typeTumorSample,tumorSample,sampleTumor,cases,samples,tumor,tumorType,CHROM,START,END,SVLEN,svclass,CHR2,rgn,rgnno,rgnnc,gene,tid,PASS,CHROM_POS,SVTYPE,CHROM_POS_SVTYPE,CHROM_POS_SVTYPE.1
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr1,30972446,124106275,93133829,translocation,9,intron,10,22,PUM1,ENST00000426105,True,1_30972446,26,1_30972446_26,1_30972446_26
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr1,42384647,105963307,63578660,deletion,1,intron,1,5,RIMKLA,ENST00000431473,True,1_42384647,31,1_42384647_31,1_42384647_31
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr1,55385642,60423879,5038237,translocation,4,,-1,-1,,,True,1_55385642,37,1_55385642_37,1_55385642_37
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr1,189277896,125333503,-63944393,translocation,8,,-1,-1,,,True,1_189277896,101,1_189277896_101,1_189277896_101
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr1,236756178,236756674,496,deletion,1,intron,17,21,ACTN2,ENST00000542672,True,1_236756178,130,1_236756178_130,1_236756178_130
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr1,242951657,61425946,-181525711,translocation,16,,-1,-1,,,True,1_242951657,133,1_242951657_133,1_242951657_133
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr2,102886901,39926756,-62960145,translocation,6,intron,4,6,TMEM182,ENST00000640575,True,2_102886901,1622,2_102886901_1622,2_102886901_1622
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr3,44482058,138304062,93822004,translocation,4,,-1,-1,,,True,3_44482058,1644,3_44482058_1644,3_44482058_1644
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr3,197301319,32501888,-164799431,translocation,6,,-1,-1,,,True,3_197301319,1682,3_197301319_1682,3_197301319_1682
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr4,49146905,49147976,1071,deletion,4,,-1,-1,,,True,4_49146905,1739,4_49146905_1739,4_49146905_1739
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr5,21047396,21374964,327568,inversion,5,,-1,-1,,,True,5_21047396,1810,5_21047396_1810,5_21047396_1810
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr5,49723595,49958077,234482,deletion,5,,-1,-1,,,True,5_49723595,1814,5_49723595_1814,5_49723595_1814
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr5,92261146,90701271,-1559875,translocation,7,UTRintron,2,4,AC114316.2,ENST00000507217,True,5_92261146,1816,5_92261146_1816,5_92261146_1816
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr5,164380267,154525159,-9855108,translocation,6,,-1,-1,,,True,5_164380267,1819,5_164380267_1819,5_164380267_1819
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr5,176305635,42285599,-134020036,translocation,X,intron,4,10,SIMC1,ENST00000429602,True,5_176305635,1821,5_176305635_1821,5_176305635_1821
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr6,32486358,116937696,84451338,inversion,6,,-1,-1,,,True,6_32486358,1831,6_32486358_1831,6_32486358_1831
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr6,82934946,115095461,32160515,translocation,9,intron,9,10,UBE3D,ENST00000369747,True,6_82934946,1837,6_82934946_1837,6_82934946_1837
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr6,108293558,85833233,-22460325,translocation,8,,-1,-1,,,True,6_108293558,1838,6_108293558_1838,6_108293558_1838
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr9,21581046,32372710,10791664,deletion,9,,-1,-1,,,True,9_21581046,1876,9_21581046_1876,9_21581046_1876
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr10,6369616,99009073,92639457,translocation,X,,-1,-1,,,True,10_6369616,1895,10_6369616_1895,10_6369616_1895
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,43183,47324444,47281261,translocation,X,,-1,-1,,,True,12_43183,1926,12_43183_1926,12_43183_1926
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057591,45968441,-20089150,translocation,5,,-1,-1,,,True,12_66057591,1812,12_66057591_1812,12_66057591_1812
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057591,26095065,-39962526,translocation,8,,-1,-1,,,True,12_66057591,1866,12_66057591_1866,12_66057591_1866
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057592,49150408,-16907184,translocation,4,,-1,-1,,,True,12_66057592,1748,12_66057592_1748,12_66057592_1748
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057592,35662319,-30395273,translocation,7,,-1,-1,,,True,12_66057592,1850,12_66057592_1850,12_66057592_1850
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057592,24849694,-41207898,translocation,20,,-1,-1,,,True,12_66057592,1930,12_66057592_1930,12_66057592_1930
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057592,31073275,-34984317,translocation,20,,-1,-1,,,True,12_66057592,1931,12_66057592_1931,12_66057592_1931
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,66057592,11747742,-54309850,translocation,Y,,-1,-1,,,True,12_66057592,1933,12_66057592_1933,12_66057592_1933
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr12,132234171,132234988,817,deletion,12,intron,6,11,GALNT9,ENST00000328957,True,12_132234171,1942,12_132234171_1942,12_132234171_1942
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr15,36473322,36886670,413348,translocation,19,,-1,-1,,,True,15_36473322,1961,15_36473322_1961,15_36473322_1961
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr15,59610944,39926801,-19684143,translocation,6,5UTRintron,2,5,GCNT3,ENST00000559189,True,15_59610944,1834,15_59610944_1834,15_59610944_1834
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr17,220890,221498,608,deletion,17,intron,6,9,RPH3AL,ENST00000323434,True,17_220890,1985,17_220890_1985,17_220890_1985
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr17,21680635,21681798,1163,deletion,17,,-1,-1,,,True,17_21680635,1992,17_21680635_1992,17_21680635_1992
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr17,42262761,118084459,75821698,translocation,9,5UTRintron,1,19,STAT5B,ENST00000293328,True,17_42262761,1883,17_42262761_1883,17_42262761_1883
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr17,66799370,6995496,-59803874,translocation,19,intron,16,17,PRKCA,ENST00000413366,True,17_66799370,2016,17_66799370_2016,17_66799370_2016
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr18,21895169,21907563,12394,deletion,18,,-1,-1,,,True,18_21895169,2027,18_21895169_2027,18_21895169_2027
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr19,21551433,31329581,9778148,translocation,6,intron,1,2,ZNF429,ENST00000594385,True,19_21551433,1827,19_21551433_1827,19_21551433_1827
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chr20,26631417,104563522,77932105,translocation,7,,-1,-1,,,True,20_26631417,1859,20_26631417_1859,20_26631417_1859
t2_IPMN_LGD_case10_S2,IPMN_LGD_case10_S2,case10_S2_IPMN_LGD,case10,case10_S2,IPMN_LGD,t2,chrX,999755,10774984,9775229,translocation,Y,,-1,-1,,,True,X_999755,2085,X_999755_2085,X_999755_2085
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr1,40201184,66057592,25856408,translocation,12,intron,4,8,RLF,ENST00000372771,True,1_40201184,23,1_40201184_23,1_40201184_23
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr1,182138476,206781603,24643127,translocation,2,UTRintron,10,17,LINC01344,ENST00000608183,True,1_182138476,75,1_182138476_75,1_182138476_75
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr9,761506,2118952,1357446,deletion,9,,-1,-1,,,True,9_761506,913,9_761506_913,9_761506_913
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr9,7212761,12113867,4901106,inversion,9,,-1,-1,,,True,9_7212761,914,9_7212761_914,9_7212761_914
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr9,11925394,32529916,20604522,inversion,9,,-1,-1,,,True,9_11925394,915,9_11925394_915,9_11925394_915
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr9,21580998,32372710,10791712,deletion,9,,-1,-1,,,True,9_21580998,916,9_21580998_916,9_21580998_916
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr9,35751500,35754033,2533,deletion,9,intron,6,9,RGP1,ENST00000378078,True,9_35751500,917,9_35751500_917,9_35751500_917
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr9,99797116,122435578,22638462,translocation,X,UTRintron,2,7,AL359710.1,ENST00000427039,True,9_99797116,926,9_99797116_926,9_99797116_926
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr12,66057591,196811253,130753662,translocation,3,,-1,-1,,,True,12_66057591,878,12_66057591_878,12_66057591_878
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr12,66057591,56503573,-9554018,translocation,18,,-1,-1,,,True,12_66057591,936,12_66057591_936,12_66057591_936
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr12,66057592,26094946,-39962646,translocation,8,,-1,-1,,,True,12_66057592,910,12_66057592_910,12_66057592_910
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr12,66057592,10736319,-55321273,translocation,21,,-1,-1,,,True,12_66057592,937,12_66057592_937,12_66057592_937
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr12,123973883,3884044,-120089839,translocation,2,5UTRintron,1,5,RFLNA,ENST00000389727,True,12_123973883,115,12_123973883_115,12_123973883_115
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr15,36473287,36886670,413383,translocation,19,,-1,-1,,,True,15_36473287,944,15_36473287_944,15_36473287_944
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr15,61772706,96557061,34784355,inversion,15,,-1,-1,,,True,15_61772706,945,15_61772706_945,15_61772706_945
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr17,220781,221533,752,deletion,17,intron,6,9,RPH3AL,ENST00000323434,True,17_220781,947,17_220781_947,17_220781_947
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr20,30900549,12693940,-18206609,translocation,22,,-1,-1,,,True,20_30900549,966,20_30900549_966,20_30900549_966
t2_IPMN_LGD_case10_S5,IPMN_LGD_case10_S5,case10_S5_IPMN_LGD,case10,case10_S5,IPMN_LGD,t2,chr22,25820045,185827049,160007004,translocation,4,intron,12,44,MYO18B,ENST00000335473,True,22_25820045,897,22_25820045_897,22_25820045_897
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr1,7132359,7134343,1984,deletion,1,intron,4,23,CAMTA1,ENST00000303635,True,1_7132359,13,1_7132359_13,1_7132359_13
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr1,117735851,117745252,9401,inversion,1,,-1,-1,,,True,1_117735851,120,1_117735851_120,1_117735851_120
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr4,35510897,22278428,-13232469,translocation,9,,-1,-1,,,True,4_35510897,3361,4_35510897_3361,4_35510897_3361
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr5,7314486,7345923,31437,deletion,5,,-1,-1,,,True,5_7314486,3364,5_7314486_3364,5_7314486_3364
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr5,179962503,180327973,365470,deletion,5,intron,8,9,RNF130,ENST00000521389,True,5_179962503,3368,5_179962503_3368,5_179962503_3368
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr6,37875654,37894864,19210,deletion,6,intron,1,6,ZFAND3,ENST00000287218,True,6_37875654,3369,6_37875654_3369,6_37875654_3369
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,103777182,129284094,25506912,tandem-duplication,8,intron,3,24,RIMS2,ENST00000504942,True,8_103777182,3373,8_103777182_3373,8_103777182_3373
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,103877370,111815532,7938162,deletion,8,intron,3,24,RIMS2,ENST00000504942,True,8_103877370,3374,8_103877370_3374,8_103877370_3374
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,105944112,108493344,2549232,deletion,8,,-1,-1,,,True,8_105944112,3375,8_105944112_3375,8_105944112_3375
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,111932004,127122627,15190623,inversion,8,,-1,-1,,,True,8_111932004,3376,8_111932004_3376,8_111932004_3376
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112133062,127705695,15572633,inversion,8,,-1,-1,,,True,8_112133062,3378,8_112133062_3378,8_112133062_3378
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112152235,127528169,15375934,inversion,8,,-1,-1,,,True,8_112152235,3377,8_112152235_3377,8_112152235_3377
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112340723,128507196,16166473,inversion,8,intron,42,71,CSMD3,ENST00000297405,True,8_112340723,3379,8_112340723_3379,8_112340723_3379
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112400196,127743960,15343764,deletion,8,intron,35,71,CSMD3,ENST00000297405,True,8_112400196,3380,8_112400196_3380,8_112400196_3380
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112446666,127851600,15404934,inversion,8,intron,32,71,CSMD3,ENST00000297405,True,8_112446666,3381,8_112446666_3381,8_112446666_3381
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112788511,125653825,12865314,inversion,8,intron,13,71,CSMD3,ENST00000297405,True,8_112788511,3382,8_112788511_3382,8_112788511_3382
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,112995163,126323005,13327842,deletion,8,intron,6,71,CSMD3,ENST00000297405,True,8_112995163,3383,8_112995163_3383,8_112995163_3383
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,113006370,115231452,2225082,deletion,8,intron,6,71,CSMD3,ENST00000297405,True,8_113006370,3384,8_113006370_3384,8_113006370_3384
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,115635694,124731365,9095671,deletion,8,5UTRintron,1,7,TRPS1,ENST00000395715,True,8_115635694,3385,8_115635694_3385,8_115635694_3385
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,126033056,128630681,2597625,tandem-duplication,8,,-1,-1,,,True,8_126033056,3386,8_126033056_3386,8_126033056_3386
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr8,128334451,128336048,1597,deletion,8,,-1,-1,,,True,8_128334451,3387,8_128334451_3387,8_128334451_3387
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr11,50052626,50104036,51410,deletion,11,,-1,-1,,,True,11_50052626,3390,11_50052626_3390,11_50052626_3390
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr11,81974631,81975902,1271,inversion,11,UTRintron,6,8,MIR4300HG,ENST00000500502,True,11_81974631,3391,11_81974631_3391,11_81974631_3391
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr12,124015426,3884015,-120131411,translocation,2,5UTRintron,2,5,RFLNA,ENST00000389727,True,12_124015426,225,12_124015426_225,12_124015426_225
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,26962786,45785633,18822847,deletion,17,,-1,-1,,,True,17_26962786,3395,17_26962786_3395,17_26962786_3395
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,27800091,46898514,19098423,inversion,17,5UTRintron,1,27,NOS2,ENST00000313735,True,17_27800091,3396,17_27800091_3396,17_27800091_3396
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,28361368,37035286,8673918,inversion,17,3UTRexon,6,6,TMEM199,ENST00000292114,True,17_28361368,3398,17_28361368_3398,17_28361368_3398
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,28367241,41679370,13312129,deletion,17,intron,2,4,AC002094.3,ENST00000555059,True,17_28367241,3397,17_28367241_3397,17_28367241_3397
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,28723266,34764300,6041034,tandem-duplication,17,intron,3,5,RPL23A,ENST00000422514,True,17_28723266,3400,17_28723266_3400,17_28723266_3400
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,28730444,28730785,341,inversion,17,intron,1,15,NEK8,ENST00000268766,True,17_28730444,3399,17_28730444_3399,17_28730444_3399
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,29197025,37592188,8395163,deletion,17,,-1,-1,,,True,17_29197025,3401,17_29197025_3401,17_29197025_3401
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,29200192,36492279,7292087,tandem-duplication,17,,-1,-1,,,True,17_29200192,3402,17_29200192_3402,17_29200192_3402
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,30302059,46906521,16604462,tandem-duplication,17,,-1,-1,,,True,17_30302059,3404,17_30302059_3404,17_30302059_3404
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,30302482,41682296,11379814,inversion,17,,-1,-1,,,True,17_30302482,3403,17_30302482_3403,17_30302482_3403
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,36448704,46871626,10422922,tandem-duplication,17,,-1,-1,,,True,17_36448704,3406,17_36448704_3406,17_36448704_3406
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,36460459,40883089,4422630,inversion,17,,-1,-1,,,True,17_36460459,3405,17_36460459_3405,17_36460459_3405
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,36488094,44791738,8303644,inversion,17,intron,2,5,ZNHIT3,ENST00000617429,True,17_36488094,3407,17_36488094_3407,17_36488094_3407
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,37035041,37035327,286,inversion,17,intron,11,12,AATF,ENST00000619387,True,17_37035041,3408,17_37035041_3408,17_37035041_3408
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,37054633,40799628,3744995,inversion,17,intron,11,12,AATF,ENST00000619387,True,17_37054633,3409,17_37054633_3409,17_37054633_3409
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,38984180,51142742,12158562,tandem-duplication,17,,-1,-1,,,True,17_38984180,3410,17_38984180_3410,17_38984180_3410
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,39000907,44792393,5791486,inversion,17,,-1,-1,,,True,17_39000907,3411,17_39000907_3411,17_39000907_3411
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,39072779,45784608,6711829,inversion,17,intron,11,14,PLXDC1,ENST00000315392,True,17_39072779,3412,17_39072779_3412,17_39072779_3412
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,40778518,45770182,4991664,inversion,17,intron,5,8,KRT27,ENST00000301656,True,17_40778518,3413,17_40778518_3413,17_40778518_3413
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr17,40882590,51139569,10256979,inversion,17,exon,2,8,KRT20,ENST00000167588,True,17_40882590,3414,17_40882590_3414,17_40882590_3414
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr18,63643660,74402825,10759165,inversion,18,5UTRintron,1,8,SERPINB4,ENST00000341074,True,18_63643660,3416,18_63643660_3416,18_63643660_3416
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chr19,24379236,24380791,1555,tandem-duplication,19,,-1,-1,,,True,19_24379236,3417,19_24379236_3417,19_24379236_3417
t6_PDAC_case11_S7,PDAC_case11_S7,case11_S7_PDAC,case11,case11_S7,PDAC,t6,chrX,58460640,58462953,2313,deletion,X,,-1,-1,,,True,X_58460640,3420,X_58460640_3420,X_58460640_3420
t6_PDAC_case11_S8,PDAC_case11_S8,case11_S8_PDAC,case11,case11_S8,PDAC,t6,chr8,57203766,57210491,6725,tandem-duplication,8,UTRintron,3,4,LINC01606,ENST00000519241,True,8_57203766,1207,8_57203766_1207,8_57203766_1207
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr1,1288721,1289871,1150,deletion,chr1,intron,12,18,SCNN1D,ENST00000379116,True,1_1288721,15,1_1288721_15,1_1288721_15
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr1,64492394,24696688,-39795706,translocation,chr13,intron,1,27,CACHD1,ENST00000290039,True,1_64492394,417,1_64492394_417,1_64492394_417
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr2,136668571,39296605,-97371966,translocation,chr14,,-1,-1,,,True,2_136668571,17747,2_136668571_17747,2_136668571_17747
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr2,157423466,96010563,-61412903,translocation,chr15,intron,6,8,CYTIP,ENST00000264192,True,2_157423466,17748,2_157423466_17748,2_157423466_17748
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr2,174716682,66057592,-108659090,translocation,chr12,,-1,-1,,,True,2_174716682,17751,2_174716682_17751,2_174716682_17751
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr4,1545315,1547181,1866,deletion,chr4,,-1,-1,,,True,4_1545315,17770,4_1545315_17770,4_1545315_17770
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr4,1707292,99858689,98151397,translocation,chr11,intron,2,8,SLBP,ENST00000489418,True,4_1707292,17771,4_1707292_17771,4_1707292_17771
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr4,75580699,117704913,42124214,translocation,chrX,3UTRintron,11,12,CDKL2,ENST00000429927,True,4_75580699,17786,4_75580699_17786,4_75580699_17786
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr5,87019474,58149326,-28870148,translocation,chr12,UTRintron,1,3,AC109492.1,ENST00000503349,True,5_87019474,17799,5_87019474_17799,5_87019474_17799
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr5,95061408,120522640,25461232,translocation,chr9,intron,1,23,MCTP1,ENST00000515393,True,5_95061408,17800,5_95061408_17800,5_95061408_17800
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr8,4486142,26775958,22289816,translocation,chr12,intron,2,70,CSMD1,ENST00000635120,True,8_4486142,17849,8_4486142_17849,8_4486142_17849
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr8,50570226,97122895,46552669,inversion,chr8,intron,12,19,SNTG1,ENST00000522124,True,8_50570226,17852,8_50570226_17852,8_50570226_17852
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr9,1277777,15237539,13959762,translocation,chrY,,-1,-1,,,True,9_1277777,17861,9_1277777_17861,9_1277777_17861
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr9,61459343,94137866,32678523,translocation,chr11,,-1,-1,,,True,9_61459343,17864,9_61459343_17864,9_61459343_17864
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr9,120522640,66057592,-54465048,translocation,chr12,intron,11,38,CDK5RAP2,ENST00000349780,True,9_120522640,17870,9_120522640_17870,9_120522640_17870
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr11,308048,321121,13073,inversion,chr11,5UTRexon,1,2,IFITM2,ENST00000616316,True,11_308048,17889,11_308048_17889,11_308048_17889
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr11,108113334,60341466,-47771868,translocation,chr16,,-1,-1,,,True,11_108113334,17895,11_108113334_17895,11_108113334_17895
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr13,58719864,58736027,16163,deletion,chr13,,-1,-1,,,True,13_58719864,17913,13_58719864_17913,13_58719864_17913
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr14,73547023,84131608,10584585,translocation,chr16,5UTRintron,1,18,HEATR4,ENST00000553558,True,14_73547023,17921,14_73547023_17921,14_73547023_17921
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr15,61073390,64527944,3454554,translocation,chr18,intron,1,11,RORA,ENST00000335670,True,15_61073390,17934,15_61073390_17934,15_61073390_17934
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr15,83501300,85849271,2347971,tandem-duplication,chr15,intron,1,9,SH3GL3,ENST00000427482,True,15_83501300,17935,15_83501300_17935,15_83501300_17935
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr16,3762607,5529402,1766795,tandem-duplication,chr16,intron,16,31,CREBBP,ENST00000262367,True,16_3762607,17940,16_3762607_17940,16_3762607_17940
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr16,20405324,20414554,9227,inversion,chr16,,-1,-1,,,True,16_20405324,17945,16_20405324_17945,16_20405324_17945
t2_IPMN_LGD_case12_S2,IPMN_LGD_case12_S2,case12_S2_IPMN_LGD,case12,case12_S2,IPMN_LGD,t2,chr20,31071233,31073485,2252,tandem-duplication,chr20,,-1,-1,,,True,20_31071233,17996,20_31071233_17996,20_31071233_17996
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,2121512,2124374,2862,deletion,chr1,5UTRintron,1,15,PRKCZ,ENST00000400921,True,1_2121512,33,1_2121512_33,1_2121512_33
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,43593641,43594283,642,inversion,chr1,intron,11,34,PTPRF,ENST00000359947,True,1_43593641,341,1_43593641_341,1_43593641_341
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,46337173,180941895,134604722,translocation,chr5,,-1,-1,,,True,1_46337173,365,1_46337173_365,1_46337173_365
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,57207504,2570089,-54637415,translocation,chr4,intron,2,15,DAB1,ENST00000371236,True,1_57207504,436,1_57207504_436,1_57207504_436
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,64492394,24696688,-39795706,translocation,chr13,intron,1,27,CACHD1,ENST00000290039,True,1_64492394,486,1_64492394_486,1_64492394_486
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,200926227,42795611,-158130616,translocation,chr11,,-1,-1,,,True,1_200926227,1210,1_200926227_1210,1_200926227_1210
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,204133641,236849235,32715594,translocation,chr2,3UTRintron,7,8,ETNK2,ENST00000367201,True,1_204133641,1243,1_204133641_1243,1_204133641_1243
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr1,211608981,160535696,-51073285,translocation,chr2,,-1,-1,,,True,1_211608981,1295,1_211608981_1295,1_211608981_1295
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr2,87418332,87425077,6745,tandem-duplication,chr2,,-1,-1,,,True,2_87418332,19518,2_87418332_19518,2_87418332_19518
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr2,136668571,39296605,-97371966,translocation,chr14,,-1,-1,,,True,2_136668571,19530,2_136668571_19530,2_136668571_19530
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr2,170001912,66057590,-103944322,translocation,chr12,intron,27,39,UBR3,ENST00000418381,True,2_170001912,19533,2_170001912_19533,2_170001912_19533
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr2,174716675,66057592,-108659083,translocation,chr12,,-1,-1,,,True,2_174716675,19534,2_174716675_19534,2_174716675_19534
