9_S4,10,case9_S4_T[C>A]A,53887113,T:TT[C>A]AT,T[C>A]A,1
10_55194155,case9_S4,10,case9_S4_T[T>C]C,55194155,U:GT[T>C]CT,T[T>C]C,-1
10_55240748,case9_S4,10,case9_S4_A[C>T]T,55240748,T:TA[C>T]TT,A[C>T]T,1
10_55662338,case9_S4,10,case9_S4_C[T>G]T,55662338,N:GC[T>G]TA,C[T>G]T,1
10_55958706,case9_S4,10,case9_S4_T[T>A]G,55958706,N:AT[T>A]GT,T[T>A]G,-1
10_56213864,case9_S4,10,case9_S4_T[C>T]T,56213864,N:CT[C>T]TC,T[C>T]T,1
10_56221230,case9_S4,10,case9_S4_G[T>C]T,56221230,N:AG[T>C]TA,G[T>C]T,1
10_57029686,case9_S4,10,case9_S4_T[C>T]T,57029686,N:CT[C>T]TC,T[C>T]T,1
10_57351082,case9_S4,10,case9_S4_T[C>T]T,57351082,N:CT[C>T]TC,T[C>T]T,-1
10_59047705,case9_S4,10,case9_S4_T[T>A]A,59047705,N:AT[T>A]AT,T[T>A]A,1
10_59202355,case9_S4,10,case9_S4_A[T>C]T,59202355,U:AA[T>C]TT,A[T>C]T,1
10_59396171,case9_S4,10,case9_S4_T[T>G]C,59396171,N:AT[T>G]CA,T[T>G]C,1
10_60553635,case9_S4,10,case9_S4_C[T>A]C,60553635,T:GC[T>A]CA,C[T>A]C,1
10_64129528,case9_S4,10,case9_S4_T[C>T]T,64129528,N:AT[C>T]TG,T[C>T]T,1
10_64941782,case9_S4,10,case9_S4_A[T>C]T,64941782,N:TA[T>C]TT,A[T>C]T,-1
10_65886495,case9_S4,10,case9_S4_G[C>T]G,65886495,N:GG[C>T]GT,G[C>T]G,-1
10_66996453,case9_S4,10,case9_S4_G[C>G]T,66996453,B:GG[C>G]TG,G[C>G]T,1
10_67249520,case9_S4,10,case9_S4_A[T>A]C,67249520,T:AA[T>A]CA,A[T>A]C,1
10_71479478,case9_S4,10,case9_S4_T[T>C]G,71479478,U:CT[T>C]GC,T[T>C]G,1
10_72170074,case9_S4,10,case9_S4_T[C>T]G,72170074,T:AT[C>T]GT,T[C>T]G,1
10_72637217,case9_S4,10,case9_S4_G[C>T]G,72637217,N:GG[C>T]GG,G[C>T]G,1
10_73906174,case9_S4,10,case9_S4_T[C>A]C,73906174,N:GT[C>A]CT,T[C>A]C,-1
10_75486287,case9_S4,10,case9_S4_A[T>A]A,75486287,T:GA[T>A]AC,A[T>A]A,-1
10_76818931,case9_S4,10,case9_S4_G[C>T]G,76818931,N:GG[C>T]GC,G[C>T]G,1
10_77722925,case9_S4,10,case9_S4_C[T>G]G,77722925,N:AC[T>G]GT,C[T>G]G,-1
10_78374567,case9_S4,10,case9_S4_A[C>A]C,78374567,N:CA[C>A]CT,A[C>A]C,-1
10_78697325,case9_S4,10,case9_S4_T[T>A]A,78697325,N:TT[T>A]AA,T[T>A]A,-1
10_80376957,case9_S4,10,case9_S4_A[C>T]C,80376957,N:CA[C>T]CA,A[C>T]C,1
10_80886091,case9_S4,10,case9_S4_T[T>A]T,80886091,N:GT[T>A]TT,T[T>A]T,-1
10_81476814,case9_S4,10,case9_S4_T[T>C]A,81476814,N:TT[T>C]AA,T[T>C]A,1
10_82251650,case9_S4,10,case9_S4_C[T>A]A,82251650,T:TC[T>A]AC,C[T>A]A,-1
10_82774067,case9_S4,10,case9_S4_G[T>C]A,82774067,U:TG[T>C]AT,G[T>C]A,1
10_82790094,case9_S4,10,case9_S4_A[T>C]T,82790094,T:CA[T>C]TA,A[T>C]T,-1
10_82970700,case9_S4,10,case9_S4_T[T>A]A,82970700,U:CT[T>A]AA,T[T>A]A,1
10_83491494,case9_S4,10,case9_S4_C[C>A]C,83491494,N:CC[C>A]CA,C[C>A]C,1
10_84727025,case9_S4,10,case9_S4_G[T>A]A,84727025,N:GG[T>A]AA,G[T>A]A,-1
10_84730211,case9_S4,10,case9_S4_C[C>G]C,84730211,N:AC[C>G]CT,C[C>G]C,1
10_84802186,case9_S4,10,case9_S4_A[C>T]A,84802186,N:AA[C>T]AA,A[C>T]A,-1
10_84840308,case9_S4,10,case9_S4_A[C>T]A,84840308,N:AA[C>T]AT,A[C>T]A,1