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr2,203227894,66057592,-137170302,translocation,chr12,,-1,-1,,,True,2_203227894,19537,2_203227894_19537,2_203227894_19537
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr4,1545694,1546932,1238,deletion,chr4,,-1,-1,,,True,4_1545694,19577,4_1545694_19577,4_1545694_19577
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr4,11055108,151316680,140261572,translocation,chr7,,-1,-1,,,True,4_11055108,19583,4_11055108_19583,4_11055108_19583
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr4,80550966,117108205,36557239,translocation,chr6,intron,2,7,C4orf22,ENST00000508675,True,4_80550966,19609,4_80550966_19609,4_80550966_19609
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr4,168709449,64377640,-104331809,translocation,chr17,intron,9,21,PALLD,ENST00000261509,True,4_168709449,19617,4_168709449_19617,4_168709449_19617
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr5,87019474,58149326,-28870148,translocation,chr12,UTRintron,1,3,AC109492.1,ENST00000503349,True,5_87019474,19625,5_87019474_19625,5_87019474_19625
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr5,95061408,120522640,25461232,translocation,chr9,intron,1,23,MCTP1,ENST00000515393,True,5_95061408,19627,5_95061408_19627,5_95061408_19627
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr6,115072756,84657039,-30415717,translocation,chr7,,-1,-1,,,True,6_115072756,19656,6_115072756_19656,6_115072756_19656
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr8,4486141,26775958,22289817,translocation,chr12,intron,2,70,CSMD1,ENST00000635120,True,8_4486141,19701,8_4486141_19701,8_4486141_19701
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr8,50570267,97122895,46552628,inversion,chr8,intron,12,19,SNTG1,ENST00000522124,True,8_50570267,19707,8_50570267_19707,8_50570267_19707
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr9,1277777,15237545,13959768,translocation,chrY,,-1,-1,,,True,9_1277777,19719,9_1277777_19719,9_1277777_19719
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr9,120522640,77618528,-42904112,translocation,chr15,intron,11,38,CDK5RAP2,ENST00000349780,True,9_120522640,19728,9_120522640_19728,9_120522640_19728
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr9,135250706,41018501,-94232205,translocation,chrX,UTRintron,1,2,AL390778.2,ENST00000420883,True,9_135250706,19734,9_135250706_19734,9_135250706_19734
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr10,42166992,42167569,577,deletion,chr10,,-1,-1,,,True,10_42166992,19745,10_42166992_19745,10_42166992_19745
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr10,65671224,33516136,-32155088,translocation,chr11,UTRintron,6,7,LINC01515,ENST00000433152,True,10_65671224,19748,10_65671224_19748,10_65671224_19748
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr11,108113334,60341466,-47771868,translocation,chr16,,-1,-1,,,True,11_108113334,19784,11_108113334_19784,11_108113334_19784
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr12,53620614,40422778,-13197836,translocation,chr15,5UTRintron,1,12,ATF7,ENST00000420353,True,12_53620614,19795,12_53620614_19795,12_53620614_19795
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr12,84160334,18948765,-65211569,translocation,chr16,,-1,-1,,,True,12_84160334,19796,12_84160334_19796,12_84160334_19796
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr13,113346285,113347072,787,deletion,chr13,intron,4,6,GRTP1,ENST00000620217,True,13_113346285,19811,13_113346285_19811,13_113346285_19811
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr15,61073390,64527984,3454594,translocation,chr18,intron,1,11,RORA,ENST00000335670,True,15_61073390,19835,15_61073390_19835,15_61073390_19835
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr15,83501300,85849235,2347935,tandem-duplication,chr15,intron,1,9,SH3GL3,ENST00000427482,True,15_83501300,19841,15_83501300_19841,15_83501300_19841
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr16,2599585,2677940,78355,tandem-duplication,chr16,3UTRexon,14,14,PDPK1,ENST00000342085,True,16_2599585,19852,16_2599585_19852,16_2599585_19852
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr19,13221222,59480203,46258981,translocation,chr20,intron,39,48,CACNA1A,ENST00000638029,True,19_13221222,19925,19_13221222_19925,19_13221222_19925
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr19,22866608,22961430,94822,deletion,chr19,,-1,-1,,,True,19_22866608,19928,19_22866608_19928,19_22866608_19928
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr20,31071233,31073485,2252,tandem-duplication,chr20,,-1,-1,,,True,20_31071233,19947,20_31071233_19947,20_31071233_19947
t2_IPMN_LGD_case12_S3,IPMN_LGD_case12_S3,case12_S3_IPMN_LGD,case12,case12_S3,IPMN_LGD,t2,chr22,20359361,20360291,930,deletion,chr22,,-1,-1,,,True,22_20359361,19965,22_20359361_19965,22_20359361_19965
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr1,64492394,24696688,-39795706,translocation,chr13,intron,1,27,CACHD1,ENST00000290039,True,1_64492394,520,1_64492394_520,1_64492394_520
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr2,90384665,90392285,7620,deletion,chr2,,-1,-1,,,True,2_90384665,22255,2_90384665_22255,2_90384665_22255
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr2,174716594,66057592,-108659002,translocation,chr12,,-1,-1,,,True,2_174716594,22259,2_174716594_22259,2_174716594_22259
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr4,1545331,1547100,1769,deletion,chr4,,-1,-1,,,True,4_1545331,22271,4_1545331_22271,4_1545331_22271
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr7,157731655,157733579,1924,deletion,chr7,intron,11,22,PTPRN2,ENST00000389413,True,7_157731655,22306,7_157731655_22306,7_157731655_22306
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr9,1277777,15237545,13959768,translocation,chrY,,-1,-1,,,True,9_1277777,22318,9_1277777_22318,9_1277777_22318
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr13,58719864,58736027,16163,deletion,chr13,,-1,-1,,,True,13_58719864,22337,13_58719864_22337,13_58719864_22337
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr14,73546924,84131614,10584690,translocation,chr16,5UTRintron,1,18,HEATR4,ENST00000553558,True,14_73546924,22343,14_73546924_22343,14_73546924_22343
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr15,83501300,85849271,2347971,tandem-duplication,chr15,intron,1,9,SH3GL3,ENST00000427482,True,15_83501300,22349,15_83501300_22349,15_83501300_22349
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr15,99104571,133486247,34381676,translocation,chrX,5UTRintron,1,5,SYNM,ENST00000560674,True,15_99104571,22351,15_99104571_22351,15_99104571_22351
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr16,20405324,20414554,9227,inversion,chr16,,-1,-1,,,True,16_20405324,22356,16_20405324_22356,16_20405324_22356
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr16,33337692,33339248,1556,deletion,chr16,,-1,-1,,,True,16_33337692,22357,16_33337692_22357,16_33337692_22357
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr17,21884549,21987759,103210,deletion,chr17,,-1,-1,,,True,17_21884549,22363,17_21884549_22363,17_21884549_22363
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr18,62580724,62581769,1045,deletion,chr18,,-1,-1,,,True,18_62580724,22368,18_62580724_22368,18_62580724_22368
t2_IPMN_LGD_case12_S5,IPMN_LGD_case12_S5,case12_S5_IPMN_LGD,case12,case12_S5,IPMN_LGD,t2,chr22,50433219,50433908,689,deletion,chr22,intron,12,24,PPP6R2,ENST00000612753,True,22_50433219,22387,22_50433219_22387,22_50433219_22387
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr1,64492394,24696681,-39795713,translocation,chr13,intron,1,27,CACHD1,ENST00000290039,True,1_64492394,434,1_64492394_434,1_64492394_434
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr1,146428576,55379104,-91049472,translocation,chr15,,-1,-1,,,True,1_146428576,772,1_146428576_772,1_146428576_772
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr2,88860913,88886132,25219,inversion,chr2,,-1,-1,,,True,2_88860913,18434,2_88860913_18434,2_88860913_18434
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr2,136668571,39296605,-97371966,translocation,chr14,,-1,-1,,,True,2_136668571,18440,2_136668571_18440,2_136668571_18440
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr2,157423466,96010578,-61412888,translocation,chr15,intron,6,8,CYTIP,ENST00000264192,True,2_157423466,18441,2_157423466_18441,2_157423466_18441
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr4,49114671,49116608,1937,deletion,chr4,,-1,-1,,,True,4_49114671,18454,4_49114671_18454,4_49114671_18454
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr8,120918365,17094773,-103823592,translocation,chr22,UTRintron,1,4,AC068413.1,ENST00000517739,True,8_120918365,18491,8_120918365_18491,8_120918365_18491
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr9,1277730,15237539,13959809,translocation,chrY,,-1,-1,,,True,9_1277730,18493,9_1277730_18493,9_1277730_18493
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr9,120522640,66057592,-54465048,translocation,chr12,intron,11,38,CDK5RAP2,ENST00000349780,True,9_120522640,18496,9_120522640_18496,9_120522640_18496
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr12,53620678,40422611,-13198067,translocation,chr15,5UTRintron,1,12,ATF7,ENST00000420353,True,12_53620678,18508,12_53620678_18508,12_53620678_18508
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr13,113346327,113346945,618,deletion,chr13,intron,4,6,GRTP1,ENST00000620217,True,13_113346327,18512,13_113346327_18512,13_113346327_18512
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr15,20341898,20343572,1674,deletion,chr15,,-1,-1,,,True,15_20341898,18515,15_20341898_18515,15_20341898_18515
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr17,66799538,6995475,-59804063,translocation,chr19,intron,16,17,PRKCA,ENST00000413366,True,17_66799538,18535,17_66799538_18535,17_66799538_18535
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr22,46616202,46616613,411,deletion,chr22,5UTRintron,1,3,GRAMD4,ENST00000447351,True,22_46616202,18553,22_46616202_18553,22_46616202_18553
t2_IPMN_LGD_case12_S1,IPMN_LGD_case12_S1,case12_S1_IPMN_LGD,case12,case12_S1,IPMN_LGD,t2,chr22,50433441,50433938,497,deletion,chr22,intron,12,24,PPP6R2,ENST00000612753,True,22_50433441,18555,22_50433441_18555,22_50433441_18555
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr2,145026930,145801354,774424,deletion,2,UTRintron,5,6,TEX41,ENST00000598659,True,2_145026930,928,2_145026930_928,2_145026930_928
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr2,146224082,146540450,316368,deletion,2,,-1,-1,,,True,2_146224082,929,2_146224082_929,2_146224082_929
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr2,184094901,186715147,2620246,deletion,2,,-1,-1,,,True,2_184094901,931,2_184094901_931,2_184094901_931
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr2,223339081,223638527,299446,deletion,2,,-1,-1,,,True,2_223339081,932,2_223339081_932,2_223339081_932
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr2,232821686,232823879,2193,inversion,2,intron,23,31,GIGYF2,ENST00000409547,True,2_232821686,934,2_232821686_934,2_232821686_934
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr3,48213527,91066614,42853087,translocation,8,,-1,-1,,,True,3_48213527,935,3_48213527_935,3_48213527_935
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr3,61926676,107770157,45843481,translocation,7,intron,2,30,PTPRG,ENST00000474889,True,3_61926676,936,3_61926676_936,3_61926676_936
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr5,41428445,110620391,69191946,translocation,8,intron,1,3,PLCXD3,ENST00000377801,True,5_41428445,962,5_41428445_962,5_41428445_962
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr6,2191367,2194771,3404,deletion,6,intron,1,11,GMDS,ENST00000380815,True,6_2191367,967,6_2191367_967,6_2191367_967
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr7,111384368,111550342,165974,deletion,7,intron,4,7,IMMP2L,ENST00000331762,True,7_111384368,977,7_111384368_977,7_111384368_977
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr11,33648576,183234786,149586210,translocation,3,intron,16,20,KIAA1549L,ENST00000321505,True,11_33648576,947,11_33648576_947,11_33648576_947
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr12,42626362,42633655,7293,deletion,12,UTRintron,5,6,LINC02402,ENST00000550337,True,12_42626362,1000,12_42626362_1000,12_42626362_1000
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr12,67314243,67401372,87129,deletion,12,3UTRexon,15,15,CAND1,ENST00000545606,True,12_67314243,1002,12_67314243_1002,12_67314243_1002
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,49233800,55340755,6106955,inversion,14,,-1,-1,,,True,14_49233800,1010,14_49233800_1010,14_49233800_1010
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,57392688,61784428,4391740,inversion,14,intron,2,5,NAA30,ENST00000556492,True,14_57392688,1012,14_57392688_1012,14_57392688_1012
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,58191263,83838261,25646998,inversion,14,,-1,-1,,,True,14_58191263,1013,14_58191263_1013,14_58191263_1013
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,61091479,61093637,2158,inversion,14,,-1,-1,,,True,14_61091479,1014,14_61091479_1014,14_61091479_1014
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,61783916,84647141,22863225,tandem-duplication,14,intron,8,10,SNAPC1,ENST00000216294,True,14_61783916,1015,14_61783916_1015,14_61783916_1015
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63388760,86677031,23288271,tandem-duplication,14,intron,11,14,PPP2R5E,ENST00000337537,True,14_63388760,1016,14_63388760_1016,14_63388760_1016
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63401065,75482146,12081081,inversion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401065,1019,14_63401065_1019,14_63401065_1019
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63401559,63451129,49570,inversion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401559,1017,14_63401559_1017,14_63401559_1017
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63401561,75488787,12087226,deletion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401561,1018,14_63401561_1018,14_63401561_1018
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63449856,75489647,12039791,inversion,14,intron,3,14,PPP2R5E,ENST00000337537,True,14_63449856,1020,14_63449856_1020,14_63449856_1020
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63625563,75489271,11863708,inversion,14,5UTRintron,1,2,WDR89,ENST00000394942,True,14_63625563,1022,14_63625563_1022,14_63625563_1022
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,63625831,75489046,11863215,inversion,14,5UTRintron,1,2,WDR89,ENST00000394942,True,14_63625831,1021,14_63625831_1021,14_63625831_1021
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,67228170,67229205,1035,inversion,14,3UTRintron,8,9,FAM71D,ENST00000612183,True,14_67228170,1023,14_67228170_1023,14_67228170_1023
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,67235060,75495941,8260881,inversion,14,,-1,-1,,,True,14_67235060,1024,14_67235060_1024,14_67235060_1024
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr14,93419981,95436321,2016340,deletion,14,5UTRintron,1,50,UNC79,ENST00000256339,True,14_93419981,1025,14_93419981_1025,14_93419981_1025
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr18,36437596,66622423,30184827,inversion,18,intron,3,29,FHOD3,ENST00000590592,True,18_36437596,1045,18_36437596_1045,18_36437596_1045
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr18,57442665,57443397,732,inversion,18,intron,1,2,ONECUT2,ENST00000491143,True,18_57442665,1046,18_57442665_1046,18_57442665_1046
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chr19,53391193,32500900,-20890293,translocation,6,intron,3,4,ZNF525,ENST00000593918,True,19_53391193,969,19_53391193_969,19_53391193_969
t6_PDAC_case13_S3,PDAC_case13_S3,case13_S3_PDAC,case13,case13_S3,PDAC,t6,chrX,2631657,2632403,746,inversion,X,,-1,-1,,,True,X_2631657,1062,X_2631657_1062,X_2631657_1062
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr1,93745499,220481412,126735913,translocation,2,5UTRintron,2,14,BCAR3,ENST00000370244,True,1_93745499,54,1_93745499_54,1_93745499_54
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr1,168119274,182626730,14507456,translocation,2,5UTRintron,2,8,GPR161,ENST00000367838,True,1_168119274,90,1_168119274_90,1_168119274_90
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr2,241789863,92034950,-149754913,translocation,4,intron,1,4,GAL3ST2,ENST00000192314,True,2_241789863,1652,2_241789863_1652,2_241789863_1652
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr4,3591660,57716205,54124545,translocation,X,,-1,-1,,,True,4_3591660,1666,4_3591660_1666,4_3591660_1666
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr4,28663659,74398398,45734739,translocation,X,,-1,-1,,,True,4_28663659,1667,4_28663659_1667,4_28663659_1667
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr5,152515383,57409325,-95106058,translocation,8,,-1,-1,,,True,5_152515383,1691,5_152515383_1691,5_152515383_1691
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr7,100955226,100958351,3125,tandem-duplication,7,exon,2,12,MUC3A,ENST00000379458,True,7_100955226,1710,7_100955226_1710,7_100955226_1710
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr7,155259008,123670224,-31588784,translocation,8,,-1,-1,,,True,7_155259008,1714,7_155259008_1714,7_155259008_1714
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr11,103002058,77618532,-25383526,translocation,15,,-1,-1,,,True,11_103002058,1729,11_103002058_1729,11_103002058_1729
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr11,108113376,115474317,7360941,tandem-duplication,11,,-1,-1,,,True,11_108113376,1730,11_108113376_1730,11_108113376_1730
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr16,33336697,33338658,1961,deletion,16,,-1,-1,,,True,16_33336697,1752,16_33336697_1752,16_33336697_1752
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr17,70276349,120408921,50132572,translocation,6,,-1,-1,,,True,17_70276349,1704,17_70276349_1704,17_70276349_1704
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chr19,29465200,122033635,92568435,translocation,X,UTRintron,1,10,AC011474.1,ENST00000582581,True,19_29465200,1768,19_29465200_1768,19_29465200_1768
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chrX,268600,270596,1996,deletion,X,,-1,-1,,,True,X_268600,1791,X_268600_1791,X_268600_1791
t1_pancreatistis_case13_S4,pancreatistis_case13_S4,case13_S4_pancreatistis,case13,case13_S4,pancreatistis,t1,chrX,2631755,2632009,254,inversion,X,,-1,-1,,,True,X_2631755,1794,X_2631755_1794,X_2631755_1794
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr1,19881887,244804955,224923068,tandem-duplication,1,,-1,-1,,,True,1_19881887,27,1_19881887_27,1_19881887_27
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr1,225964504,172893939,-53070565,translocation,5,,-1,-1,,,True,1_225964504,148,1_225964504_148,1_225964504_148
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr1,228405919,240944132,12538213,inversion,1,intron,1,6,TRIM11,ENST00000284551,True,1_228405919,150,1_228405919_150,1_228405919_150
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr1,240943243,240944446,1203,inversion,1,intron,4,18,RGS7,ENST00000366565,True,1_240943243,161,1_240943243_161,1_240943243_161
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,4324226,230422869,226098643,inversion,2,,-1,-1,,,True,2_4324226,174,2_4324226_174,2_4324226_174
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,27308911,209311950,182003039,tandem-duplication,2,,-1,-1,,,True,2_27308911,186,2_27308911_186,2_27308911_186
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,28138021,43667177,15529156,deletion,2,intron,7,13,BABAM2,ENST00000344773,True,2_28138021,187,2_28138021_187,2_28138021_187
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,90389460,90393693,4233,tandem-duplication,2,,-1,-1,,,True,2_90389460,1833,2_90389460_1833,2_90389460_1833
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,145026930,145801354,774424,deletion,2,UTRintron,5,6,TEX41,ENST00000598659,True,2_145026930,1841,2_145026930_1841,2_145026930_1841
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,146224082,146540450,316368,deletion,2,,-1,-1,,,True,2_146224082,1842,2_146224082_1842,2_146224082_1842
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,167234111,195094452,27860341,deletion,2,intron,5,11,XIRP2,ENST00000409195,True,2_167234111,1843,2_167234111_1843,2_167234111_1843
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,184094901,186715147,2620246,deletion,2,,-1,-1,,,True,2_184094901,1845,2_184094901_1845,2_184094901_1845
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,198530249,207479894,8949645,deletion,2,UTRintron,2,4,AC019330.1,ENST00000637390,True,2_198530249,1846,2_198530249_1846,2_198530249_1846
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,208175310,208628670,453360,deletion,2,intron,6,9,C2orf80,ENST00000341287,True,2_208175310,1847,2_208175310_1847,2_208175310_1847
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,210350471,210800338,449867,inversion,2,,-1,-1,,,True,2_210350471,1848,2_210350471_1848,2_210350471_1848
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,223339081,223638527,299446,deletion,2,,-1,-1,,,True,2_223339081,1849,2_223339081_1849,2_223339081_1849
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,230616425,231219271,602846,deletion,2,,-1,-1,,,True,2_230616425,1851,2_230616425_1851,2_230616425_1851
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr2,232821686,232823879,2193,inversion,2,intron,23,31,GIGYF2,ENST00000409547,True,2_232821686,1853,2_232821686_1853,2_232821686_1853
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr3,35668030,140362297,104694267,translocation,4,5UTRintron,1,6,ARPP21,ENST00000428373,True,3_35668030,1857,3_35668030_1857,3_35668030_1857
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr3,75241337,190106957,114865620,translocation,4,,-1,-1,,,True,3_75241337,1858,3_75241337_1858,3_75241337_1858
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr4,711622,78833748,78122126,translocation,9,5UTRintron,1,11,PCGF3,ENST00000362003,True,4_711622,1884,4_711622_1884,4_711622_1884
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr4,140369284,140370658,1374,deletion,4,intron,1,4,SCOC,ENST00000394203,True,4_140369284,1907,4_140369284_1907,4_140369284_1907
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr5,31849974,107476056,75626082,inversion,5,intron,2,25,PDZD2,ENST00000438447,True,5_31849974,1914,5_31849974_1914,5_31849974_1914
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr5,103261540,100976099,-2285441,translocation,8,5UTRintron,1,3,C5orf30,ENST00000319933,True,5_103261540,1917,5_103261540_1917,5_103261540_1917
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr6,2191367,2194199,2832,deletion,6,intron,1,11,GMDS,ENST00000380815,True,6_2191367,1922,6_2191367_1922,6_2191367_1922
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr7,111384402,111550408,166006,deletion,7,intron,4,7,IMMP2L,ENST00000331762,True,7_111384402,1945,7_111384402_1945,7_111384402_1945
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr7,155346821,155348170,1349,deletion,7,,-1,-1,,,True,7_155346821,1958,7_155346821_1958,7_155346821_1958
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr8,100254255,100256749,2494,inversion,8,,-1,-1,,,True,8_100254255,1960,8_100254255_1960,8_100254255_1960
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr10,17575583,92538891,74963308,translocation,13,,-1,-1,,,True,10_17575583,1968,10_17575583_1968,10_17575583_1968
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr10,73007760,34346437,-38661323,translocation,17,3UTRexon,15,15,P4HA1,ENST00000263556,True,10_73007760,1970,10_73007760_1970,10_73007760_1970
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr11,56697735,56708337,10602,tandem-duplication,11,,-1,-1,,,True,11_56697735,1980,11_56697735_1980,11_56697735_1980
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,15424105,74087075,58662970,inversion,12,intron,1,27,PTPRO,ENST00000281171,True,12_15424105,1984,12_15424105_1984,12_15424105_1984
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,15506547,15520634,14087,inversion,12,intron,6,27,PTPRO,ENST00000281171,True,12_15506547,1985,12_15506547_1985,12_15506547_1985
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,40486544,40488453,1909,deletion,12,,-1,-1,,,True,12_40486544,1988,12_40486544_1988,12_40486544_1988
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,67314247,67401370,87123,deletion,12,3UTRexon,15,15,CAND1,ENST00000545606,True,12_67314247,1992,12_67314247_1992,12_67314247_1992
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,68550545,68552608,2063,inversion,12,,-1,-1,,,True,12_68550545,1993,12_68550545_1993,12_68550545_1993
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,72512162,72513829,1667,inversion,12,intron,6,19,TRHDE,ENST00000261180,True,12_72512162,1994,12_72512162_1994,12_72512162_1994
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,73798574,73799879,1305,inversion,12,UTRintron,4,5,LINC02445,ENST00000551387,True,12_73798574,1995,12_73798574_1995,12_73798574_1995
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr12,74162714,74164006,1292,inversion,12,UTRintron,4,7,AC090502.1,ENST00000549905,True,12_74162714,1996,12_74162714_1996,12_74162714_1996
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr13,31078253,103131757,72053504,translocation,2,,-1,-1,,,True,13_31078253,1839,13_31078253_1839,13_31078253_1839
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,30448605,86918452,56469847,inversion,14,,-1,-1,,,True,14_30448605,2003,14_30448605_2003,14_30448605_2003
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,49233800,55340755,6106955,inversion,14,,-1,-1,,,True,14_49233800,2004,14_49233800_2004,14_49233800_2004
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,51478064,51478647,583,inversion,14,UTRintron,2,3,FRMD6-AS2,ENST00000556617,True,14_51478064,2005,14_51478064_2005,14_51478064_2005
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,52710509,86469315,33758806,deletion,14,intron,4,14,PSMC6,ENST00000445930,True,14_52710509,2006,14_52710509_2006,14_52710509_2006
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,57392688,61784428,4391740,inversion,14,intron,2,5,NAA30,ENST00000556492,True,14_57392688,2008,14_57392688_2008,14_57392688_2008
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,58191263,83838259,25646996,inversion,14,,-1,-1,,,True,14_58191263,2009,14_58191263_2009,14_58191263_2009
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,60660555,60662101,1546,inversion,14,,-1,-1,,,True,14_60660555,2010,14_60660555_2010,14_60660555_2010
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,61091479,61093637,2158,inversion,14,,-1,-1,,,True,14_61091479,2011,14_61091479_2011,14_61091479_2011
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,61783916,84647141,22863225,tandem-duplication,14,intron,8,10,SNAPC1,ENST00000216294,True,14_61783916,2012,14_61783916_2012,14_61783916_2012
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63388760,86677031,23288271,tandem-duplication,14,intron,11,14,PPP2R5E,ENST00000337537,True,14_63388760,2013,14_63388760_2013,14_63388760_2013
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63401065,75482146,12081081,inversion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401065,2017,14_63401065_2017,14_63401065_2017
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63401561,75488787,12087226,deletion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401561,2015,14_63401561_2015,14_63401561_2015
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63401561,63625832,224271,inversion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401561,2016,14_63401561_2016,14_63401561_2016
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63401565,63451129,49564,inversion,14,intron,5,14,PPP2R5E,ENST00000337537,True,14_63401565,2014,14_63401565_2014,14_63401565_2014
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63449856,75489647,12039791,inversion,14,intron,3,14,PPP2R5E,ENST00000337537,True,14_63449856,2018,14_63449856_2018,14_63449856_2018
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63449856,63625563,175707,deletion,14,intron,3,14,PPP2R5E,ENST00000337537,True,14_63449856,2019,14_63449856_2019,14_63449856_2019
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63451050,63625831,174781,tandem-duplication,14,intron,3,14,PPP2R5E,ENST00000337537,True,14_63451050,2020,14_63451050_2020,14_63451050_2020
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63451050,75488787,12037737,inversion,14,intron,3,14,PPP2R5E,ENST00000337537,True,14_63451050,2021,14_63451050_2021,14_63451050_2021
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63625563,75489271,11863708,inversion,14,5UTRintron,1,2,WDR89,ENST00000394942,True,14_63625563,2023,14_63625563_2023,14_63625563_2023
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,63625826,75489046,11863220,inversion,14,5UTRintron,1,2,WDR89,ENST00000394942,True,14_63625826,2022,14_63625826_2022,14_63625826_2022
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,67228055,67229205,1150,inversion,14,3UTRintron,8,9,FAM71D,ENST00000612183,True,14_67228055,2024,14_67228055_2024,14_67228055_2024
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,67235060,75495941,8260881,inversion,14,,-1,-1,,,True,14_67235060,2025,14_67235060_2025,14_67235060_2025
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr14,93419981,95436321,2016340,deletion,14,5UTRintron,1,50,UNC79,ENST00000256339,True,14_93419981,2026,14_93419981_2026,14_93419981_2026
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr16,25612466,158429348,132816882,translocation,5,,-1,-1,,,True,16_25612466,1921,16_25612466_1921,16_25612466_1921
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr16,36126973,36127624,651,inversion,16,,-1,-1,,,True,16_36126973,2043,16_36126973_2043,16_36126973_2043
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr18,57442665,57443360,695,inversion,18,intron,1,2,ONECUT2,ENST00000491143,True,18_57442665,2055,18_57442665_2055,18_57442665_2055
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr18,58225349,62570249,4344900,deletion,18,5UTRintron,2,31,NEDD4L,ENST00000456986,True,18_58225349,2056,18_58225349_2056,18_58225349_2056
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr18,65652898,115733412,50080514,translocation,7,,-1,-1,,,True,18_65652898,1946,18_65652898_1946,18_65652898_1946
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr18,79919998,79921526,1528,deletion,18,intron,4,6,PQLC1,ENST00000397778,True,18_79919998,2057,18_79919998_2057,18_79919998_2057
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr19,50017527,231578952,181561425,translocation,2,5UTRintron,2,15,VRK3,ENST00000599538,True,19_50017527,1852,19_50017527_1852,19_50017527_1852
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr22,28669358,28669733,375,inversion,22,intron,1,23,TTC28,ENST00000397906,True,22_28669358,2073,22_28669358_2073,22_28669358_2073
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chr22,28670118,25901400,-2768718,translocation,3,intron,1,23,TTC28,ENST00000397906,True,22_28670118,1856,22_28670118_1856,22_28670118_1856
t6_PDAC_case13_S5,PDAC_case13_S5,case13_S5_PDAC,case13,case13_S5,PDAC,t6,chrX,2631657,2632654,997,inversion,X,,-1,-1,,,True,X_2631657,2076,X_2631657_2076,X_2631657_2076
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,93181316,66057591,-27123725,translocation,12,5UTRintron,1,29,CCDC18,ENST00000343253,True,1_93181316,80,1_93181316_80,1_93181316_80
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,118366307,118815362,449055,tandem-duplication,1,,-1,-1,,,True,1_118366307,91,1_118366307_91,1_118366307_91
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,118807899,38695893,-80112006,translocation,8,,-1,-1,,,True,1_118807899,93,1_118807899_93,1_118807899_93
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,119173137,234269423,115096286,deletion,1,,-1,-1,,,True,1_119173137,95,1_119173137_95,1_119173137_95
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,154059607,154065919,6312,inversion,1,intron,20,40,NUP210L,ENST00000368559,True,1_154059607,110,1_154059607_110,1_154059607_110
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,154071604,154565263,493659,inversion,1,intron,16,40,NUP210L,ENST00000368559,True,1_154071604,111,1_154071604_111,1_154071604_111
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,157395964,174815327,17419363,deletion,1,,-1,-1,,,True,1_157395964,115,1_157395964_115,1_157395964_115
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,160318513,235933227,75614714,tandem-duplication,1,intron,8,33,COPA,ENST00000368069,True,1_160318513,121,1_160318513_121,1_160318513_121
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,167689033,221146776,53457743,inversion,1,intron,3,7,RCSD1,ENST00000367854,True,1_167689033,130,1_167689033_130,1_167689033_130
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,172339976,219621799,47281823,deletion,1,intron,17,21,DNM3,ENST00000627582,True,1_172339976,135,1_172339976_135,1_172339976_135
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,174113801,187087225,12973424,tandem-duplication,1,,-1,-1,,,True,1_174113801,136,1_174113801_136,1_174113801_136
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,175851376,209660937,33809561,inversion,1,,-1,-1,,,True,1_175851376,139,1_175851376_139,1_175851376_139
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,176837686,199525070,22687384,tandem-duplication,1,intron,21,23,PAPPA2,ENST00000367662,True,1_176837686,141,1_176837686_141,1_176837686_141
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,185583521,215810961,30227440,deletion,1,UTRintron,2,4,LINC01350,ENST00000608417,True,1_185583521,148,1_185583521_148,1_185583521_148
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,199210701,208921095,9710394,tandem-duplication,1,UTRintron,3,4,AC099673.1,ENST00000452199,True,1_199210701,161,1_199210701_161,1_199210701_161
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,219285811,220394579,1108768,inversion,1,,-1,-1,,,True,1_219285811,177,1_219285811_177,1_219285811_177
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,222118005,231686520,9568515,inversion,1,UTRintron,3,4,AL356108.1,ENST00000416510,True,1_222118005,180,1_222118005_180,1_222118005_180
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,224013872,224015074,1202,deletion,1,,-1,-1,,,True,1_224013872,181,1_224013872_181,1_224013872_181
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,225902277,174413607,-51488670,translocation,2,5UTRintron,1,2,LEFTY1,ENST00000492457,True,1_225902277,183,1_225902277_183,1_225902277_183
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,236960025,39734634,-197225391,translocation,8,,-1,-1,,,True,1_236960025,197,1_236960025_197,1_236960025_197
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr1,237884554,242333380,4448826,inversion,1,intron,10,13,ZP4,ENST00000611898,True,1_237884554,198,1_237884554_198,1_237884554_198
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr2,65386929,55081088,-10305841,translocation,20,intron,1,6,SPRED2,ENST00000356388,True,2_65386929,1671,2_65386929_1671,2_65386929_1671
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr5,157375596,56876170,-100499426,translocation,Y,intron,27,32,CYFIP2,ENST00000616178,True,5_157375596,1730,5_157375596_1730,5_157375596_1730
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr7,63836066,67962933,4126867,tandem-duplication,7,,-1,-1,,,True,7_63836066,1739,7_63836066_1739,7_63836066_1739
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr8,141550926,141551528,602,deletion,8,,-1,-1,,,True,8_141550926,1750,8_141550926_1750,8_141550926_1750
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr11,76931816,59035913,-17895903,translocation,16,intron,2,11,ACER3,ENST00000532485,True,11_76931816,1752,11_76931816_1752,11_76931816_1752
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr12,12415441,9703221,-2712220,translocation,4,intron,2,4,BORCS5,ENST00000314565,True,12_12415441,1703,12_12415441_1703,12_12415441_1703
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr12,47591567,47753189,161622,inversion,12,,-1,-1,,,True,12_47591567,1756,12_47591567_1756,12_47591567_1756
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr12,47748834,47749492,658,inversion,12,exon,11,28,RAPGEF3,ENST00000449771,True,12_47748834,1757,12_47748834_1757,12_47748834_1757
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr12,66057592,75846819,9789227,translocation,4,,-1,-1,,,True,12_66057592,1726,12_66057592_1726,12_66057592_1726
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr12,66057592,44012578,-22045014,translocation,13,,-1,-1,,,True,12_66057592,1758,12_66057592_1758,12_66057592_1758
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr13,113346384,113347042,658,deletion,13,intron,4,6,GRTP1,ENST00000620217,True,13_113346384,1760,13_113346384_1760,13_113346384_1760
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr17,17818267,36037622,18219355,translocation,21,exon,7,20,SREBF1,ENST00000355815,True,17_17818267,1767,17_17818267_1767,17_17818267_1767
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr18,21272592,21284901,12309,inversion,18,5UTRintron,1,33,GREB1L,ENST00000424526,True,18_21272592,1771,18_21272592_1771,18_21272592_1771
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr18,23022677,6803104,-16219573,translocation,X,intron,18,19,RBBP8,ENST00000399722,True,18_23022677,1772,18_23022677_1772,18_23022677_1772
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr18,51069740,51090906,21166,tandem-duplication,18,intron,10,12,SMAD4,ENST00000342988,True,18_51069740,1773,18_51069740_1773,18_51069740_1773
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr19,10704328,14604677,3900349,deletion,19,intron,3,10,QTRT1,ENST00000250237,True,19_10704328,1777,19_10704328_1777,19_10704328_1777
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr19,16438032,18608670,2170638,tandem-duplication,19,intron,4,24,EPS15L1,ENST00000455140,True,19_16438032,1778,19_16438032_1778,19_16438032_1778
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr19,18907280,112680425,93773145,translocation,8,intron,3,11,COPE,ENST00000600932,True,19_18907280,1748,19_18907280_1748,19_18907280_1748
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chr19,18917203,72207969,53290766,translocation,8,intron,1,11,COPE,ENST00000600932,True,19_18917203,1747,19_18917203_1747,19_18917203_1747
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,15661024,15895075,234051,tandem-duplication,1,exon,1,1,RSC1A1,ENST00000345034,True,1_15661024,21,1_15661024_21,1_15661024_21
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,109927210,8219854,-101707356,translocation,21,3UTRintron,8,9,CSF1,ENST00000329608,True,1_109927210,69,1_109927210_69,1_109927210_69
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,118366307,118815362,449055,tandem-duplication,1,,-1,-1,,,True,1_118366307,71,1_118366307_71,1_118366307_71
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,118584049,146958057,28374008,deletion,1,,-1,-1,,,True,1_118584049,73,1_118584049_73,1_118584049_73
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,118807899,38695893,-80112006,translocation,8,,-1,-1,,,True,1_118807899,77,1_118807899_77,1_118807899_77
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,118815732,161559741,42744009,tandem-duplication,1,,-1,-1,,,True,1_118815732,75,1_118815732_75,1_118815732_75
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,119173137,234269423,115096286,deletion,1,,-1,-1,,,True,1_119173137,79,1_119173137_79,1_119173137_79
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,122404885,124942852,2537967,inversion,1,,-1,-1,,,True,1_122404885,86,1_122404885_86,1_122404885_86
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,152756502,153839999,1083497,deletion,1,,-1,-1,,,True,1_152756502,104,1_152756502_104,1_152756502_104
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,152773368,225240097,72466729,inversion,1,,-1,-1,,,True,1_152773368,105,1_152773368_105,1_152773368_105
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,152988892,42161939,-110826953,translocation,9,,-1,-1,,,True,1_152988892,106,1_152988892_106,1_152988892_106
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,154059607,154065919,6312,inversion,1,intron,20,40,NUP210L,ENST00000368559,True,1_154059607,109,1_154059607_109,1_154059607_109
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,154062768,154073741,10973,tandem-duplication,1,intron,17,40,NUP210L,ENST00000368559,True,1_154062768,111,1_154062768_111,1_154062768_111
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,154071604,154565263,493659,inversion,1,intron,16,40,NUP210L,ENST00000368559,True,1_154071604,110,1_154071604_110,1_154071604_110
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,155799443,155799690,247,inversion,1,intron,11,32,GON4L,ENST00000368331,True,1_155799443,115,1_155799443_115,1_155799443_115
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,155799447,217877329,62077882,tandem-duplication,1,intron,11,32,GON4L,ENST00000368331,True,1_155799447,116,1_155799447_116,1_155799447_116
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,158575486,236175318,77599832,inversion,1,,-1,-1,,,True,1_158575486,121,1_158575486_121,1_158575486_121
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,159688507,159877142,188635,tandem-duplication,1,,-1,-1,,,True,1_159688507,125,1_159688507_125,1_159688507_125
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,160318513,235933227,75614714,tandem-duplication,1,intron,8,33,COPA,ENST00000368069,True,1_160318513,128,1_160318513_128,1_160318513_128
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,161007921,163270575,2262654,inversion,1,intron,1,10,F11R,ENST00000368026,True,1_161007921,132,1_161007921_132,1_161007921_132
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,161543585,221711432,60167847,inversion,1,intron,4,5,FCGR3A,ENST00000443193,True,1_161543585,133,1_161543585_133,1_161543585_133
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,162561376,217875475,55314099,inversion,1,,-1,-1,,,True,1_162561376,137,1_162561376_137,1_162561376_137
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,163310321,236832010,73521689,inversion,1,5UTRintron,1,6,RGS5,ENST00000618415,True,1_163310321,140,1_163310321_140,1_163310321_140
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,167689033,221146776,53457743,inversion,1,intron,3,7,RCSD1,ENST00000367854,True,1_167689033,145,1_167689033_145,1_167689033_145
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,169183171,231274360,62091189,inversion,1,intron,10,12,NME7,ENST00000367811,True,1_169183171,146,1_169183171_146,1_169183171_146
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,172339976,219621799,47281823,deletion,1,intron,17,21,DNM3,ENST00000627582,True,1_172339976,149,1_172339976_149,1_172339976_149
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,174113801,187087225,12973424,tandem-duplication,1,,-1,-1,,,True,1_174113801,150,1_174113801_150,1_174113801_150
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,175007371,176405439,1398068,inversion,1,intron,4,6,CACYBP,ENST00000367679,True,1_175007371,152,1_175007371_152,1_175007371_152
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,175851376,209660937,33809561,inversion,1,,-1,-1,,,True,1_175851376,154,1_175851376_154,1_175851376_154
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,175851382,209660937,33809555,tandem-duplication,1,,-1,-1,,,True,1_175851382,153,1_175851382_153,1_175851382_153
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,176837686,199525070,22687384,tandem-duplication,1,intron,21,23,PAPPA2,ENST00000367662,True,1_176837686,156,1_176837686_156,1_176837686_156
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,176940896,233396398,56455502,tandem-duplication,1,intron,14,23,ASTN1,ENST00000367657,True,1_176940896,158,1_176940896_158,1_176940896_158
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,185583403,185583522,119,inversion,1,UTRintron,2,4,LINC01350,ENST00000608417,True,1_185583403,164,1_185583403_164,1_185583403_164
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,185583511,215810958,30227447,inversion,1,UTRintron,2,4,LINC01350,ENST00000608417,True,1_185583511,165,1_185583511_165,1_185583511_165
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,185583521,215810958,30227437,deletion,1,UTRintron,2,4,LINC01350,ENST00000608417,True,1_185583521,163,1_185583521_163,1_185583521_163
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,199210701,208921095,9710394,tandem-duplication,1,UTRintron,3,4,AC099673.1,ENST00000452199,True,1_199210701,180,1_199210701_180,1_199210701_180
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,199210701,208921097,9710396,inversion,1,UTRintron,3,4,AC099673.1,ENST00000452199,True,1_199210701,181,1_199210701_181,1_199210701_181
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,199495313,199496748,1435,inversion,1,,-1,-1,,,True,1_199495313,182,1_199495313_182,1_199495313_182
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,199495317,199496761,1444,inversion,1,,-1,-1,,,True,1_199495317,183,1_199495317_183,1_199495317_183
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,209256807,39034404,-170222403,translocation,8,,-1,-1,,,True,1_209256807,189,1_209256807_189,1_209256807_189
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,217874753,217875113,360,inversion,1,,-1,-1,,,True,1_217874753,194,1_217874753_194,1_217874753_194
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,219285811,220394579,1108768,inversion,1,,-1,-1,,,True,1_219285811,196,1_219285811_196,1_219285811_196
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,224013872,224014764,892,deletion,1,,-1,-1,,,True,1_224013872,203,1_224013872_203,1_224013872_203
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,229710697,230163331,452634,inversion,1,,-1,-1,,,True,1_229710697,211,1_229710697_211,1_229710697_211
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,230379328,230512437,133109,inversion,1,intron,1,7,PGBD5,ENST00000391860,True,1_230379328,212,1_230379328_212,1_230379328_212
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,230510913,232200178,1689265,tandem-duplication,1,,-1,-1,,,True,1_230510913,215,1_230510913_215,1_230510913_215
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,231957249,231962876,5627,inversion,1,intron,9,10,DISC1,ENST00000535983,True,1_231957249,217,1_231957249_217,1_231957249_217
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,234590127,235952420,1362293,deletion,1,,-1,-1,,,True,1_234590127,220,1_234590127_220,1_234590127_220
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,236960025,39734634,-197225391,translocation,8,,-1,-1,,,True,1_236960025,228,1_236960025_228,1_236960025_228
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,237872450,43295332,-194577118,translocation,8,,-1,-1,,,True,1_237872450,229,1_237872450_229,1_237872450_229
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,237884554,242333382,4448828,inversion,1,intron,10,13,ZP4,ENST00000611898,True,1_237884554,230,1_237884554_230,1_237884554_230
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,241450382,42103151,-199347231,translocation,8,,-1,-1,,,True,1_241450382,233,1_241450382_233,1_241450382_233
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr1,248213409,47115750,-201097659,translocation,16,,-1,-1,,,True,1_248213409,237,1_248213409_237,1_248213409_237
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr2,53803470,1397129,-52406341,translocation,6,intron,1,10,GPR75-ASB3,ENST00000406625,True,2_53803470,1465,2_53803470_1465,2_53803470_1465
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr3,105762433,107388078,1625645,tandem-duplication,3,intron,4,19,CBLB,ENST00000264122,True,3_105762433,1498,3_105762433_1498,3_105762433_1498
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr3,168468658,170542536,2073878,tandem-duplication,3,,-1,-1,,,True,3_168468658,1499,3_168468658_1499,3_168468658_1499
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr3,187047936,29901390,-157146546,translocation,6,5UTRintron,3,7,ST6GAL1,ENST00000457772,True,3_187047936,1501,3_187047936_1501,3_187047936_1501
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr4,90250514,90271593,21079,deletion,4,5UTRintron,1,11,CCSER1,ENST00000509176,True,4_90250514,1534,4_90250514_1534,4_90250514_1534
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr5,148270651,148799269,528618,tandem-duplication,5,intron,3,6,SPINK13,ENST00000512953,True,5_148270651,1542,5_148270651_1542,5_148270651_1542
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr6,64733358,64734328,970,inversion,6,intron,22,43,EYS,ENST00000503581,True,6_64733358,1553,6_64733358_1553,6_64733358_1553
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr6,148395394,148730435,335041,tandem-duplication,6,intron,2,20,SASH1,ENST00000367467,True,6_148395394,1554,6_148395394_1554,6_148395394_1554
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr7,141452432,141594473,142041,tandem-duplication,7,intron,3,4,TMEM178B,ENST00000565468,True,7_141452432,1567,7_141452432_1567,7_141452432_1567
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr7,156876935,157104939,228004,tandem-duplication,7,intron,1,17,LMBR1,ENST00000353442,True,7_156876935,1572,7_156876935_1572,7_156876935_1572
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr8,41756999,68200546,26443547,deletion,8,intron,2,42,ANK1,ENST00000347528,True,8_41756999,1575,8_41756999_1575,8_41756999_1575
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr8,64139704,67580188,3440484,tandem-duplication,8,,-1,-1,,,True,8_64139704,1581,8_64139704_1581,8_64139704_1581