10_84933518,case9_S4,10,case9_S4_G[C>T]G,84933518,N:GG[C>T]GG,G[C>T]G,-1
10_85836686,case9_S4,10,case9_S4_C[T>G]C,85836686,T:GC[T>G]CA,C[T>G]C,1
10_86135921,case9_S4,10,case9_S4_C[C>T]C,86135921,T:CC[C>T]CA,C[C>T]C,1
10_87244441,case9_S4,10,case9_S4_C[C>T]G,87244441,N:TC[C>T]GG,C[C>T]G,-1
10_90100952,case9_S4,10,case9_S4_A[T>A]G,90100952,N:AA[T>A]GT,A[T>A]G,1
10_90540532,case9_S4,10,case9_S4_C[C>A]T,90540532,N:TC[C>A]TG,C[C>A]T,1
10_92760928,case9_S4,10,case9_S4_C[C>G]A,92760928,N:GC[C>G]AA,C[C>G]A,-1
10_92910656,case9_S4,10,case9_S4_G[C>T]G,92910656,U:GG[C>T]GG,G[C>T]G,1
10_94634459,case9_S4,10,case9_S4_G[T>C]A,94634459,N:TG[T>C]AA,G[T>C]A,-1
10_98635946,case9_S4,10,case9_S4_A[T>A]A,98635946,T:CA[T>A]AT,A[T>A]A,1
10_98895104,case9_S4,10,case9_S4_G[T>C]A,98895104,U:GG[T>C]AT,G[T>C]A,-1
10_99010673,case9_S4,10,case9_S4_G[C>T]T,99010673,U:AG[C>T]TA,G[C>T]T,-1
10_104974930,case9_S4,10,case9_S4_G[T>A]A,104974930,U:AG[T>A]AT,G[T>A]A,1
10_104994298,case9_S4,10,case9_S4_T[C>G]T,104994298,U:AT[C>G]TA,T[C>G]T,1
10_105127706,case9_S4,10,case9_S4_G[T>A]C,105127706,T:GG[T>A]CC,G[T>A]C,-1
10_105435627,case9_S4,10,case9_S4_C[T>C]T,105435627,N:AC[T>C]TC,C[T>C]T,1
10_105557446,case9_S4,10,case9_S4_T[T>A]T,105557446,N:AT[T>A]TA,T[T>A]T,1
10_105743469,case9_S4,10,case9_S4_C[C>T]T,105743469,N:TC[C>T]TT,C[C>T]T,-1
10_105744867,case9_S4,10,case9_S4_T[C>T]C,105744867,N:TT[C>T]CC,T[C>T]C,1
10_105941487,case9_S4,10,case9_S4_T[C>A]C,105941487,N:TT[C>A]CA,T[C>A]C,1
10_106147952,case9_S4,10,case9_S4_A[T>C]G,106147952,N:CA[T>C]GC,A[T>C]G,1
10_107258130,case9_S4,10,case9_S4_A[C>A]A,107258130,N:AA[C>A]AT,A[C>A]A,1
10_107343013,case9_S4,10,case9_S4_A[C>T]G,107343013,N:AA[C>T]GA,A[C>T]G,1
10_107375040,case9_S4,10,case9_S4_A[C>T]G,107375040,N:TA[C>T]GT,A[C>T]G,-1
10_108265181,case9_S4,10,case9_S4_A[C>T]G,108265181,N:CA[C>T]GC,A[C>T]G,-1
10_109047427,case9_S4,10,case9_S4_C[C>T]T,109047427,N:TC[C>T]TG,C[C>T]T,-1
10_109202984,case9_S4,10,case9_S4_G[C>T]G,109202984,N:GG[C>T]GG,G[C>T]G,-1
10_109533583,case9_S4,10,case9_S4_C[C>T]G,109533583,N:CC[C>T]GG,C[C>T]G,1
10_111283971,case9_S4,10,case9_S4_T[C>G]T,111283971,N:CT[C>G]TG,T[C>G]T,1
10_111490792,case9_S4,10,case9_S4_T[C>T]C,111490792,N:GT[C>T]CT,T[C>T]C,1
10_111932186,case9_S4,10,case9_S4_T[C>T]G,111932186,N:AT[C>T]GG,T[C>T]G,-1
10_114015834,case9_S4,10,case9_S4_G[C>T]A,114015834,N:AG[C>T]AA,G[C>T]A,1
10_114889813,case9_S4,10,case9_S4_G[C>G]T,114889813,U:AG[C>G]TT,G[C>G]T,1
10_115540586,case9_S4,10,case9_S4_C[C>A]C,115540586,U:AC[C>A]CC,C[C>A]C,1
10_116189563,case9_S4,10,case9_S4_A[C>A]T,116189563,U:AA[C>A]TT,A[C>A]T,-1
10_120043533,case9_S4,10,case9_S4_G[C>T]G,120043533,N:GG[C>T]GG,G[C>T]G,-1
10_120122720,case9_S4,10,case9_S4_G[C>T]G,120122720,N:AG[C>T]GA,G[C>T]G,1
10_121189004,case9_S4,10,case9_S4_A[C>G]A,121189004,N:GA[C>G]AG,A[C>G]A,1
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