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr8,68305587,68318794,13207,deletion,8,,-1,-1,,,True,8_68305587,1582,8_68305587_1582,8_68305587_1582
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr8,72188476,72208497,20021,tandem-duplication,8,,-1,-1,,,True,8_72188476,1583,8_72188476_1583,8_72188476_1583
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr8,72189450,72190817,1367,inversion,8,,-1,-1,,,True,8_72189450,1585,8_72189450_1585,8_72189450_1585
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr8,72190177,112684267,40494090,inversion,8,,-1,-1,,,True,8_72190177,1588,8_72190177_1588,8_72190177_1588
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr9,24018143,24032141,13998,deletion,9,,-1,-1,,,True,9_24018143,1592,9_24018143_1592,9_24018143_1592
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr9,42310834,42333047,22213,deletion,9,UTRintron,1,4,AL445584.2,ENST00000614030,True,9_42310834,1593,9_42310834_1593,9_42310834_1593
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr10,37068150,37414271,346121,inversion,10,,-1,-1,,,True,10_37068150,1596,10_37068150_1596,10_37068150_1596
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr10,121398408,90090735,-31307673,translocation,4,,-1,-1,,,True,10_121398408,1533,10_121398408_1533,10_121398408_1533
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,45595367,90367875,44772508,inversion,12,UTRintron,2,5,AC079950.1,ENST00000551229,True,12_45595367,1605,12_45595367_1605,12_45595367_1605
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,47591567,47753148,161581,inversion,12,,-1,-1,,,True,12_47591567,1606,12_47591567_1606,12_47591567_1606
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,47748834,47749492,658,inversion,12,exon,11,28,RAPGEF3,ENST00000449771,True,12_47748834,1607,12_47748834_1607,12_47748834_1607
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,48050387,61184068,13133681,deletion,12,intron,13,18,SENP1,ENST00000448372,True,12_48050387,1608,12_48050387_1608,12_48050387_1608
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,60018563,60019727,1164,deletion,12,,-1,-1,,,True,12_60018563,1609,12_60018563_1609,12_60018563_1609
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,66057592,86943411,20885819,translocation,2,,-1,-1,,,True,12_66057592,1467,12_66057592_1467,12_66057592_1467
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,79899438,80166093,266655,deletion,12,5UTRintron,1,25,PPP1R12A,ENST00000546369,True,12_79899438,1612,12_79899438_1612,12_79899438_1612
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,86217748,123913375,37695627,inversion,12,5UTRintron,1,8,MGAT4C,ENST00000620241,True,12_86217748,1613,12_86217748_1613,12_86217748_1613
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,86335882,86336296,414,inversion,12,5UTRintron,3,9,MGAT4C,ENST00000621808,True,12_86335882,1615,12_86335882_1615,12_86335882_1615
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr12,86336403,109745908,23409505,deletion,12,5UTRintron,3,9,MGAT4C,ENST00000621808,True,12_86336403,1614,12_86336403_1614,12_86336403_1614
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr13,33022893,33590912,568019,tandem-duplication,13,intron,1,5,KL,ENST00000380099,True,13_33022893,1619,13_33022893_1619,13_33022893_1619
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr13,55708467,137604643,81896176,translocation,9,,-1,-1,,,True,13_55708467,1595,13_55708467_1595,13_55708467_1595
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr13,113346019,113347689,1670,deletion,13,intron,4,6,GRTP1,ENST00000620217,True,13_113346019,1620,13_113346019_1620,13_113346019_1620
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr14,21267784,21268964,1180,tandem-duplication,14,5UTRintron,1,10,HNRNPC,ENST00000554969,True,14_21267784,1622,14_21267784_1622,14_21267784_1622
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr14,38539628,37821765,-717863,translocation,22,,-1,-1,,,True,14_38539628,1623,14_38539628_1623,14_38539628_1623
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr17,7251824,7567255,315431,tandem-duplication,17,5UTRintron,1,9,CTDNEP1,ENST00000573600,True,17_7251824,1637,17_7251824_1637,17_7251824_1637
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr17,17818267,36037622,18219355,translocation,21,exon,7,20,SREBF1,ENST00000355815,True,17_17818267,1638,17_17818267_1638,17_17818267_1638
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr17,80743889,80744809,920,deletion,17,intron,5,34,RPTOR,ENST00000306801,True,17_80743889,1642,17_80743889_1642,17_80743889_1642
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr18,21272592,21284901,12309,inversion,18,5UTRintron,1,33,GREB1L,ENST00000424526,True,18_21272592,1645,18_21272592_1645,18_21272592_1645
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr18,26198685,58649438,32450753,deletion,18,,-1,-1,,,True,18_26198685,1646,18_26198685_1646,18_26198685_1646
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr18,51015936,51090281,74345,deletion,18,,-1,-1,,,True,18_51015936,1648,18_51015936_1648,18_51015936_1648
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr18,51069740,51090906,21166,tandem-duplication,18,intron,10,12,SMAD4,ENST00000342988,True,18_51069740,1649,18_51069740_1649,18_51069740_1649
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr18,68090424,18288134,-49802290,translocation,19,,-1,-1,,,True,18_68090424,1650,18_68090424_1650,18_68090424_1650
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,5601134,43291165,37690031,translocation,8,intron,11,21,SAFB2,ENST00000252542,True,19_5601134,1579,19_5601134_1579,19_5601134_1579
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,5602795,42115895,36513100,translocation,8,intron,11,21,SAFB2,ENST00000252542,True,19_5602795,1576,19_5602795_1576,19_5602795_1576
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,5623721,43303570,37679849,translocation,8,intron,1,21,SAFB,ENST00000588852,True,19_5623721,1580,19_5623721_1580,19_5623721_1580
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,6344195,85237154,78892959,translocation,3,,-1,-1,,,True,19_6344195,1483,19_6344195_1483,19_6344195_1483
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,8410384,8412717,2333,inversion,19,,-1,-1,,,True,19_8410384,1652,19_8410384_1652,19_8410384_1652
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,10704328,14604677,3900349,deletion,19,intron,3,10,QTRT1,ENST00000250237,True,19_10704328,1653,19_10704328_1653,19_10704328_1653
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,15778314,15779412,1098,deletion,19,,-1,-1,,,True,19_15778314,1655,19_15778314_1655,19_15778314_1655
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,16438032,18608670,2170638,tandem-duplication,19,intron,4,24,EPS15L1,ENST00000455140,True,19_16438032,1656,19_16438032_1656,19_16438032_1656
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,18907576,72188671,53281095,translocation,8,intron,3,11,COPE,ENST00000600932,True,19_18907576,1584,19_18907576_1584,19_18907576_1584
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,18907760,72189613,53281853,translocation,8,intron,3,11,COPE,ENST00000600932,True,19_18907760,1586,19_18907760_1586,19_18907760_1586
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,18917203,72207975,53290772,translocation,8,intron,1,11,COPE,ENST00000600932,True,19_18917203,1587,19_18917203_1587,19_18917203_1587
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,18918013,112647743,93729730,translocation,8,intron,1,11,COPE,ENST00000600932,True,19_18918013,1590,19_18918013_1590,19_18918013_1590
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr19,22857900,72191815,49333915,translocation,8,,-1,-1,,,True,19_22857900,1589,19_22857900_1589,19_22857900_1589
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr20,7418059,7422947,4888,deletion,20,,-1,-1,,,True,20_7418059,1657,20_7418059_1657,20_7418059_1657
t6_PDAC_case15_S11,PDAC_case15_S11,case15_S11_PDAC,case15,case15_S11,PDAC,t6,chr20,64131888,64132677,789,deletion,20,,-1,-1,,,True,20_64131888,1665,20_64131888_1665,20_64131888_1665
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr1,56353739,99651184,43297445,translocation,9,UTRintron,1,8,AC119674.1,ENST00000641611,True,1_56353739,69,1_56353739_69,1_56353739_69
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr1,205255337,56665390,-148589947,translocation,12,intron,2,5,TMCC2,ENST00000358024,True,1_205255337,192,1_205255337_192,1_205255337_192
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr2,95247415,38665533,-56581882,translocation,20,intron,4,5,AC092835.1,ENST00000614286,True,2_95247415,2375,2_95247415_2375,2_95247415_2375
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr3,197388672,197390834,2162,deletion,3,,-1,-1,,,True,3_197388672,2395,3_197388672_2395,3_197388672_2395
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr4,1707296,107437177,105729881,translocation,5,intron,2,8,SLBP,ENST00000489418,True,4_1707296,2396,4_1707296_2396,4_1707296_2396
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr11,12578593,6692181,-5886412,translocation,17,,-1,-1,,,True,11_12578593,2466,11_12578593_2466,11_12578593_2466
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr12,66057592,65979183,-78409,translocation,3,,-1,-1,,,True,12_66057592,2379,12_66057592_2379,12_66057592_2379
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr12,66057592,96004654,29947062,translocation,13,,-1,-1,,,True,12_66057592,2470,12_66057592_2470,12_66057592_2470
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr12,95839810,154493530,58653720,translocation,7,,-1,-1,,,True,12_95839810,2458,12_95839810_2458,12_95839810_2458
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr13,113346069,113347040,971,deletion,13,intron,4,6,GRTP1,ENST00000620217,True,13_113346069,2475,13_113346069_2475,13_113346069_2475
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr14,29258897,35945143,6686246,translocation,17,,-1,-1,,,True,14_29258897,2476,14_29258897_2476,14_29258897_2476
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr16,34098021,34099745,1724,deletion,16,,-1,-1,,,True,16_34098021,2486,16_34098021_2486,16_34098021_2486
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr17,26937258,26938077,819,deletion,17,,-1,-1,,,True,17_26937258,2492,17_26937258_2492,17_26937258_2492
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr17,80743889,80744847,958,deletion,17,intron,5,34,RPTOR,ENST00000306801,True,17_80743889,2495,17_80743889_2495,17_80743889_2495
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr18,4771510,4200634,-570876,translocation,4,,-1,-1,,,True,18_4771510,2397,18_4771510_2397,18_4771510_2397
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr18,23022606,6803095,-16219511,translocation,X,intron,18,19,RBBP8,ENST00000399722,True,18_23022606,2499,18_23022606_2499,18_23022606_2499
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chr19,17463786,140362277,122898491,translocation,4,,-1,-1,,,True,19_17463786,2432,19_17463786_2432,19_17463786_2432
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr1,15225777,30323725,15097948,translocation,5,,-1,-1,,,True,1_15225777,16,1_15225777_16,1_15225777_16
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr1,96746825,109353483,12606658,translocation,2,intron,2,14,PTBP2,ENST00000609116,True,1_96746825,73,1_96746825_73,1_96746825_73
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr1,177720710,143229891,-34490819,translocation,6,,-1,-1,,,True,1_177720710,118,1_177720710_118,1_177720710_118
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr2,75156357,79243896,4087539,translocation,X,intron,1,5,TACR1,ENST00000305249,True,2_75156357,1732,2_75156357_1732,2_75156357_1732
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr3,164407824,5776993,-158630831,translocation,7,,-1,-1,,,True,3_164407824,1759,3_164407824_1759,3_164407824_1759
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr4,6003579,6004584,1005,deletion,4,intron,3,12,C4orf50,ENST00000531445,True,4_6003579,1767,4_6003579_1767,4_6003579_1767
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr4,158351681,14510868,-143840813,translocation,Y,5UTRintron,1,20,RXFP1,ENST00000460056,True,4_158351681,1793,4_158351681_1793,4_158351681_1793
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr4,188506836,188508143,1307,deletion,4,UTRintron,1,2,LINC01060,ENST00000503580,True,4_188506836,1795,4_188506836_1795,4_188506836_1795
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr6,106243871,94173070,-12070801,translocation,7,intron,6,8,ATG5,ENST00000369076,True,6_106243871,1806,6_106243871_1806,6_106243871_1806
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr7,41747473,130577071,88829598,translocation,9,,-1,-1,,,True,7_41747473,1810,7_41747473_1810,7_41747473_1810
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr11,63105920,7028904,-56077016,translocation,6,intron,4,10,SLC22A24,ENST00000612278,True,11_63105920,1798,11_63105920_1798,11_63105920_1798
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr12,66057591,223746867,157689276,translocation,2,,-1,-1,,,True,12_66057591,1750,12_66057591_1750,12_66057591_1750
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr12,66057592,91606975,25549383,translocation,14,,-1,-1,,,True,12_66057592,1833,12_66057592_1833,12_66057592_1833
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr12,104813258,11935203,-92878055,translocation,X,intron,9,10,SLC41A2,ENST00000258538,True,12_104813258,1834,12_104813258_1834,12_104813258_1834
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr12,131579593,131580976,1383,deletion,12,,-1,-1,,,True,12_131579593,1835,12_131579593_1835,12_131579593_1835
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr14,85504031,15489961,-70014070,translocation,17,UTRintron,1,5,AL049775.2,ENST00000557547,True,14_85504031,1837,14_85504031_1837,14_85504031_1837
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr16,30063095,2353667,-27709428,translocation,X,5UTRintron,4,14,ALDOA,ENST00000338110,True,16_30063095,1842,16_30063095_1842,16_30063095_1842
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr17,80743852,80744812,960,deletion,17,intron,5,34,RPTOR,ENST00000306801,True,17_80743852,1849,17_80743852_1849,17_80743852_1849
t2_IPMN_LGD_case15_S3,IPMN_LGD_case15_S3,case15_S3_IPMN_LGD,case15,case15_S3,IPMN_LGD,t2,chr21,31784401,31785286,885,deletion,21,,-1,-1,,,True,21_31784401,1865,21_31784401_1865,21_31784401_1865
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr1,70269060,66057591,-4211469,translocation,12,intron,12,13,ANKRD13C,ENST00000370944,True,1_70269060,52,1_70269060_52,1_70269060_52
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr2,1703239,1704396,1157,deletion,2,intron,1,23,PXDN,ENST00000252804,True,2_1703239,183,2_1703239_183,2_1703239_183
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr3,197388378,197390589,2211,deletion,3,,-1,-1,,,True,3_197388378,1858,3_197388378_1858,3_197388378_1858
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr9,21841343,23314563,1473220,deletion,9,intron,5,8,MTAP,ENST00000380172,True,9_21841343,1917,9_21841343_1917,9_21841343_1917
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr9,26061167,27117836,1056669,inversion,9,,-1,-1,,,True,9_26061167,1918,9_26061167_1918,9_26061167_1918
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr9,26061198,27117903,1056705,inversion,9,,-1,-1,,,True,9_26061198,1919,9_26061198_1919,9_26061198_1919
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr10,123114693,52045082,-71069611,translocation,7,,-1,-1,,,True,10_123114693,1906,10_123114693_1906,10_123114693_1906
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr11,85833148,17050143,-68783005,translocation,X,,-1,-1,,,True,11_85833148,1923,11_85833148_1923,11_85833148_1923
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr11,97883057,45661194,-52221863,translocation,6,UTRintron,3,4,AP003730.2,ENST00000526385,True,11_97883057,1901,11_97883057_1901,11_97883057_1901
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr15,100962794,111422672,10459878,translocation,6,intron,2,34,LRRK1,ENST00000388948,True,15_100962794,1902,15_100962794_1902,15_100962794_1902
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr17,80744197,80744649,452,deletion,17,intron,5,34,RPTOR,ENST00000306801,True,17_80744197,1937,17_80744197_1937,17_80744197_1937
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr20,20356592,20357427,835,deletion,20,intron,26,27,CFAP61,ENST00000245957,True,20_20356592,1939,20_20356592_1939,20_20356592_1939
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr21,41474785,41475378,593,deletion,21,intron,8,14,TMPRSS2,ENST00000398585,True,21_41474785,1954,21_41474785_1954,21_41474785_1954
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chr21,43337075,44254776,917701,translocation,7,,-1,-1,,,True,21_43337075,1905,21_43337075_1905,21_43337075_1905
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr1,84178228,151758924,67580696,inversion,chr1,intron,1,10,PRKACB,ENST00000370689,True,1_84178228,32,1_84178228_32,1_84178228_32
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr1,151755317,185603714,33848397,inversion,chr1,,-1,-1,,,True,1_151755317,47,1_151755317_47,1_151755317_47
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr1,151759536,169110976,17351439,inversion,chr1,,-1,-1,,,True,1_151759536,48,1_151759536_48,1_151759536_48
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr1,151855890,202070440,50214550,inversion,chr1,,-1,-1,,,True,1_151855890,49,1_151855890_49,1_151855890_49
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr1,213209249,122857336,-90351913,translocation,chr7,5UTRintron,8,13,RPS6KC1,ENST00000615329,True,1_213209249,71,1_213209249_71,1_213209249_71
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr2,87907462,24207720,-63699742,translocation,chr5,,-1,-1,,,True,2_87907462,954,2_87907462_954,2_87907462_954
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr2,90324001,90325305,1304,deletion,chr2,,-1,-1,,,True,2_90324001,959,2_90324001_959,2_90324001_959
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr2,130000878,115580959,-14419921,translocation,chr4,,-1,-1,,,True,2_130000878,962,2_130000878_962,2_130000878_962
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr2,227393458,73054928,-154338530,translocation,chr18,,-1,-1,,,True,2_227393458,968,2_227393458_968,2_227393458_968
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr3,44698739,45199859,501120,deletion,chr3,,-1,-1,,,True,3_44698739,970,3_44698739_970,3_44698739_970
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr3,122762629,123952779,1190150,deletion,chr3,intron,3,8,HSPBAP1,ENST00000306103,True,3_122762629,980,3_122762629_980,3_122762629_980
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,1707296,30794320,29087024,translocation,chr10,intron,2,8,SLBP,ENST00000489418,True,4_1707296,983,4_1707296_983,4_1707296_983
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,63147474,64277205,1129731,deletion,chr4,,-1,-1,,,True,4_63147474,993,4_63147474_993,4_63147474_993
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,64268358,64577774,309416,deletion,chr4,,-1,-1,,,True,4_64268358,994,4_64268358_994,4_64268358_994
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,97022978,102448463,5425485,deletion,chr4,,-1,-1,,,True,4_97022978,995,4_97022978_995,4_97022978_995
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,100042610,168931503,68888891,inversion,chr4,,-1,-1,,,True,4_100042610,996,4_100042610_996,4_100042610_996
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,100042631,188435797,88393166,tandem-duplication,chr4,,-1,-1,,,True,4_100042631,997,4_100042631_997,4_100042631_997
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,103086123,78944512,-24141611,translocation,chr7,intron,6,10,BDH2,ENST00000296424,True,4_103086123,998,4_103086123_998,4_103086123_998
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,186765427,76203031,-110562396,translocation,chr7,,-1,-1,,,True,4_186765427,1000,4_186765427_1000,4_186765427_1000
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr4,187601590,188708443,1106853,tandem-duplication,chr4,UTRintron,2,3,LINC02492,ENST00000507817,True,4_187601590,1001,4_187601590_1001,4_187601590_1001
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr5,55106011,71592596,16486585,translocation,chr7,intron,2,5,GZMA,ENST00000274306,True,5_55106011,1002,5_55106011_1002,5_55106011_1002
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr6,157027599,157202872,175273,deletion,chr6,intron,5,20,ARID1B,ENST00000346085,True,6_157027599,1003,6_157027599_1003,6_157027599_1003
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr6,159711829,159712485,656,deletion,chr6,5UTRintron,3,8,SOD2,ENST00000546087,True,6_159711829,1004,6_159711829_1004,6_159711829_1004
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr7,19056245,19820984,764739,inversion,chr7,,-1,-1,,,True,7_19056245,1005,7_19056245_1005,7_19056245_1005
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr7,66566716,123003972,56437256,inversion,chr7,,-1,-1,,,True,7_66566716,1006,7_66566716_1006,7_66566716_1006
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr7,71845583,127336236,55490653,deletion,chr7,intron,5,7,CALN1,ENST00000395275,True,7_71845583,1007,7_71845583_1007,7_71845583_1007
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr7,158340899,158342256,1357,deletion,chr7,intron,2,22,PTPRN2,ENST00000389413,True,7_158340899,1011,7_158340899_1011,7_158340899_1011
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,1117938,12726556,11608618,inversion,chr9,,-1,-1,,,True,9_1117938,1017,9_1117938_1017,9_1117938_1017
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,1715942,70371582,68655640,translocation,chr12,,-1,-1,,,True,9_1715942,1018,9_1715942_1018,9_1715942_1018
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,12811899,17281278,4469379,deletion,chr9,intron,1,2,LURAP1L,ENST00000319264,True,9_12811899,1019,9_12811899_1019,9_12811899_1019
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,21700215,23589557,1889342,deletion,chr9,,-1,-1,,,True,9_21700215,1020,9_21700215_1020,9_21700215_1020
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,32416539,32425542,9001,inversion,chr9,intron,4,21,ACO1,ENST00000309951,True,9_32416539,1021,9_32416539_1021,9_32416539_1021
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,36431105,36477946,46836,inversion,chr9,,-1,-1,,,True,9_36431105,1022,9_36431105_1022,9_36431105_1022
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr9,36454883,36485221,30338,inversion,chr9,,-1,-1,,,True,9_36454883,1023,9_36454883_1023,9_36454883_1023
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,60314546,69767066,9452520,tandem-duplication,chr12,,-1,-1,,,True,12_60314546,1036,12_60314546_1036,12_60314546_1036
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,60315271,66170120,5854849,deletion,chr12,,-1,-1,,,True,12_60315271,1035,12_60315271_1035,12_60315271_1035
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,66057592,36528798,-29528794,translocation,chr13,,-1,-1,,,True,12_66057592,1037,12_66057592_1037,12_66057592_1037
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,68668204,69164266,496061,inversion,chr12,3UTRexon,8,8,RAP1B,ENST00000250559,True,12_68668204,1038,12_68668204_1038,12_68668204_1038
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,68850013,68985461,135448,deletion,chr12,3UTRexon,11,11,MDM2,ENST00000258149,True,12_68850013,1039,12_68850013_1039,12_68850013_1039
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,69080099,69081268,1169,inversion,chr12,,-1,-1,,,True,12_69080099,1040,12_69080099_1040,12_69080099_1040
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,69673872,69675133,1261,inversion,chr12,intron,7,10,BEST3,ENST00000331471,True,12_69673872,1041,12_69673872_1041,12_69673872_1041
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr12,70791982,70793082,1100,inversion,chr12,intron,2,14,PTPRR,ENST00000283228,True,12_70791982,1042,12_70791982_1042,12_70791982_1042
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,26965177,30077069,3111892,tandem-duplication,chr13,,-1,-1,,,True,13_26965177,1044,13_26965177_1044,13_26965177_1044
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,27067986,27891220,823234,tandem-duplication,chr13,3UTRexon,9,9,USP12,ENST00000282344,True,13_27067986,1045,13_27067986_1045,13_27067986_1045
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,29243100,21841705,-7401395,translocation,chr18,intron,5,16,MTUS2,ENST00000612955,True,13_29243100,1046,13_29243100_1046,13_29243100_1046
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,29598936,31943678,2344740,inversion,chr13,,-1,-1,,,True,13_29598936,1047,13_29598936_1047,13_29598936_1047
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,29614492,53695673,24081181,translocation,chr18,,-1,-1,,,True,13_29614492,1048,13_29614492_1048,13_29614492_1048
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,32467755,53546680,21078925,translocation,chr18,intron,6,10,N4BP2L2,ENST00000399396,True,13_32467755,1049,13_32467755_1049,13_32467755_1049
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,33135250,53547422,20412172,translocation,chr18,intron,4,14,STARD13,ENST00000336934,True,13_33135250,1050,13_33135250_1050,13_33135250_1050
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr13,46560579,46563519,2940,deletion,chr13,intron,1,19,LRCH1,ENST00000311191,True,13_46560579,1051,13_46560579_1051,13_46560579_1051
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr19,1859064,3701295,1842231,inversion,chr19,intron,1,2,KLF16,ENST00000250916,True,19_1859064,1072,19_1859064_1072,19_1859064_1072
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr19,4182490,36921138,32738648,inversion,chr19,exon,1,8,SIRT6,ENST00000337491,True,19_4182490,1073,19_4182490_1073,19_4182490_1073
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr19,12853157,16146712,3293555,deletion,chr19,intron,10,26,MAST1,ENST00000251472,True,19_12853157,1074,19_12853157_1074,19_12853157_1074
t3_IPMN_HGD_case16_S2,IPMN_HGD_case16_S2,case16_S2_IPMN_HGD,case16,case16_S2,IPMN_HGD,t3,chr20,64132102,64133097,995,deletion,chr20,,-1,-1,,,True,20_64132102,1083,20_64132102_1083,20_64132102_1083
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,84178228,151758924,67580696,inversion,chr1,intron,1,10,PRKACB,ENST00000370689,True,1_84178228,34,1_84178228_34,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,151855890,202070440,50214550,inversion,chr1,,-1,-1,,,True,1_151855890,63,1_151855890_63,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,172534994,50846216,-121688779,translocation,chrX,intron,2,23,SUCO,ENST00000367723,True,1_172534994,72,1_172534994_72,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,184930208,185633281,703066,inversion,chr1,intron,1,14,FAM129A,ENST00000367511,True,1_184930208,77,1_184930208_77,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,212468434,1588439,-210879995,translocation,chrX,,-1,-1,,,True,1_212468434,95,1_212468434_95,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,213209249,122857336,-90351913,translocation,chr7,5UTRintron,8,13,RPS6KC1,ENST00000615329,True,1_213209249,96,1_213209249_96,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,213336320,66953502,-146382820,translocation,chr7,,-1,-1,,,True,1_213336320,97,1_213336320_97,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,224013872,224015074,1202,deletion,chr1,,-1,-1,,,True,1_224013872,101,1_224013872_101,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr1,240823905,66057591,-174766314,translocation,chr12,intron,10,18,RGS7,ENST00000366565,True,1_240823905,112,1_240823905_112,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr2,87907455,24207720,-63699735,translocation,chr5,,-1,-1,,,True,2_87907455,1565,2_87907455_1565,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr2,166222436,35455135,-130767301,translocation,chr19,intron,24,27,SCN9A,ENST00000409672,True,2_166222436,1573,2_166222436_1573,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr3,29804784,30035540,230756,deletion,chr3,intron,6,15,RBMS3,ENST00000383767,True,3_29804784,1574,3_29804784_1574,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr4,1707296,1631825,-75471,translocation,chr9,intron,2,8,SLBP,ENST00000489418,True,4_1707296,1581,4_1707296_1581,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr4,100042610,168931503,68888891,inversion,chr4,,-1,-1,,,True,4_100042610,1592,4_100042610_1592,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr4,100254312,152810047,52555735,translocation,chr7,,-1,-1,,,True,4_100254312,1593,4_100254312_1593,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr5,139950584,137000775,-2949809,translocation,chr9,intron,1,10,NRG2,ENST00000361474,True,5_139950584,1601,5_139950584_1601,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr6,157027599,157202872,175273,deletion,chr6,intron,5,20,ARID1B,ENST00000346085,True,6_157027599,1608,6_157027599_1608,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr6,170169862,170170475,613,deletion,chr6,,-1,-1,,,True,6_170169862,1609,6_170169862_1609,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr7,66566901,127336801,60769900,tandem-duplication,chr7,,-1,-1,,,True,7_66566901,1611,7_66566901_1611,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr7,72080202,42346941,-29733261,translocation,chr14,intron,4,7,CALN1,ENST00000395275,True,7_72080202,1612,7_72080202_1612,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr7,85083827,80170636,-4913191,translocation,chr8,intron,2,17,SEMA3D,ENST00000284136,True,7_85083827,1613,7_85083827_1613,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr7,158341425,158341915,490,deletion,chr7,intron,2,22,PTPRN2,ENST00000389413,True,7_158341425,1616,7_158341425_1616,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,532132,11641669,11109537,deletion,chr9,5UTRintron,3,16,KANK1,ENST00000382303,True,9_532132,1618,9_532132_1618,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1216165,1377838,161673,tandem-duplication,chr9,,-1,-1,,,True,9_1216165,1620,9_1216165_1620,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1219513,68766461,67546948,translocation,chr12,,-1,-1,,,True,9_1219513,1619,9_1219513_1619,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1231072,68599492,67368420,translocation,chr12,,-1,-1,,,True,9_1231072,1622,9_1231072_1622,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1231902,67200084,65968182,translocation,chr12,,-1,-1,,,True,9_1231902,1621,9_1231902_1621,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1232112,9602382,8370268,inversion,chr9,,-1,-1,,,True,9_1232112,1623,9_1232112_1623,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1233398,70603362,69369964,translocation,chr12,,-1,-1,,,True,9_1233398,1624,9_1233398_1624,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1367756,70535897,69168141,translocation,chr12,,-1,-1,,,True,9_1367756,1625,9_1367756_1625,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1421359,5333497,3912138,inversion,chr9,,-1,-1,,,True,9_1421359,1626,9_1421359_1626,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1594466,69062437,67467971,translocation,chr12,,-1,-1,,,True,9_1594466,1627,9_1594466_1627,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1674371,68701451,67027080,translocation,chr12,,-1,-1,,,True,9_1674371,1628,9_1674371_1628,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1704400,7590803,5886402,inversion,chr9,,-1,-1,,,True,9_1704400,1629,9_1704400_1629,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,1844884,12708257,10863372,inversion,chr9,,-1,-1,,,True,9_1844884,1630,9_1844884_1630,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,2558597,6688594,4129997,inversion,chr9,,-1,-1,,,True,9_2558597,1631,9_2558597_1631,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,2623696,6635793,4012097,inversion,chr9,intron,1,19,VLDLR,ENST00000382100,True,9_2623696,1632,9_2623696_1632,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,2641568,68813411,66171843,translocation,chr12,intron,4,19,VLDLR,ENST00000382100,True,9_2641568,1633,9_2641568_1633,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,2996638,4699960,1703320,inversion,chr9,,-1,-1,,,True,9_2996638,1634,9_2996638_1634,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,3595043,13417259,9822215,inversion,chr9,UTRintron,3,6,RFX3-AS1,ENST00000423112,True,9_3595043,1635,9_3595043_1635,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,3886864,7274456,3387592,inversion,chr9,intron,7,11,GLIS3,ENST00000381971,True,9_3886864,1636,9_3886864_1636,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4167309,66776556,62609247,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4167309,1637,9_4167309_1637,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4196447,70619497,66423050,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4196447,1638,9_4196447_1638,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4197901,67880540,63682639,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4197901,1639,9_4197901_1639,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4204504,9102140,4897636,inversion,chr9,intron,2,11,GLIS3,ENST00000381971,True,9_4204504,1642,9_4204504_1642,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4223533,67913813,63690280,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4223533,1640,9_4223533_1640,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4279734,67252871,62973137,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4279734,1641,9_4279734_1641,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,4318481,67214274,62895793,translocation,chr12,,-1,-1,,,True,9_4318481,1643,9_4318481_1643,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,5144509,8278755,3134246,tandem-duplication,chr9,,-1,-1,,,True,9_5144509,1644,9_5144509_1644,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,5169393,66659438,61490045,translocation,chr12,intron,1,2,INSL6,ENST00000381641,True,9_5169393,1645,9_5169393_1645,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,5234923,7229900,1994977,inversion,chr9,3UTRexon,2,2,INSL4,ENST00000239316,True,9_5234923,1646,9_5234923_1646,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,5246125,7023294,1777169,deletion,chr9,,-1,-1,,,True,9_5246125,1647,9_5246125_1647,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,5510744,69551622,64040878,translocation,chr12,5UTRexon,1,7,PDCD1LG2,ENST00000397747,True,9_5510744,1648,9_5510744_1648,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,5626257,62303257,56677000,translocation,chr12,,-1,-1,,,True,9_5626257,1649,9_5626257_1649,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,6266925,68104683,61837758,translocation,chr12,,-1,-1,,,True,9_6266925,1650,9_6266925_1650,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,6733416,11647903,4914487,inversion,chr9,intron,1,18,KDM4C,ENST00000536108,True,9_6733416,1651,9_6733416_1651,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,7022336,69832156,62809820,translocation,chr12,intron,15,18,KDM4C,ENST00000536108,True,9_7022336,1652,9_7022336_1652,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,7230473,70586975,63356502,translocation,chr12,,-1,-1,,,True,9_7230473,1653,9_7230473_1653,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,7403258,70558635,63155377,translocation,chr12,,-1,-1,,,True,9_7403258,1654,9_7403258_1654,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,7465991,17416864,9950873,tandem-duplication,chr9,,-1,-1,,,True,9_7465991,1655,9_7465991_1655,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,7521709,12743752,5222043,tandem-duplication,chr9,,-1,-1,,,True,9_7521709,1656,9_7521709_1656,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9138020,66765815,57627795,translocation,chr12,5UTRintron,7,43,PTPRD,ENST00000381196,True,9_9138020,1657,9_9138020_1657,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9584272,68609522,59025250,translocation,chr12,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9584272,1658,9_9584272_1658,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9604803,69175341,59570538,translocation,chr12,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9604803,1659,9_9604803_1659,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9643615,68589819,58946204,translocation,chr12,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9643615,1660,9_9643615_1660,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9684518,13767278,4082756,inversion,chr9,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9684518,1661,9_9684518_1661,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9758279,69629120,59870841,translocation,chr12,5UTRintron,3,43,PTPRD,ENST00000381196,True,9_9758279,1662,9_9758279_1662,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,9760955,70107243,60346288,translocation,chr12,5UTRintron,3,43,PTPRD,ENST00000381196,True,9_9760955,1663,9_9760955_1663,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,10191683,12320093,2128410,inversion,chr9,5UTRintron,3,17,PTPRD,ENST00000463477,True,9_10191683,1664,9_10191683_1664,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,12737734,12775044,37309,inversion,chr9,,-1,-1,,,True,9_12737734,1665,9_12737734_1665,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr9,12811899,17281278,4469379,deletion,chr9,intron,1,2,LURAP1L,ENST00000319264,True,9_12811899,1666,9_12811899_1666,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr11,47483293,61619708,14136415,deletion,chr11,intron,8,16,CELF1,ENST00000531165,True,11_47483293,1673,11_47483293_1673,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,31119558,31119955,397,deletion,chr12,intron,27,34,AC024940.1,ENST00000632817,True,12_31119558,1677,12_31119558_1677,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,60314546,69767068,9452522,tandem-duplication,chr12,,-1,-1,,,True,12_60314546,1678,12_60314546_1678,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,60315271,66170120,5854849,deletion,chr12,,-1,-1,,,True,12_60315271,1679,12_60315271_1679,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,61840166,68748369,6908203,tandem-duplication,chr12,intron,2,5,FAM19A2,ENST00000416284,True,12_61840166,1680,12_61840166_1680,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,66777218,68651130,1873912,tandem-duplication,chr12,5UTRintron,1,21,GRIP1,ENST00000540433,True,12_66777218,1681,12_66777218_1681,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,67892689,69295098,1402409,inversion,chr12,,-1,-1,,,True,12_67892689,1682,12_67892689_1682,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,68668204,69164266,496061,inversion,chr12,3UTRexon,8,8,RAP1B,ENST00000250559,True,12_68668204,1683,12_68668204_1683,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,68800673,68802772,2099,inversion,chr12,,-1,-1,,,True,12_68800673,1684,12_68800673_1684,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,68850013,68985461,135448,deletion,chr12,3UTRexon,11,11,MDM2,ENST00000258149,True,12_68850013,1685,12_68850013_1685,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,69080099,69081268,1169,inversion,chr12,,-1,-1,,,True,12_69080099,1686,12_69080099_1686,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,69573565,70540047,966482,deletion,chr12,intron,6,7,FRS2,ENST00000550389,True,12_69573565,1687,12_69573565_1687,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr12,69673872,69675133,1261,inversion,chr12,intron,7,10,BEST3,ENST00000331471,True,12_69673872,1688,12_69673872_1688,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr13,29482852,55079033,25596181,translocation,chr18,intron,10,16,MTUS2,ENST00000612955,True,13_29482852,1690,13_29482852_1690,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr13,31969720,32045952,76230,inversion,chr13,,-1,-1,,,True,13_31969720,1691,13_31969720_1691,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr13,32650987,33135064,484077,inversion,chr13,intron,2,35,PDS5B,ENST00000315596,True,13_32650987,1692,13_32650987_1692,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr13,37777693,55469815,17692122,translocation,chr18,intron,2,11,TRPC4,ENST00000379705,True,13_37777693,1693,13_37777693_1693,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr13,86485852,100557944,14072092,inversion,chr13,,-1,-1,,,True,13_86485852,1694,13_86485852_1694,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr17,315994,316901,907,deletion,chr17,intron,5,9,RPH3AL,ENST00000323434,True,17_315994,1700,17_315994_1700,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr17,1118569,1119447,878,deletion,chr17,intron,2,23,ABR,ENST00000302538,True,17_1118569,1701,17_1118569_1701,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr17,80744305,80744914,609,deletion,chr17,intron,5,34,RPTOR,ENST00000306801,True,17_80744305,1706,17_80744305_1706,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chr19,53470170,112944105,59473935,translocation,chrX,5UTRintron,1,4,ZNF813,ENST00000396403,True,19_53470170,1714,19_53470170_1714,
t6_PDAC_case16_S4,PDAC_case16_S4,case16_S4_PDAC,case16,case16_S4,PDAC,t6,chrX,50798803,50846729,47926,deletion,chrX,intron,1,9,SHROOM4,ENST00000376020,True,X_50798803,1726,X_50798803_1726,
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,23769969,34238223,10468254,translocation,chr17,,-1,-1,,,True,1_23769969,14,1_23769969_14,1_23769969_14
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,28831849,64138500,35306651,translocation,chr12,intron,1,3,OPRD1,ENST00000234961,True,1_28831849,16,1_28831849_16,1_28831849_16
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,84001620,185604429,101602808,inversion,chr1,,-1,-1,,,True,1_84001620,35,1_84001620_35,1_84001620_35
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,84177816,185593032,101415216,deletion,chr1,intron,1,10,PRKACB,ENST00000370689,True,1_84177816,36,1_84177816_36,1_84177816_36
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,101189630,44019514,-57170116,translocation,chr15,,-1,-1,,,True,1_101189630,37,1_101189630_37,1_101189630_37
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,113806320,46336774,-67469546,translocation,chr3,intron,1,7,RSBN1,ENST00000261441,True,1_113806320,41,1_113806320_41,1_113806320_41
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,152864925,66774442,-86090484,translocation,chr12,,-1,-1,,,True,1_152864925,49,1_152864925_49,1_152864925_49
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,167458583,81042460,-86416123,translocation,chrX,intron,1,8,CD247,ENST00000362089,True,1_167458583,59,1_167458583_59,1_167458583_59
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,184925371,185603790,678419,deletion,chr1,intron,1,14,FAM129A,ENST00000367511,True,1_184925371,64,1_184925371_64,1_184925371_64
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,190103893,69676420,-120427473,translocation,chr12,intron,7,8,BRINP3,ENST00000367462,True,1_190103893,65,1_190103893_65,1_190103893_65
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,209037583,97569011,-111468572,translocation,chr4,,-1,-1,,,True,1_209037583,76,1_209037583_76,1_209037583_76
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,213006362,29790702,-183215675,translocation,chr2,intron,4,9,ANGEL2,ENST00000366962,True,1_213006362,77,1_213006362_77,1_213006362_77
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,213116109,168939998,-44176113,translocation,chr4,5UTRintron,3,14,RPS6KC1,ENST00000543354,True,1_213116109,78,1_213116109_78,1_213116109_78
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,213209249,122857336,-90351913,translocation,chr7,5UTRintron,8,13,RPS6KC1,ENST00000615329,True,1_213209249,79,1_213209249_79,1_213209249_79
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,213336320,66953502,-146382820,translocation,chr7,,-1,-1,,,True,1_213336320,80,1_213336320_80,1_213336320_80
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,221381987,228349563,6967576,deletion,chr1,,-1,-1,,,True,1_221381987,82,1_221381987_82,1_221381987_82
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,240529219,4104284,-236424935,translocation,chr2,5UTRintron,1,2,GREM2,ENST00000318160,True,1_240529219,91,1_240529219_91,1_240529219_91
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,241996909,23255179,-218741730,translocation,chr7,intron,3,4,MAP1LC3C,ENST00000357246,True,1_241996909,92,1_241996909_92,1_241996909_92
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr1,248913717,77966770,-170946949,translocation,chr7,5UTRintron,1,3,PGBD2,ENST00000355360,True,1_248913717,98,1_248913717_98,1_248913717_98
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,20261422,42407177,22145755,inversion,chr2,intron,13,20,PUM2,ENST00000338086,True,2_20261422,110,2_20261422_110,2_20261422_110
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,39396096,173978497,134582401,inversion,chr2,intron,1,34,MAP4K3,ENST00000263881,True,2_39396096,1039,2_39396096_1039,2_39396096_1039
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,57756092,71906948,14150850,translocation,chr4,,-1,-1,,,True,2_57756092,1040,2_57756092_1040,2_57756092_1040
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,74228749,66057592,-8171157,translocation,chr12,intron,22,29,SLC4A5,ENST00000346834,True,2_74228749,1041,2_74228749_1041,2_74228749_1041
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,90324001,90325276,1275,deletion,chr2,,-1,-1,,,True,2_90324001,1049,2_90324001_1049,2_90324001_1049
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,106316534,35508198,-70808336,translocation,chr20,,-1,-1,,,True,2_106316534,1050,2_106316534_1050,2_106316534_1050
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,112188071,132469189,20281118,translocation,chr7,3UTRexon,8,8,FBLN7,ENST00000331203,True,2_112188071,1052,2_112188071_1052,2_112188071_1052
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,124451674,10703784,-113747897,translocation,chr7,intron,6,24,CNTNAP5,ENST00000431078,True,2_124451674,1053,2_124451674_1053,2_124451674_1053
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,155308788,156072968,764180,inversion,chr2,,-1,-1,,,True,2_155308788,1054,2_155308788_1054,2_155308788_1054
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,227393458,73054931,-154338527,translocation,chr18,,-1,-1,,,True,2_227393458,1056,2_227393458_1056,2_227393458_1056
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr2,229923797,110060404,-119863393,translocation,chr11,intron,1,4,FBXO36,ENST00000283946,True,2_229923797,1057,2_229923797_1057,2_229923797_1057
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr3,42023157,105035392,63012235,translocation,chr12,5UTRintron,1,17,TRAK1,ENST00000487159,True,3_42023157,1059,3_42023157_1059,3_42023157_1059
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr3,71220047,99002625,27782578,translocation,chr12,5UTRintron,5,21,FOXP1,ENST00000318789,True,3_71220047,1060,3_71220047_1060,3_71220047_1060
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr3,99266346,85921303,-13345043,translocation,chr8,,-1,-1,,,True,3_99266346,1063,3_99266346_1063,3_99266346_1063
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr3,178586524,120935693,-57650831,translocation,chr7,5UTRintron,1,5,AC117457.1,ENST00000614557,True,3_178586524,1067,3_178586524_1067,3_178586524_1067
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr3,188412120,82758678,-105653442,translocation,chr17,intron,3,11,LPP,ENST00000640853,True,3_188412120,1068,3_188412120_1068,3_188412120_1068
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,1707294,1631819,-75475,translocation,chr9,intron,2,8,SLBP,ENST00000489418,True,4_1707294,1070,4_1707294_1070,4_1707294_1070
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,2101930,60644618,58542688,translocation,chr8,intron,19,26,POLN,ENST00000511885,True,4_2101930,1071,4_2101930_1071,4_2101930_1071
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,26096210,60263376,34167166,translocation,chr16,UTRintron,2,3,LINC02357,ENST00000637313,True,4_26096210,1072,4_26096210_1072,4_26096210_1072
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,63259587,103085500,39825913,tandem-duplication,chr4,,-1,-1,,,True,4_63259587,1077,4_63259587_1077,4_63259587_1077
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,100042610,168931503,68888891,inversion,chr4,,-1,-1,,,True,4_100042610,1078,4_100042610_1078,4_100042610_1078
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,103086123,78944512,-24141611,translocation,chr7,intron,6,10,BDH2,ENST00000296424,True,4_103086123,1079,4_103086123_1079,4_103086123_1079
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,117081226,114502837,-2578389,translocation,chr6,,-1,-1,,,True,4_117081226,1080,4_117081226_1080,4_117081226_1080
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,118409900,119315708,905808,deletion,chr4,,-1,-1,,,True,4_118409900,1081,4_118409900_1081,4_118409900_1081
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,124408235,30276144,-94132091,translocation,chr5,,-1,-1,,,True,4_124408235,1082,4_124408235_1082,4_124408235_1082
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,152000988,124749329,-27251659,translocation,chr12,,-1,-1,,,True,4_152000988,1084,4_152000988_1084,4_152000988_1084
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr4,169108123,66687381,-102420742,translocation,chr7,intron,10,12,SH3RF1,ENST00000284637,True,4_169108123,1085,4_169108123_1085,4_169108123_1085
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr5,1272676,1273389,713,deletion,chr5,intron,6,16,TERT,ENST00000310581,True,5_1272676,1087,5_1272676_1087,5_1272676_1087
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr5,3238269,8627805,5389536,translocation,chr19,,-1,-1,,,True,5_3238269,1088,5_3238269_1088,5_3238269_1088
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr5,17854041,4432461,-13421580,translocation,chr9,UTRintron,2,5,LINC02223,ENST00000511596,True,5_17854041,1089,5_17854041_1089,5_17854041_1089
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr5,43369197,35050714,-8318483,translocation,chr7,,-1,-1,,,True,5_43369197,1090,5_43369197_1090,5_43369197_1090
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr5,84871635,66057591,-18814044,translocation,chr12,,-1,-1,,,True,5_84871635,1093,5_84871635_1093,5_84871635_1093
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr5,140184337,55360926,-84823411,translocation,chr6,5UTRintron,1,3,CYSTM1,ENST00000261811,True,5_140184337,1094,5_140184337_1094,5_140184337_1094
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr6,80974948,74360822,-6614126,translocation,chrX,,-1,-1,,,True,6_80974948,1096,6_80974948_1096,6_80974948_1096
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr6,101490934,113342595,11851661,translocation,chr13,intron,1,17,GRIK2,ENST00000369138,True,6_101490934,1097,6_101490934_1097,6_101490934_1097
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr6,156096551,84460284,-71636267,translocation,chr10,,-1,-1,,,True,6_156096551,1101,6_156096551_1101,6_156096551_1101
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr6,157311928,157314157,2229,deletion,chr6,intron,3,4,TMEM242,ENST00000400788,True,6_157311928,1102,6_157311928_1102,6_157311928_1102
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr6,170169862,170171647,1785,deletion,chr6,,-1,-1,,,True,6_170169862,1103,6_170169862_1103,6_170169862_1103
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,905687,906805,1118,deletion,chr7,intron,4,11,ADAP1,ENST00000539900,True,7_905687,1104,7_905687_1104,7_905687_1104
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,66566901,127336801,60769900,tandem-duplication,chr7,,-1,-1,,,True,7_66566901,1107,7_66566901_1107,7_66566901_1107
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,69174924,49400520,-19774404,translocation,chr12,,-1,-1,,,True,7_69174924,1108,7_69174924_1108,7_69174924_1108
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,71845583,127336236,55490653,deletion,chr7,intron,5,7,CALN1,ENST00000395275,True,7_71845583,1109,7_71845583_1109,7_71845583_1109
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,76285322,31361410,-44923912,translocation,chr20,intron,14,15,SRRM3,ENST00000611745,True,7_76285322,1110,7_76285322_1110,7_76285322_1110
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,88629593,1381004,-87248589,translocation,chr8,,-1,-1,,,True,7_88629593,1111,7_88629593_1111,7_88629593_1111
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,100146012,68106531,-32039481,translocation,chr17,,-1,-1,,,True,7_100146012,1112,7_100146012_1112,7_100146012_1112
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,121608664,40322595,-81286069,translocation,chr21,,-1,-1,,,True,7_121608664,1113,7_121608664_1113,7_121608664_1113
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr7,130895295,96678855,-34216440,translocation,chr8,UTRintron,2,5,LINC00513,ENST00000447430,True,7_130895295,1114,7_130895295_1114,7_130895295_1114
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr8,537589,108040984,107503395,translocation,chr13,intron,2,5,TDRP,ENST00000523656,True,8_537589,1116,8_537589_1116,8_537589_1116
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr8,3741198,34019821,30278623,inversion,chr8,intron,6,70,CSMD1,ENST00000635120,True,8_3741198,1117,8_3741198_1117,8_3741198_1117
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr8,85111320,50363946,-34747374,translocation,chr22,intron,3,19,LRRCC1,ENST00000360375,True,8_85111320,1119,8_85111320_1119,8_85111320_1119
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr8,97818676,50152844,-47665832,translocation,chr16,intron,4,7,LAPTM4B,ENST00000445593,True,8_97818676,1120,8_97818676_1120,8_97818676_1120
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr8,144781177,119547309,-25233868,translocation,chr10,5UTRintron,1,6,ZNF34,ENST00000343459,True,8_144781177,1121,8_144781177_1121,8_144781177_1121
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,227725,12702534,12474808,inversion,chr9,intron,1,48,DOCK8,ENST00000432829,True,9_227725,1122,9_227725_1122,9_227725_1122
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,351331,7092008,6740677,inversion,chr9,intron,14,48,DOCK8,ENST00000432829,True,9_351331,1123,9_351331_1123,9_351331_1123
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,422512,69123493,68700981,translocation,chr12,intron,33,48,DOCK8,ENST00000432829,True,9_422512,1124,9_422512_1124,9_422512_1124
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,532132,11641669,11109537,deletion,chr9,5UTRintron,3,16,KANK1,ENST00000382303,True,9_532132,1125,9_532132_1125,9_532132_1125
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,804601,66675515,65870914,translocation,chr12,,-1,-1,,,True,9_804601,1126,9_804601_1126,9_804601_1126
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1216165,1377838,161673,tandem-duplication,chr9,,-1,-1,,,True,9_1216165,1129,9_1216165_1129,9_1216165_1129
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1219513,68766461,67546948,translocation,chr12,,-1,-1,,,True,9_1219513,1127,9_1219513_1127,9_1219513_1127
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1231072,68599467,67368395,translocation,chr12,,-1,-1,,,True,9_1231072,1128,9_1231072_1128,9_1231072_1128
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1231902,67200084,65968182,translocation,chr12,,-1,-1,,,True,9_1231902,1130,9_1231902_1130,9_1231902_1130
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1232112,9602380,8370268,inversion,chr9,,-1,-1,,,True,9_1232112,1131,9_1232112_1131,9_1232112_1131
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1346396,9818165,8471769,tandem-duplication,chr9,,-1,-1,,,True,9_1346396,1132,9_1346396_1132,9_1346396_1132
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1367756,70535897,69168141,translocation,chr12,,-1,-1,,,True,9_1367756,1133,9_1367756_1133,9_1367756_1133
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1413664,69070898,67657234,translocation,chr12,,-1,-1,,,True,9_1413664,1134,9_1413664_1134,9_1413664_1134
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1449732,4400765,2951033,tandem-duplication,chr9,,-1,-1,,,True,9_1449732,1135,9_1449732_1135,9_1449732_1135
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1500550,69223937,67723387,translocation,chr12,,-1,-1,,,True,9_1500550,1136,9_1500550_1136,9_1500550_1136
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1568946,68599464,67030518,translocation,chr12,,-1,-1,,,True,9_1568946,1137,9_1568946_1137,9_1568946_1137
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1649737,2069374,419637,deletion,chr9,,-1,-1,,,True,9_1649737,1138,9_1649737_1138,9_1649737_1138
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1704401,7590803,5886402,inversion,chr9,,-1,-1,,,True,9_1704401,1139,9_1704401_1139,9_1704401_1139
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,1844884,12708257,10863372,inversion,chr9,,-1,-1,,,True,9_1844884,1140,9_1844884_1140,9_1844884_1140
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,2299115,69088694,66789579,translocation,chr12,,-1,-1,,,True,9_2299115,1142,9_2299115_1142,9_2299115_1142
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,2300341,5460721,3160380,deletion,chr9,,-1,-1,,,True,9_2300341,1141,9_2300341_1141,9_2300341_1141
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,2558597,6688594,4129997,inversion,chr9,,-1,-1,,,True,9_2558597,1143,9_2558597_1143,9_2558597_1143
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,2623696,6635793,4012097,inversion,chr9,intron,1,19,VLDLR,ENST00000382100,True,9_2623696,1144,9_2623696_1144,9_2623696_1144
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,2626265,11175420,8549155,inversion,chr9,intron,1,19,VLDLR,ENST00000382100,True,9_2626265,1145,9_2626265_1145,9_2626265_1145
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,2641568,68813411,66171843,translocation,chr12,intron,4,19,VLDLR,ENST00000382100,True,9_2641568,1146,9_2641568_1146,9_2641568_1146
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,3595043,13417259,9822215,inversion,chr9,UTRintron,3,6,RFX3-AS1,ENST00000423112,True,9_3595043,1147,9_3595043_1147,9_3595043_1147
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,3855418,70619611,66764193,translocation,chr12,intron,8,10,GLIS3,ENST00000324333,True,9_3855418,1148,9_3855418_1148,9_3855418_1148
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,3886208,67919526,64033318,translocation,chr12,intron,7,11,GLIS3,ENST00000381971,True,9_3886208,1150,9_3886208_1150,9_3886208_1150
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,3886538,7274198,3387660,deletion,chr9,intron,7,11,GLIS3,ENST00000381971,True,9_3886538,1149,9_3886538_1149,9_3886538_1149
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,3886864,7274456,3387592,inversion,chr9,intron,7,11,GLIS3,ENST00000381971,True,9_3886864,1151,9_3886864_1151,9_3886864_1151
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4167309,66776556,62609247,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4167309,1152,9_4167309_1152,9_4167309_1152
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4196447,70619497,66423050,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4196447,1153,9_4196447_1153,9_4196447_1153
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4197901,67880540,63682639,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4197901,1155,9_4197901_1155,9_4197901_1155
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4201414,4278010,76596,deletion,chr9,intron,2,11,GLIS3,ENST00000381971,True,9_4201414,1154,9_4201414_1154,9_4201414_1154
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4204504,9102140,4897636,inversion,chr9,intron,2,11,GLIS3,ENST00000381971,True,9_4204504,1156,9_4204504_1156,9_4204504_1156
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4274493,68599757,64325264,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4274493,1159,9_4274493_1159,9_4274493_1159
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4274646,68599161,64324515,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4274646,1157,9_4274646_1157,9_4274646_1157
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4279734,67252871,62973137,translocation,chr12,intron,2,11,GLIS3,ENST00000381971,True,9_4279734,1158,9_4279734_1158,9_4279734_1158
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4318481,67214274,62895793,translocation,chr12,,-1,-1,,,True,9_4318481,1160,9_4318481_1160,9_4318481_1160
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4423857,69077675,64653818,translocation,chr12,,-1,-1,,,True,9_4423857,1161,9_4423857_1161,9_4423857_1161
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,4525101,9344335,4819234,tandem-duplication,chr9,intron,1,12,SLC1A1,ENST00000262352,True,9_4525101,1162,9_4525101_1162,9_4525101_1162
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5144509,8278755,3134246,tandem-duplication,chr9,,-1,-1,,,True,9_5144509,1163,9_5144509_1163,9_5144509_1163
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5169393,66659438,61490045,translocation,chr12,intron,1,2,INSL6,ENST00000381641,True,9_5169393,1164,9_5169393_1164,9_5169393_1164
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5234931,7229900,1994969,inversion,chr9,3UTRexon,2,2,INSL4,ENST00000239316,True,9_5234931,1167,9_5234931_1167,9_5234931_1167
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5245829,62276071,57030242,translocation,chr12,,-1,-1,,,True,9_5245829,1165,9_5245829_1165,9_5245829_1165
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5246125,7023294,1777169,deletion,chr9,,-1,-1,,,True,9_5246125,1166,9_5246125_1166,9_5246125_1166
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5356448,69218705,63862257,translocation,chr12,,-1,-1,,,True,9_5356448,1168,9_5356448_1168,9_5356448_1168
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5409401,69153680,63744279,translocation,chr12,intron,3,6,PLGRKT,ENST00000223864,True,9_5409401,1169,9_5409401_1169,9_5409401_1169
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5510744,69551622,64040878,translocation,chr12,5UTRexon,1,7,PDCD1LG2,ENST00000397747,True,9_5510744,1170,9_5510744_1170,9_5510744_1170
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5626257,62303257,56677000,translocation,chr12,,-1,-1,,,True,9_5626257,1172,9_5626257_1172,9_5626257_1172
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5654754,7023706,1368952,inversion,chr9,intron,1,26,RIC1,ENST00000414202,True,9_5654754,1171,9_5654754_1171,9_5654754_1171
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,5937089,69405749,63468660,translocation,chr12,intron,5,8,KIAA2026,ENST00000399933,True,9_5937089,1173,9_5937089_1173,9_5937089_1173
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,6266925,68104683,61837758,translocation,chr12,,-1,-1,,,True,9_6266925,1174,9_6266925_1174,9_6266925_1174
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,6733416,11647903,4914487,inversion,chr9,intron,1,18,KDM4C,ENST00000536108,True,9_6733416,1175,9_6733416_1175,9_6733416_1175
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7002255,11647681,4645426,inversion,chr9,intron,12,18,KDM4C,ENST00000536108,True,9_7002255,1176,9_7002255_1176,9_7002255_1176
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7009568,70536286,63526718,translocation,chr12,intron,12,18,KDM4C,ENST00000536108,True,9_7009568,1177,9_7009568_1177,9_7009568_1177
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7230473,70586975,63356502,translocation,chr12,,-1,-1,,,True,9_7230473,1178,9_7230473_1178,9_7230473_1178
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7265830,62288442,55022612,translocation,chr12,,-1,-1,,,True,9_7265830,1179,9_7265830_1179,9_7265830_1179
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7368783,7370932,2147,inversion,chr9,,-1,-1,,,True,9_7368783,1180,9_7368783_1180,9_7368783_1180
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7403258,70558642,63155384,translocation,chr12,,-1,-1,,,True,9_7403258,1181,9_7403258_1181,9_7403258_1181
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7454000,69341278,61887278,translocation,chr12,,-1,-1,,,True,9_7454000,1184,9_7454000_1184,9_7454000_1184
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7462966,9270300,1807329,inversion,chr9,,-1,-1,,,True,9_7462966,1182,9_7462966_1182,9_7462966_1182
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7465991,17416864,9950873,tandem-duplication,chr9,,-1,-1,,,True,9_7465991,1183,9_7465991_1183,9_7465991_1183
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7503308,70678111,63174803,translocation,chr12,,-1,-1,,,True,9_7503308,1185,9_7503308_1185,9_7503308_1185
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7521709,12743752,5222043,tandem-duplication,chr9,,-1,-1,,,True,9_7521709,1186,9_7521709_1186,9_7521709_1186
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,7784354,69117396,61333042,translocation,chr12,,-1,-1,,,True,9_7784354,1187,9_7784354_1187,9_7784354_1187
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9071103,66827248,57756145,translocation,chr12,5UTRintron,7,43,PTPRD,ENST00000381196,True,9_9071103,1188,9_9071103_1188,9_9071103_1188
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9138020,66765815,57627795,translocation,chr12,5UTRintron,7,43,PTPRD,ENST00000381196,True,9_9138020,1189,9_9138020_1189,9_9138020_1189
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9158106,69565639,60407533,translocation,chr12,5UTRintron,7,43,PTPRD,ENST00000381196,True,9_9158106,1190,9_9158106_1190,9_9158106_1190
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9584272,68609522,59025250,translocation,chr12,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9584272,1191,9_9584272_1191,9_9584272_1191
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9604803,69175341,59570538,translocation,chr12,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9604803,1192,9_9604803_1192,9_9604803_1192
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9643615,68589819,58946204,translocation,chr12,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9643615,1193,9_9643615_1193,9_9643615_1193
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9684518,13767278,4082756,inversion,chr9,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9684518,1194,9_9684518_1194,9_9684518_1194
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9758249,57872166,48113917,translocation,chr12,5UTRintron,3,43,PTPRD,ENST00000381196,True,9_9758249,1195,9_9758249_1195,9_9758249_1195
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9758279,69629120,59870841,translocation,chr12,5UTRintron,3,43,PTPRD,ENST00000381196,True,9_9758279,1196,9_9758279_1196,9_9758279_1196
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,9760955,70107243,60346288,translocation,chr12,5UTRintron,3,43,PTPRD,ENST00000381196,True,9_9760955,1197,9_9760955_1197,9_9760955_1197
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,10191683,12320093,2128410,inversion,chr9,5UTRintron,3,17,PTPRD,ENST00000463477,True,9_10191683,1198,9_10191683_1198,9_10191683_1198
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,11826877,69168954,57342077,translocation,chr12,,-1,-1,,,True,9_11826877,1199,9_11826877_1199,9_11826877_1199
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,12705447,69193413,56487966,translocation,chr12,intron,6,8,TYRP1,ENST00000388918,True,9_12705447,1200,9_12705447_1200,9_12705447_1200
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,12737734,12775044,37309,inversion,chr9,,-1,-1,,,True,9_12737734,1202,9_12737734_1202,9_12737734_1202
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr9,12811899,17281278,4469379,deletion,chr9,intron,1,2,LURAP1L,ENST00000319264,True,9_12811899,1201,9_12811899_1201,9_12811899_1201
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr10,48250723,45348484,-2902239,translocation,chr18,intron,2,29,FRMPD2,ENST00000374201,True,10_48250723,1209,10_48250723_1209,10_48250723_1209
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr10,50406679,43830700,-6575979,translocation,chr15,5UTRintron,6,11,SGMS1,ENST00000361781,True,10_50406679,1210,10_50406679_1210,10_50406679_1210
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr10,132203948,28311404,-103892544,translocation,chr17,intron,13,14,DPYSL4,ENST00000338492,True,10_132203948,1211,10_132203948_1211,10_132203948_1211
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr11,36925700,21457530,-15468173,translocation,chr18,,-1,-1,,,True,11_36925700,1212,11_36925700_1212,11_36925700_1212
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr11,37177184,37993363,816179,tandem-duplication,chr11,,-1,-1,,,True,11_37177184,1213,11_37177184_1213,11_37177184_1213
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr11,71271411,49468161,-21803250,translocation,chr16,,-1,-1,,,True,11_71271411,1216,11_71271411_1216,11_71271411_1216
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,60314546,69767068,9452522,tandem-duplication,chr12,,-1,-1,,,True,12_60314546,1218,12_60314546_1218,12_60314546_1218
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,60315271,66170120,5854849,deletion,chr12,,-1,-1,,,True,12_60315271,1217,12_60315271_1217,12_60315271_1217
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,62218918,69794915,7575997,inversion,chr12,5UTRintron,1,6,FAM19A2,ENST00000551619,True,12_62218918,1219,12_62218918_1219,12_62218918_1219
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,62272555,62289098,16543,deletion,chr12,intron,1,21,USP15,ENST00000353364,True,12_62272555,1220,12_62272555_1220,12_62272555_1220
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,66665407,69277743,2612336,inversion,chr12,intron,1,24,GRIP1,ENST00000398016,True,12_66665407,1221,12_66665407_1221,12_66665407_1221
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,66777218,68651129,1873911,tandem-duplication,chr12,5UTRintron,1,21,GRIP1,ENST00000540433,True,12_66777218,1222,12_66777218_1222,12_66777218_1222
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,67200815,70604640,3403825,inversion,chr12,,-1,-1,,,True,12_67200815,1223,12_67200815_1223,12_67200815_1223
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,67892686,69295098,1402409,inversion,chr12,,-1,-1,,,True,12_67892686,1224,12_67892686_1224,12_67892686_1224
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,68668204,69164266,496061,inversion,chr12,3UTRexon,8,8,RAP1B,ENST00000250559,True,12_68668204,1225,12_68668204_1225,12_68668204_1225
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,68726819,69336069,609248,inversion,chr12,intron,19,28,NUP107,ENST00000229179,True,12_68726819,1226,12_68726819_1226,12_68726819_1226
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,68800669,68802772,2099,inversion,chr12,,-1,-1,,,True,12_68800669,1227,12_68800669_1227,12_68800669_1227
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,68850013,68985461,135448,deletion,chr12,3UTRexon,11,11,MDM2,ENST00000258149,True,12_68850013,1228,12_68850013_1228,12_68850013_1228
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,69080099,69081268,1169,inversion,chr12,,-1,-1,,,True,12_69080099,1229,12_69080099_1229,12_69080099_1229
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,69526729,69527141,412,inversion,chr12,5UTRintron,1,7,FRS2,ENST00000550389,True,12_69526729,1230,12_69526729_1230,12_69526729_1230
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,69573565,70540047,966482,deletion,chr12,intron,6,7,FRS2,ENST00000550389,True,12_69573565,1231,12_69573565_1231,12_69573565_1231
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,69673872,69675133,1261,inversion,chr12,intron,7,10,BEST3,ENST00000331471,True,12_69673872,1232,12_69673872_1232,12_69673872_1232
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,70685619,70758946,73327,inversion,chr12,intron,8,14,PTPRR,ENST00000283228,True,12_70685619,1233,12_70685619_1233,12_70685619_1233
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr12,70791982,70793082,1100,inversion,chr12,intron,2,14,PTPRR,ENST00000283228,True,12_70791982,1234,12_70791982_1234,12_70791982_1234
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr13,26965177,30077069,3111892,tandem-duplication,chr13,,-1,-1,,,True,13_26965177,1235,13_26965177_1235,13_26965177_1235
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr13,29614488,53695673,24081181,translocation,chr18,,-1,-1,,,True,13_29614488,1236,13_29614488_1236,13_29614488_1236
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr13,29822844,29988095,165251,deletion,chr13,intron,1,5,UBL3,ENST00000380680,True,13_29822844,1237,13_29822844_1237,13_29822844_1237
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr13,95214805,4614090,-90600715,translocation,chr19,intron,4,31,ABCC4,ENST00000376887,True,13_95214805,1238,13_95214805_1238,13_95214805_1238
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr14,70793204,80938373,10145169,inversion,chr14,intron,2,12,MAP3K9,ENST00000554752,True,14_70793204,1239,14_70793204_1239,14_70793204_1239
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr14,103229649,70168219,-33061430,translocation,chr18,,-1,-1,,,True,14_103229649,1240,14_103229649_1240,14_103229649_1240
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr15,69592667,44267616,-25325051,translocation,chr20,UTRintron,1,2,PCAT29,ENST00000558411,True,15_69592667,1242,15_69592667_1242,15_69592667_1242
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr15,72197119,42372194,-29824925,translocation,chr19,intron,1,12,GRAMD2A,ENST00000309731,True,15_72197119,1243,15_72197119_1243,15_72197119_1243
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr15,99730728,25670089,-74060639,translocation,chrX,5UTRintron,4,5,LYSMD4,ENST00000332728,True,15_99730728,1244,15_99730728_1244,15_99730728_1244
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr18,9424914,9548163,123248,inversion,chr18,,-1,-1,,,True,18_9424914,1253,18_9424914_1253,18_9424914_1253
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chr19,350270,351077,807,deletion,chr19,,-1,-1,,,True,19_350270,1254,19_350270_1254,19_350270_1254
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,18539809,242951676,224411867,tandem-duplication,1,,-1,-1,,,True,1_18539809,28,1_18539809_28,1_18539809_28
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,23899820,50192587,26292767,translocation,6,5UTRintron,1,2,CNR2,ENST00000374472,True,1_23899820,34,1_23899820_34,1_23899820_34
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,53956832,32989182,-20967650,translocation,14,intron,3,9,LRRC42,ENST00000371370,True,1_53956832,58,1_53956832_58,1_53956832_58
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,53956875,32989186,-20967689,translocation,14,intron,3,9,LRRC42,ENST00000371370,True,1_53956875,59,1_53956875_59,1_53956875_59
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,144104711,16566943,-127537768,translocation,22,,-1,-1,,,True,1_144104711,116,1_144104711_116,1_144104711_116
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,169668502,128047636,-41620866,translocation,4,,-1,-1,,,True,1_169668502,138,1_169668502_138,1_169668502_138
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr1,242951670,100976093,-141975577,translocation,8,,-1,-1,,,True,1_242951670,192,1_242951670_192,1_242951670_192
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr2,39030316,78134008,39103692,translocation,4,intron,9,24,SOS1,ENST00000426016,True,2_39030316,1770,2_39030316_1770,2_39030316_1770
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr2,234532616,86327219,-148205397,translocation,7,,-1,-1,,,True,2_234532616,1790,2_234532616_1790,2_234532616_1790
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr3,90536841,90538273,1432,deletion,3,,-1,-1,,,True,3_90536841,1798,3_90536841_1798,3_90536841_1798
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr3,90668398,90670440,2042,deletion,3,,-1,-1,,,True,3_90668398,1805,3_90668398_1805,3_90668398_1805
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr4,158141951,146180181,-11961770,translocation,6,intron,3,5,FAM198B,ENST00000296530,True,4_158141951,1842,4_158141951_1842,4_158141951_1842
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr5,37649840,79766962,42117122,translocation,6,intron,10,18,WDR70,ENST00000265107,True,5_37649840,1846,5_37649840_1846,5_37649840_1846
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr8,57204287,57210559,6272,deletion,8,UTRintron,3,4,LINC01606,ENST00000519241,True,8_57204287,1871,8_57204287_1871,8_57204287_1871
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr10,2784269,66057592,63273323,translocation,12,,-1,-1,,,True,10_2784269,1882,10_2784269_1882,10_2784269_1882
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr11,77583925,104509011,26925086,translocation,13,,-1,-1,,,True,11_77583925,1890,11_77583925_1890,11_77583925_1890
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr12,56369552,66057591,9688039,deletion,12,,-1,-1,,,True,12_56369552,1896,12_56369552_1896,12_56369552_1896
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr12,66057591,79085499,13027908,translocation,2,,-1,-1,,,True,12_66057591,1771,12_66057591_1771,12_66057591_1771
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr12,66057591,95138343,29080752,translocation,8,,-1,-1,,,True,12_66057591,1872,12_66057591_1872,12_66057591_1872
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr12,66057592,49637844,-16419748,translocation,4,,-1,-1,,,True,12_66057592,1834,12_66057592_1834,12_66057592_1834
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr12,66057592,76699212,10641620,translocation,9,,-1,-1,,,True,12_66057592,1880,12_66057592_1880,12_66057592_1880
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr13,78659312,160020063,81360751,translocation,3,,-1,-1,,,True,13_78659312,1812,13_78659312_1812,13_78659312_1812
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr14,85465952,43455653,-42010299,translocation,20,UTRintron,1,5,AL049775.2,ENST00000557547,True,14_85465952,1908,14_85465952_1908,14_85465952_1908
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr15,77618533,46748194,-30870339,translocation,19,5UTRintron,3,4,LINGO1,ENST00000561030,True,15_77618533,1914,15_77618533_1914,15_77618533_1914
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr19,35235326,107770154,72534828,translocation,7,,-1,-1,,,True,19_35235326,1865,19_35235326_1865,19_35235326_1865
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr21,10663976,10664823,847,deletion,21,,-1,-1,,,True,21_10663976,1950,21_10663976_1950,21_10663976_1950
t2_IPMN_LGD_case2_S10,IPMN_LGD_case2_S10,case2_S10_IPMN_LGD,case2,case2_S10,IPMN_LGD,t2,chr22,25820045,185827690,160007645,translocation,4,intron,12,44,MYO18B,ENST00000335473,True,22_25820045,1843,22_25820045_1843,22_25820045_1843
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr1,18539809,242951682,224411873,tandem-duplication,1,,-1,-1,,,True,1_18539809,21,1_18539809_21,1_18539809_21
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr1,32746230,403761,-32342469,translocation,12,intron,1,7,KIAA1522,ENST00000401073,True,1_32746230,30,1_32746230_30,1_32746230_30
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr1,71799845,72134265,334420,deletion,1,intron,2,7,NEGR1,ENST00000357731,True,1_71799845,50,1_71799845_50,1_71799845_50
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr1,92501116,92507042,5926,inversion,1,,-1,-1,,,True,1_92501116,62,1_92501116_62,1_92501116_62
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr1,92502156,94531641,2029485,inversion,1,,-1,-1,,,True,1_92502156,61,1_92502156_61,1_92502156_61
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr1,228236937,66057592,-162179345,translocation,12,intron,10,116,OBSCN,ENST00000570156,True,1_228236937,128,1_228236937_128,1_228236937_128
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,74026697,74170916,144219,deletion,2,intron,2,11,TET3,ENST00000409262,True,2_74026697,1306,2_74026697_1306,2_74026697_1306
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,74593913,74839901,245988,tandem-duplication,2,intron,4,11,M1AP,ENST00000290536,True,2_74593913,1307,2_74593913_1307,2_74593913_1307
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,87907462,129188147,41280685,translocation,8,,-1,-1,,,True,2_87907462,1308,2_87907462_1308,2_87907462_1308
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,87907462,45122483,-42784979,translocation,5,,-1,-1,,,True,2_87907462,1309,2_87907462_1309,2_87907462_1309
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,87907462,164334725,76427263,translocation,6,,-1,-1,,,True,2_87907462,1310,2_87907462_1310,2_87907462_1310
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,185495947,29877651,-155618296,translocation,9,,-1,-1,,,True,2_185495947,1319,2_185495947_1319,2_185495947_1319
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,194789434,195026159,236725,tandem-duplication,2,,-1,-1,,,True,2_194789434,1320,2_194789434_1320,2_194789434_1320
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,195303194,195305174,1980,deletion,2,,-1,-1,,,True,2_195303194,1321,2_195303194_1321,2_195303194_1321
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,227115126,227118858,3732,deletion,2,intron,7,48,COL4A4,ENST00000396625,True,2_227115126,1324,2_227115126_1324,2_227115126_1324
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr2,237639996,237643377,3381,deletion,2,intron,1,24,LRRFIP1,ENST00000308482,True,2_237639996,1325,2_237639996_1325,2_237639996_1325
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr3,76822601,76903826,81225,deletion,3,intron,2,27,ROBO2,ENST00000487694,True,3_76822601,1329,3_76822601_1329,3_76822601_1329
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr3,91424588,13191204,-78233384,translocation,6,,-1,-1,,,True,3_91424588,1345,3_91424588_1345,3_91424588_1345
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr3,119494033,29290840,-90203193,translocation,4,3UTRexon,11,11,POGLUT1,ENST00000295588,True,3_119494033,1348,3_119494033_1348,3_119494033_1348
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr3,175489020,175492433,3413,tandem-duplication,3,intron,9,14,NAALADL2,ENST00000454872,True,3_175489020,1352,3_175489020_1352,3_175489020_1352
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,29060838,29290366,229528,deletion,4,,-1,-1,,,True,4_29060838,1354,4_29060838_1354,4_29060838_1354
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,29917124,29918191,1067,inversion,4,,-1,-1,,,True,4_29917124,1355,4_29917124_1355,4_29917124_1355
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,33732166,33747973,15807,inversion,4,,-1,-1,,,True,4_33732166,1356,4_33732166_1356,4_33732166_1356
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,33751028,47514326,13763298,tandem-duplication,4,,-1,-1,,,True,4_33751028,1357,4_33751028_1357,4_33751028_1357
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,136292708,154854648,18561940,tandem-duplication,4,UTRintron,1,3,AC018680.1,ENST00000500324,True,4_136292708,1371,4_136292708_1371,4_136292708_1371
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,136293031,154854642,18561611,deletion,4,UTRintron,1,3,AC018680.1,ENST00000500324,True,4_136293031,1370,4_136293031_1370,4_136293031_1370
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,158142185,146180193,-11961992,translocation,6,intron,3,5,FAM198B,ENST00000296530,True,4_158142185,1372,4_158142185_1372,4_158142185_1372
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,167933594,148403079,-19530515,translocation,7,,-1,-1,,,True,4_167933594,1373,4_167933594_1373,4_167933594_1373
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr4,180406084,180489653,83569,tandem-duplication,4,,-1,-1,,,True,4_180406084,1374,4_180406084_1374,4_180406084_1374
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr5,57740951,59045838,1304887,inversion,5,,-1,-1,,,True,5_57740951,1380,5_57740951_1380,5_57740951_1380
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr5,57740951,59045838,1304887,inversion,5,,-1,-1,,,True,5_57740951,1381,5_57740951_1381,5_57740951_1381
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr5,82396493,159051106,76654613,deletion,5,,-1,-1,,,True,5_82396493,1383,5_82396493_1383,5_82396493_1383
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr5,108095072,108311592,216520,deletion,5,intron,6,9,FBXL17,ENST00000542267,True,5_108095072,1384,5_108095072_1384,5_108095072_1384
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr6,32504459,53956560,21452101,translocation,7,,-1,-1,,,True,6_32504459,1389,6_32504459_1389,6_32504459_1389
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr7,2311939,2319906,7967,tandem-duplication,7,intron,1,11,SNX8,ENST00000222990,True,7_2311939,1405,7_2311939_1405,7_2311939_1405
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr7,25864981,26588660,723679,inversion,7,,-1,-1,,,True,7_25864981,1407,7_25864981_1407,7_25864981_1407
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr7,26588661,26786817,198156,inversion,7,,-1,-1,,,True,7_26588661,1408,7_26588661_1408,7_26588661_1408
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr7,90281137,90407485,126348,tandem-duplication,7,intron,12,23,CFAP69,ENST00000389297,True,7_90281137,1409,7_90281137_1409,7_90281137_1409
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr7,90307366,90387416,80050,tandem-duplication,7,intron,20,23,CFAP69,ENST00000389297,True,7_90307366,1410,7_90307366_1410,7_90307366_1410
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr8,674899,676088,1189,deletion,8,intron,3,6,ERICH1,ENST00000262109,True,8_674899,1416,8_674899_1416,8_674899_1416
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr8,10243775,39519134,29275359,translocation,9,intron,2,6,MSRA,ENST00000317173,True,8_10243775,1417,8_10243775_1417,8_10243775_1417
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,9663336,10752971,1089635,tandem-duplication,9,5UTRintron,4,43,PTPRD,ENST00000381196,True,9_9663336,1424,9_9663336_1424,9_9663336_1424
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,10082604,10649659,567055,deletion,9,5UTRintron,3,17,PTPRD,ENST00000463477,True,9_10082604,1425,9_10082604_1425,9_10082604_1425
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,98818318,99860137,1041819,inversion,9,intron,1,10,GALNT12,ENST00000375011,True,9_98818318,1431,9_98818318_1431,9_98818318_1431
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,99857375,99901233,43858,inversion,9,intron,8,9,NR4A3,ENST00000618101,True,9_99857375,1433,9_99857375_1433,9_99857375_1433
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,100952248,123121727,22169479,inversion,9,,-1,-1,,,True,9_100952248,1434,9_100952248_1434,9_100952248_1434
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,100954392,122164315,21209923,inversion,9,,-1,-1,,,True,9_100954392,1435,9_100954392_1435,9_100954392_1435
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,102014955,122159710,20144755,inversion,9,,-1,-1,,,True,9_102014955,1436,9_102014955_1436,9_102014955_1436
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,102807126,103654850,847724,inversion,9,,-1,-1,,,True,9_102807126,1437,9_102807126_1437,9_102807126_1437
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,103067690,131429474,28361784,deletion,9,,-1,-1,,,True,9_103067690,1438,9_103067690_1438,9_103067690_1438
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,103652342,103655108,2766,inversion,9,,-1,-1,,,True,9_103652342,1439,9_103652342_1439,9_103652342_1439
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,106757043,107474435,717392,tandem-duplication,9,,-1,-1,,,True,9_106757043,1443,9_106757043_1443,9_106757043_1443
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,106757774,124771603,18013829,deletion,9,,-1,-1,,,True,9_106757774,1442,9_106757774_1442,9_106757774_1442
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,106762128,109811731,3049603,tandem-duplication,9,,-1,-1,,,True,9_106762128,1444,9_106762128_1444,9_106762128_1444
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,107475712,110882266,3406554,inversion,9,,-1,-1,,,True,9_107475712,1445,9_107475712_1445,9_107475712_1445
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,112889288,119378198,6488910,inversion,9,intron,1,4,SLC46A2,ENST00000374228,True,9_112889288,1447,9_112889288_1447,9_112889288_1447
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,112896622,133371378,20474756,deletion,9,,-1,-1,,,True,9_112896622,1448,9_112896622_1448,9_112896622_1448
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,112896817,131427379,18530562,tandem-duplication,9,,-1,-1,,,True,9_112896817,1449,9_112896817_1449,9_112896817_1449
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,119380742,131679556,12298814,tandem-duplication,9,,-1,-1,,,True,9_119380742,1450,9_119380742_1450,9_119380742_1450
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,124770106,126017465,1247359,inversion,9,intron,1,10,NR6A1,ENST00000487099,True,9_124770106,1451,9_124770106_1451,9_124770106_1451
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,133112603,135489730,2377127,inversion,9,intron,1,18,RALGDS,ENST00000372050,True,9_133112603,1454,9_133112603_1454,9_133112603_1454
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,133115352,136522529,3407177,inversion,9,intron,1,18,RALGDS,ENST00000393160,True,9_133115352,1455,9_133115352_1455,9_133115352_1455
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr9,133368900,137879551,4510651,inversion,9,intron,1,6,SURF4,ENST00000485435,True,9_133368900,1456,9_133368900_1456,9_133368900_1456
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr10,10083256,46848871,36765615,translocation,19,,-1,-1,,,True,10_10083256,1457,10_10083256_1457,10_10083256_1457
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr10,42313748,21978417,-20335331,translocation,20,,-1,-1,,,True,10_42313748,1458,10_42313748_1458,10_42313748_1458
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr11,14677822,14679708,1886,inversion,11,intron,1,16,PDE3B,ENST00000282096,True,11_14677822,1462,11_14677822_1462,11_14677822_1462
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr11,14677833,14679447,1614,inversion,11,intron,1,16,PDE3B,ENST00000282096,True,11_14677833,1463,11_14677833_1463,11_14677833_1463
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr11,77583925,104509008,26925083,translocation,13,,-1,-1,,,True,11_77583925,1465,11_77583925_1465,11_77583925_1465
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr11,99185510,99557051,371541,deletion,11,5UTRintron,1,25,CNTN5,ENST00000524871,True,11_99185510,1467,11_99185510_1467,11_99185510_1467
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr11,114747460,125031183,10283723,translocation,12,,-1,-1,,,True,11_114747460,1468,11_114747460_1468,11_114747460_1468
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr11,114747519,125030926,10283407,translocation,12,,-1,-1,,,True,11_114747519,1469,11_114747519_1469,11_114747519_1469
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,3064776,3862783,798007,inversion,12,,-1,-1,,,True,12_3064776,1470,12_3064776_1470,12_3064776_1470
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,3064776,3862783,798007,inversion,12,,-1,-1,,,True,12_3064776,1471,12_3064776_1471,12_3064776_1471
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057591,50373691,-15683900,translocation,2,,-1,-1,,,True,12_66057591,1304,12_66057591_1304,12_66057591_1304
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057591,133380781,67323190,translocation,2,,-1,-1,,,True,12_66057591,1316,12_66057591_1316,12_66057591_1316
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057591,57945602,-8111989,translocation,4,,-1,-1,,,True,12_66057591,1367,12_66057591_1367,12_66057591_1367
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057591,99629085,33571494,translocation,9,,-1,-1,,,True,12_66057591,1432,12_66057591_1432,12_66057591_1432
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057591,34086272,-31971319,translocation,20,,-1,-1,,,True,12_66057591,1479,12_66057591_1479,12_66057591_1479
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,108447169,42389577,translocation,3,,-1,-1,,,True,12_66057592,1346,12_66057592_1346,12_66057592_1346
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,129607291,63549699,translocation,4,,-1,-1,,,True,12_66057592,1369,12_66057592_1369,12_66057592_1369
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,2161668,-63895924,translocation,5,,-1,-1,,,True,12_66057592,1377,12_66057592_1377,12_66057592_1377
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,114480605,48423013,translocation,5,,-1,-1,,,True,12_66057592,1385,12_66057592_1385,12_66057592_1385
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,113404564,47346972,translocation,6,,-1,-1,,,True,12_66057592,1403,12_66057592_1403,12_66057592_1403
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,15097287,-50960305,translocation,7,,-1,-1,,,True,12_66057592,1406,12_66057592_1406,12_66057592_1406
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,70483892,4426300,translocation,18,,-1,-1,,,True,12_66057592,1475,12_66057592_1475,12_66057592_1475
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,21161085,-44896507,translocation,14,,-1,-1,,,True,12_66057592,1476,12_66057592_1476,12_66057592_1476
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,38065368,-27992224,translocation,20,,-1,-1,,,True,12_66057592,1480,12_66057592_1480,12_66057592_1480
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,66057592,61986627,-4070965,translocation,15,,-1,-1,,,True,12_66057592,1483,12_66057592_1483,12_66057592_1483
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr12,85566976,88694460,3127484,inversion,12,,-1,-1,,,True,12_85566976,1487,12_85566976_1487,12_85566976_1487
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr14,90445470,24419659,-66025811,translocation,19,,-1,-1,,,True,14_90445470,1493,14_90445470_1493,14_90445470_1493
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr14,90445693,83273246,-7172447,translocation,9,,-1,-1,,,True,14_90445693,1430,14_90445693_1430,14_90445693_1430
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr14,97135726,142935427,45799701,translocation,8,,-1,-1,,,True,14_97135726,1423,14_97135726_1423,14_97135726_1423
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr15,22800791,32572145,9771354,translocation,6,5UTRintron,1,5,NIPA1,ENST00000437912,True,15_22800791,1391,15_22800791_1391,15_22800791_1391
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr15,44784718,142420160,97635442,translocation,7,,-1,-1,,,True,15_44784718,1413,15_44784718_1413,15_44784718_1413
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr15,77618527,125015638,47397111,translocation,9,intron,1,2,LINGO1,ENST00000355300,True,15_77618527,1453,15_77618527_1453,15_77618527_1453
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr16,5438055,6020129,582074,deletion,16,intron,1,20,RBFOX1,ENST00000641259,True,16_5438055,1496,16_5438055_1496,16_5438055_1496
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr16,5531927,6186330,654403,deletion,16,intron,2,20,RBFOX1,ENST00000641259,True,16_5531927,1497,16_5531927_1497,16_5531927_1497
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr16,6430494,6504767,74273,deletion,16,5UTRintron,2,16,RBFOX1,ENST00000550418,True,16_6430494,1498,16_6430494_1498,16_6430494_1498
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr16,78060413,78355991,295578,tandem-duplication,16,,-1,-1,,,True,16_78060413,1503,16_78060413_1503,16_78060413_1503
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr16,78723609,78900463,176854,tandem-duplication,16,intron,8,9,WWOX,ENST00000566780,True,16_78723609,1504,16_78723609_1504,16_78723609_1504
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr16,78912158,79388135,475977,tandem-duplication,16,intron,8,9,WWOX,ENST00000566780,True,16_78912158,1505,16_78912158_1505,16_78912158_1505
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr17,3497658,44546241,41048583,translocation,19,5UTRintron,1,9,SPATA22,ENST00000541913,True,17_3497658,1506,17_3497658_1506,17_3497658_1506
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,8125975,78310683,70184708,deletion,18,intron,13,33,PTPRM,ENST00000580170,True,18_8125975,1510,18_8125975_1510,18_8125975_1510
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,8126037,78310945,70184908,tandem-duplication,18,intron,13,33,PTPRM,ENST00000580170,True,18_8126037,1511,18_8126037_1511,18_8126037_1511
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,8126055,81656748,73530693,translocation,8,intron,13,33,PTPRM,ENST00000580170,True,18_8126055,1420,18_8126055_1420,18_8126055_1420
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,35239148,35243130,3982,inversion,18,,-1,-1,,,True,18_35239148,1513,18_35239148_1513,18_35239148_1513
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,36780893,36786248,5355,inversion,18,intron,6,7,TPGS2,ENST00000614939,True,18_36780893,1514,18_36780893_1514,18_36780893_1514
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,38088566,29391750,-8696816,translocation,2,,-1,-1,,,True,18_38088566,149,18_38088566_149,18_38088566_149
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,38088566,38089754,1188,inversion,18,,-1,-1,,,True,18_38088566,1515,18_38088566_1515,18_38088566_1515
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,38089687,29391601,-8698086,translocation,2,,-1,-1,,,True,18_38089687,151,18_38089687_151,18_38089687_151
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,43501791,87907462,44405671,translocation,2,,-1,-1,,,True,18_43501791,1311,18_43501791_1311,18_43501791_1311
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr18,78310945,81656949,3346004,translocation,8,,-1,-1,,,True,18_78310945,1421,18_78310945_1421,18_78310945_1421
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr20,21901300,21902605,1305,inversion,20,,-1,-1,,,True,20_21901300,1517,20_21901300_1517,20_21901300_1517
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr20,22639997,22714150,74153,inversion,20,,-1,-1,,,True,20_22639997,1518,20_22639997_1518,20_22639997_1518
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr20,22797480,22798262,782,inversion,20,,-1,-1,,,True,20_22797480,1519,20_22797480_1519,20_22797480_1519
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr21,25784166,63580755,37796589,translocation,6,,-1,-1,,,True,21_25784166,1400,21_25784166_1400,21_25784166_1400
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr21,25784176,63581459,37797283,translocation,6,,-1,-1,,,True,21_25784176,1399,21_25784176_1399,21_25784176_1399
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr22,12693682,190177070,177483388,translocation,4,,-1,-1,,,True,22_12693682,1376,22_12693682_1376,22_12693682_1376
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr22,23993418,26100820,2107402,translocation,6,,-1,-1,,,True,22_23993418,1387,22_23993418_1387,22_23993418_1387
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr22,28669860,104148891,75479031,translocation,9,intron,1,23,TTC28,ENST00000397906,True,22_28669860,1441,22_28669860_1441,22_28669860_1441
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr22,28670132,104148891,75478759,translocation,9,intron,1,23,TTC28,ENST00000397906,True,22_28670132,1440,22_28670132_1440,22_28670132_1440
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chr22,38526496,38529238,2742,deletion,22,intron,12,14,DMC1,ENST00000216024,True,22_38526496,1528,22_38526496_1528,22_38526496_1528
t3_IPMN_HGD_case2_S2,IPMN_HGD_case2_S2,case2_S2_IPMN_HGD,case2,case2_S2,IPMN_HGD,t3,chrX,58189712,58217648,27936,deletion,X,,-1,-1,,,True,X_58189712,1530,X_58189712_1530,X_58189712_1530
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr1,92501071,92507042,5971,inversion,1,,-1,-1,,,True,1_92501071,19,1_92501071_19,1_92501071_19
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr7,9199036,9201066,2030,deletion,7,,-1,-1,,,True,7_9199036,509,7_9199036_509,7_9199036_509
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr12,49806330,50423616,617286,tandem-duplication,12,5UTRintron,1,13,NCKAP5L,ENST00000335999,True,12_49806330,518,12_49806330_518,12_49806330_518
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr12,66057591,95653682,29596091,translocation,6,,-1,-1,,,True,12_66057591,508,12_66057591_508,12_66057591_508
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr12,66057592,16775985,-49281607,translocation,17,,-1,-1,,,True,12_66057592,519,12_66057592_519,12_66057592_519
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr16,6021636,6128919,107283,deletion,16,5UTRintron,1,16,RBFOX1,ENST00000550418,True,16_6021636,521,16_6021636_521,16_6021636_521
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chr22,28670132,104148891,75478759,translocation,9,intron,1,23,TTC28,ENST00000397906,True,22_28670132,517,22_28670132_517,22_28670132_517
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chrX,1127434,1128484,1050,deletion,X,,-1,-1,,,True,X_1127434,523,X_1127434_523,X_1127434_523
t3_IPMN_HGD_case2_S4,IPMN_HGD_case2_S4,case2_S4_IPMN_HGD,case2,case2_S4,IPMN_HGD,t3,chrX,58189713,58217648,27935,deletion,X,,-1,-1,,,True,X_58189713,524,X_58189713_524,X_58189713_524
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr1,27456318,80577611,53121293,translocation,10,5UTRintron,1,9,WASF2,ENST00000618852,True,1_27456318,21,1_27456318_21,1_27456318_21
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr1,29074911,54575005,25500094,translocation,17,intron,16,21,EPB41,ENST00000343067,True,1_29074911,23,1_29074911_23,1_29074911_23
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr1,41446513,9021301,-32425212,translocation,19,,-1,-1,,,True,1_41446513,37,1_41446513_37,1_41446513_37
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr1,144077022,144883041,806019,inversion,1,,-1,-1,,,True,1_144077022,71,1_144077022_71,1_144077022_71
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr1,152841086,184571011,31729925,deletion,1,,-1,-1,,,True,1_152841086,75,1_152841086_75,1_152841086_75
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr2,181382279,16429452,-164952827,translocation,6,UTRintron,4,5,LINC01934,ENST00000435411,True,2_181382279,1232,2_181382279_1232,2_181382279_1232
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr2,218613362,147084571,-71528791,translocation,6,5UTRintron,1,16,PLCD4,ENST00000450993,True,2_218613362,1233,2_218613362_1233,2_218613362_1233
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr3,105046496,57606310,-47440186,translocation,7,,-1,-1,,,True,3_105046496,1239,3_105046496_1239,3_105046496_1239
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr4,28894062,140812929,111918867,translocation,6,,-1,-1,,,True,4_28894062,1245,4_28894062_1245,4_28894062_1245
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr5,176262625,158225267,-18037358,translocation,6,5UTRintron,2,12,SIMC1,ENST00000443967,True,5_176262625,1260,5_176262625_1260,5_176262625_1260
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr5,177978985,177980094,1109,deletion,5,UTRintron,1,2,AC106795.3,ENST00000511650,True,5_177978985,1261,5_177978985_1261,5_177978985_1261
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr6,62865410,64174978,1309568,inversion,6,,-1,-1,,,True,6_62865410,1267,6_62865410_1267,6_62865410_1267
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr7,142162765,142166726,3961,tandem-duplication,7,intron,23,48,MGAM2,ENST00000477922,True,7_142162765,1275,7_142162765_1275,7_142162765_1275
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr7,154661078,154661563,485,deletion,7,intron,6,26,DPP6,ENST00000404039,True,7_154661078,1281,7_154661078_1281,7_154661078_1281
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr9,21265639,23914936,2649297,deletion,9,,-1,-1,,,True,9_21265639,1291,9_21265639_1291,9_21265639_1291
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr10,25890463,41574502,15684039,translocation,8,,-1,-1,,,True,10_25890463,1285,10_25890463_1285,10_25890463_1285
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr10,100814351,32347057,-68467294,translocation,17,intron,7,11,PAX2,ENST00000370296,True,10_100814351,1297,10_100814351_1297,10_100814351_1297
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr10,124974939,42882497,-82092442,translocation,6,intron,5,9,ZRANB1,ENST00000359653,True,10_124974939,1265,10_124974939_1265,10_124974939_1265
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr12,31119773,31120962,1189,deletion,12,intron,27,34,AC024940.1,ENST00000632817,True,12_31119773,1307,12_31119773_1307,12_31119773_1307
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr12,55714255,147132797,91418542,translocation,4,,-1,-1,,,True,12_55714255,1255,12_55714255_1255,12_55714255_1255
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr12,129087959,129089546,1587,deletion,12,intron,5,9,TMEM132D,ENST00000422113,True,12_129087959,1310,12_129087959_1310,12_129087959_1310
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr13,20615714,140873739,120258025,translocation,6,intron,15,28,IFT88,ENST00000319980,True,13_20615714,1269,13_20615714_1269,13_20615714_1269
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr17,61714818,65452188,3737370,translocation,2,intron,17,20,BRIP1,ENST00000259008,True,17_61714818,1221,17_61714818_1221,17_61714818_1221
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr18,51073863,51097151,23288,deletion,18,intron,10,12,SMAD4,ENST00000342988,True,18_51073863,1335,18_51073863_1335,18_51073863_1335
t2_IPMN_LGD_case3_S1,IPMN_LGD_case3_S1,case3_S1_IPMN_LGD,case3,case3_S1,IPMN_LGD,t2,chr20,33468070,5385278,-28082792,translocation,9,,-1,-1,,,True,20_33468070,1289,20_33468070_1289,20_33468070_1289
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr1,17942182,150582687,132640505,translocation,6,,-1,-1,,,True,1_17942182,48,1_17942182_48,1_17942182_48
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr1,39159987,87462135,48302148,translocation,16,intron,1,93,MACF1,ENST00000361689,True,1_39159987,81,1_39159987_81,1_39159987_81
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr1,152841086,184571011,31729925,deletion,1,,-1,-1,,,True,1_152841086,250,1_152841086_250,1_152841086_250
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr1,170653865,82228237,-88425628,translocation,16,,-1,-1,,,True,1_170653865,292,1_170653865_292,1_170653865_292
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr3,32674918,32077641,-597277,translocation,7,,-1,-1,,,True,3_32674918,1998,3_32674918_1998,3_32674918_1998
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr3,194677914,194679618,1704,deletion,3,,-1,-1,,,True,3_194677914,2241,3_194677914_2241,3_194677914_2241
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr5,173026830,149167703,-23859127,translocation,7,3UTRintron,3,4,ATP6V0E1,ENST00000519374,True,5_173026830,2772,5_173026830_2772,5_173026830_2772
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr6,60239748,60240333,585,deletion,6,,-1,-1,,,True,6_60239748,2891,6_60239748_2891,6_60239748_2891
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr6,163436722,19392750,-144043972,translocation,9,intron,1,8,QKI,ENST00000361752,True,6_163436722,3041,6_163436722_3041,6_163436722_3041
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr9,21265640,23914936,2649296,deletion,9,,-1,-1,,,True,9_21265640,3519,9_21265640_3519,9_21265640_3519
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr9,131586460,131587218,758,deletion,9,intron,19,24,RAPGEF1,ENST00000372195,True,9_131586460,3636,9_131586460_3636,9_131586460_3636
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr10,133222492,133222946,454,deletion,10,intron,29,30,KNDC1,ENST00000304613,True,10_133222492,3843,10_133222492_3843,10_133222492_3843
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr12,919749,920560,811,deletion,12,intron,7,12,RAD52,ENST00000358495,True,12_919749,4032,12_919749_4032,12_919749_4032
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr12,17291813,17293003,1190,deletion,12,,-1,-1,,,True,12_17291813,4057,12_17291813_4057,12_17291813_4057
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr12,66057592,146651992,80594400,translocation,4,,-1,-1,,,True,12_66057592,2469,12_66057592_2469,12_66057592_2469
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr12,117105256,58329063,-58776193,translocation,17,UTRintron,2,3,TESC-AS1,ENST00000547006,True,12_117105256,4186,12_117105256_4186,12_117105256_4186
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr12,124870704,50868926,-74001778,translocation,3,,-1,-1,,,True,12_124870704,2026,12_124870704_2026,12_124870704_2026
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr16,52961972,113854978,60893006,translocation,9,,-1,-1,,,True,16_52961972,3615,16_52961972_3615,16_52961972_3615
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr17,5263272,85336201,80072929,translocation,5,,-1,-1,,,True,17_5263272,2649,17_5263272_2649,17_5263272_2649
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr17,78731787,23187367,-55544420,translocation,7,intron,1,13,CYTH1,ENST00000361101,True,17_78731787,3087,17_78731787_3087,17_78731787_3087
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr17,80665522,39584122,-41081400,translocation,21,intron,3,34,RPTOR,ENST00000306801,True,17_80665522,4843,17_80665522_4843,17_80665522_4843
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr18,79145078,79145982,904,deletion,18,intron,6,30,ATP9B,ENST00000426216,True,18_79145078,4947,18_79145078_4947,18_79145078_4947
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr19,12016837,116068768,104051931,translocation,4,intron,3,4,ZNF433,ENST00000344980,True,19_12016837,2431,19_12016837_2431,19_12016837_2431
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr19,27353199,27353678,479,deletion,19,,-1,-1,,,True,19_27353199,4975,19_27353199_4975,19_27353199_4975
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr20,17081241,118741601,101660360,translocation,6,,-1,-1,,,True,20_17081241,2972,20_17081241_2972,20_17081241_2972
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr21,10419916,10422731,2815,deletion,21,,-1,-1,,,True,21_10419916,5114,21_10419916_5114,21_10419916_5114
t2_IPMN_LGD_case3_S2,IPMN_LGD_case3_S2,case3_S2_IPMN_LGD,case3,case3_S2,IPMN_LGD,t2,chr21,39908212,122850295,82942083,translocation,6,intron,2,3,PCP4,ENST00000328619,True,21_39908212,2982,21_39908212_2982,21_39908212_2982
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr1,152841085,184571011,31729926,deletion,1,,-1,-1,,,True,1_152841085,81,1_152841085_81,1_152841085_81
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr1,230975196,113160857,-117814339,translocation,3,intron,1,23,TTC13,ENST00000366661,True,1_230975196,122,1_230975196_122,1_230975196_122
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr2,71160496,25791294,-45369202,translocation,21,,-1,-1,,,True,2_71160496,1372,2_71160496_1372,2_71160496_1372
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr2,90288688,91527758,1239070,inversion,2,,-1,-1,,,True,2_90288688,1379,2_90288688_1379,2_90288688_1379
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr3,13271181,5804825,-7466356,translocation,7,,-1,-1,,,True,3_13271181,1399,3_13271181_1399,3_13271181_1399
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr3,194845499,194846271,772,deletion,3,,-1,-1,,,True,3_194845499,1421,3_194845499_1421,3_194845499_1421
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr4,93984773,98281546,4296773,translocation,9,,-1,-1,,,True,4_93984773,1448,4_93984773_1448,4_93984773_1448
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr4,162576204,48537845,-114038359,translocation,6,,-1,-1,,,True,4_162576204,1453,4_162576204_1453,4_162576204_1453
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr5,163022783,153741431,-9281352,translocation,6,,-1,-1,,,True,5_163022783,1474,5_163022783_1474,5_163022783_1474
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr6,3145053,3146268,1215,deletion,6,intron,6,7,BPHL,ENST00000380379,True,6_3145053,1477,6_3145053_1477,6_3145053_1477
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr6,71265364,71267518,2154,deletion,6,,-1,-1,,,True,6_71265364,1490,6_71265364_1490,6_71265364_1490
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr9,21265639,23914936,2649297,deletion,9,,-1,-1,,,True,9_21265639,1539,9_21265639_1539,9_21265639_1539
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr10,42166988,42167248,260,deletion,10,,-1,-1,,,True,10_42166988,1552,10_42166988_1552,10_42166988_1552
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr10,96867988,102541897,5673909,translocation,8,5UTRintron,2,8,LCOR,ENST00000371103,True,10_96867988,1528,10_96867988_1528,10_96867988_1528
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr10,131217779,74129578,-57088201,translocation,16,intron,4,12,TCERG1L,ENST00000368642,True,10_131217779,1563,10_131217779_1563,10_131217779_1563
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr12,31119773,31120992,1219,deletion,12,intron,27,34,AC024940.1,ENST00000632817,True,12_31119773,1583,12_31119773_1583,12_31119773_1583
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr12,66057592,151916794,85859202,translocation,4,,-1,-1,,,True,12_66057592,1452,12_66057592_1452,12_66057592_1452
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr18,2523586,3179776,656190,translocation,X,,-1,-1,,,True,18_2523586,1650,18_2523586_1650,18_2523586_1650
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr18,51073863,51097151,23288,deletion,18,intron,10,12,SMAD4,ENST00000342988,True,18_51073863,1656,18_51073863_1656,18_51073863_1656
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr19,2843263,141541638,138698375,translocation,5,intron,1,4,ZNF555,ENST00000334241,True,19_2843263,1472,19_2843263_1472,19_2843263_1472
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr19,15778513,15779433,920,deletion,19,,-1,-1,,,True,19_15778513,1663,19_15778513_1663,19_15778513_1663
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr19,22405369,174886593,152481224,translocation,3,intron,1,4,ZNF98,ENST00000357774,True,19_22405369,1420,19_22405369_1420,19_22405369_1420
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr19,39535407,26435595,-13099812,translocation,5,,-1,-1,,,True,19_39535407,1457,19_39535407_1457,19_39535407_1457
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr20,3239701,116716288,113476587,translocation,7,,-1,-1,,,True,20_3239701,1512,20_3239701_1512,20_3239701_1512
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chr20,39663603,62357359,22693756,translocation,6,,-1,-1,,,True,20_39663603,1489,20_39663603_1489,20_39663603_1489
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr1,152841086,184571011,31729925,deletion,1,,-1,-1,,,True,1_152841086,48,1_152841086_48,1_152841086_48
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr1,183887155,28094124,-155793031,translocation,12,intron,8,19,RGL1,ENST00000304685,True,1_183887155,64,1_183887155_64,1_183887155_64
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr7,142786221,142797461,11240,deletion,7,,-1,-1,,,True,7_142786221,830,7_142786221_830,7_142786221_830
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr12,5006916,55532617,50525701,translocation,19,,-1,-1,,,True,12_5006916,845,12_5006916_845,12_5006916_845
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr12,66057592,69568400,3510808,translocation,4,,-1,-1,,,True,12_66057592,808,12_66057592_808,12_66057592_808
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr12,66057592,75846880,9789288,translocation,4,,-1,-1,,,True,12_66057592,809,12_66057592_809,12_66057592_809
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr12,86978782,133254262,46275480,translocation,8,,-1,-1,,,True,12_86978782,838,12_86978782_838,12_86978782_838
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr12,98948871,38758774,-60190097,translocation,8,intron,17,26,ANKS1B,ENST00000547776,True,12_98948871,834,12_98948871_834,12_98948871_834
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr14,44709429,44756501,47072,deletion,14,,-1,-1,,,True,14_44709429,851,14_44709429_851,14_44709429_851
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr18,13743241,151606906,137863665,translocation,5,intron,8,12,RNMT,ENST00000592764,True,18_13743241,815,18_13743241_815,18_13743241_815
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr19,1441999,65793588,64351589,translocation,8,,-1,-1,,,True,19_1441999,837,19_1441999_837,19_1441999_837
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr20,8719032,148395460,139676428,translocation,5,intron,14,32,PLCB1,ENST00000338037,True,20_8719032,814,20_8719032_814,20_8719032_814
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chr22,11211593,11212877,1284,deletion,22,,-1,-1,,,True,22_11211593,877,22_11211593_877,22_11211593_877
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr1,26725108,57311678,30586570,deletion,1,intron,1,20,ARID1A,ENST00000324856,True,1_26725108,5,1_26725108_5,1_26725108_5
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr1,27050627,70104933,43054306,tandem-duplication,1,,-1,-1,,,True,1_27050627,6,1_27050627_6,1_27050627_6
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr1,49780717,50021250,240533,deletion,1,intron,2,14,AGBL4,ENST00000371839,True,1_49780717,7,1_49780717_7,1_49780717_7
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr1,56534153,70104997,13570844,deletion,1,intron,2,6,PLPP3,ENST00000371250,True,1_56534153,8,1_56534153_8,1_56534153_8
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr2,4618729,116141772,111523043,translocation,8,,-1,-1,,,True,2_4618729,19,2_4618729_19,2_4618729_19
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr2,141132597,141264886,132289,deletion,2,intron,7,91,LRP1B,ENST00000389484,True,2_141132597,136,2_141132597_136,2_141132597_136
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr2,158415410,16176392,-142239018,translocation,6,intron,1,14,CCDC148,ENST00000283233,True,2_158415410,137,2_158415410_137,2_158415410_137
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr2,232953196,234564600,1611404,deletion,2,intron,3,15,NGEF,ENST00000264051,True,2_232953196,138,2_232953196_138,2_232953196_138
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr3,76594586,76598652,4066,inversion,3,intron,2,27,ROBO2,ENST00000487694,True,3_76594586,144,3_76594586_144,3_76594586_144
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr3,76594980,120917072,44322092,translocation,7,intron,2,27,ROBO2,ENST00000487694,True,3_76594980,143,3_76594980_143,3_76594980_143
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr4,177536955,177819224,282269,deletion,4,,-1,-1,,,True,4_177536955,154,4_177536955_154,4_177536955_154
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr6,27175816,32536263,5360447,deletion,6,,-1,-1,,,True,6_27175816,157,6_27175816_157,6_27175816_157
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr7,23316237,23424676,108439,deletion,7,intron,12,15,IGF2BP3,ENST00000258729,True,7_23316237,160,7_23316237_160,7_23316237_160
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr9,836073,4353668,3517595,deletion,9,,-1,-1,,,True,9_836073,164,9_836073_164,9_836073_164
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr9,24628256,24632651,4395,deletion,9,,-1,-1,,,True,9_24628256,165,9_24628256_165,9_24628256_165
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr12,66057592,156698723,90641131,translocation,6,,-1,-1,,,True,12_66057592,159,12_66057592_159,12_66057592_159
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr13,20151130,20211735,60605,deletion,13,5UTRintron,1,2,GJA3,ENST00000241125,True,13_20151130,169,13_20151130_169,13_20151130_169
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr13,69246661,69332810,86149,deletion,13,UTRintron,1,4,LINC00383,ENST00000433664,True,13_69246661,171,13_69246661_171,13_69246661_171
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr14,84380429,84382307,1878,deletion,14,,-1,-1,,,True,14_84380429,172,14_84380429_172,14_84380429_172
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr15,91918447,50532560,-41385887,translocation,22,intron,2,10,SLCO3A1,ENST00000318445,True,15_91918447,173,15_91918447_173,15_91918447_173
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr17,40535313,41866316,1331003,deletion,17,,-1,-1,,,True,17_40535313,178,17_40535313_178,17_40535313_178
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,3,5,KLHL10,ENST00000293303,True,17_41845529,180,17_41845529_180,17_41845529_180
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr17,41864328,51810106,9945778,deletion,17,intron,1,2,KLHL11,ENST00000319121,True,17_41864328,179,17_41864328_179,17_41864328_179
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr19,2840227,33400674,30560447,translocation,9,,-1,-1,,,True,19_2840227,166,19_2840227_166,19_2840227_166
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,2367022,5033239,2666217,inversion,20,,-1,-1,,,True,20_2367022,182,20_2367022_182,20_2367022_182
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,2519404,5299904,2780500,deletion,20,5UTRintron,1,8,ZNF343,ENST00000612935,True,20_2519404,183,20_2519404_183,20_2519404_183
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,2800268,4064126,1263858,inversion,20,intron,1,14,CPXM1,ENST00000380605,True,20_2800268,184,20_2800268_184,20_2800268_184
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,9,20,SEC23B,ENST00000336714,True,20_18528541,185,20_18528541_185,20_18528541_185
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,18530426,23048775,4518349,inversion,20,intron,9,20,SEC23B,ENST00000336714,True,20_18530426,188,20_18530426_188,20_18530426_188
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,18531523,24650651,6119128,deletion,20,intron,10,20,SEC23B,ENST00000336714,True,20_18531523,189,20_18531523_189,20_18531523_189
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,11,20,SEC23B,ENST00000336714,True,20_18532706,190,20_18532706_190,20_18532706_190
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,18927198,22381877,3454679,inversion,20,,-1,-1,,,True,20_18927198,192,20_18927198_192,20_18927198_192
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,18947946,18948265,319,inversion,20,,-1,-1,,,True,20_18947946,191,20_18947946_191,20_18947946_191
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chr20,64132698,64133855,1157,deletion,20,,-1,-1,,,True,20_64132698,194,20_64132698_194,20_64132698_194
t2_IPMN_LGD_case4_S1,IPMN_LGD_case4_S1,case4_S1_IPMN_LGD,case4,case4_S1,IPMN_LGD,t2,chrX,122078860,122145565,66705,deletion,X,,-1,-1,,,True,X_122078860,196,X_122078860_196,X_122078860_196
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr2,1531072,1532000,928,deletion,2,intron,15,17,TPO,ENST00000345913,True,2_1531072,26,2_1531072_26,2_1531072_26
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr6,162151402,162488453,337051,deletion,6,intron,4,12,PRKN,ENST00000366898,True,6_162151402,266,6_162151402_266,6_162151402_266
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr10,38969722,26775352,-12194370,translocation,17,,-1,-1,,,True,10_38969722,269,10_38969722_269,10_38969722_269
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr12,66057591,40621759,-25435832,translocation,21,,-1,-1,,,True,12_66057591,270,12_66057591_270,12_66057591_270
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr17,41864185,51810106,9945921,deletion,17,intron,1,2,KLHL11,ENST00000319121,True,17_41864185,276,17_41864185_276,17_41864185_276
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr17,80314119,80315631,1512,deletion,17,intron,15,68,RNF213,ENST00000582970,True,17_80314119,277,17_80314119_277,17_80314119_277
t5_PDAC_IPMN_LGD_case4_S2,PDAC_IPMN_LGD_case4_S2,case4_S2_PDAC_IPMN_LGD,case4,case4_S2,PDAC_IPMN_LGD,t5,chr20,18896972,18948164,51192,deletion,20,,-1,-1,,,True,20_18896972,278,20_18896972_278,20_18896972_278
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr1,4616188,31722306,27106118,deletion,1,,-1,-1,,,True,1_4616188,16,1_4616188_16,1_4616188_16
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr1,84447647,57135397,-27312250,translocation,4,,-1,-1,,,True,1_84447647,40,1_84447647_40,1_84447647_40
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr2,175433472,142659902,-32773570,translocation,7,UTRintron,2,3,AC093459.1,ENST00000444567,True,2_175433472,1024,2_175433472_1024,2_175433472_1024
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr4,190022636,11310632,-178712004,translocation,Y,,-1,-1,,,True,4_190022636,1110,4_190022636_1110,4_190022636_1110
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr6,32474896,32533023,58127,deletion,6,,-1,-1,,,True,6_32474896,1121,6_32474896_1121,6_32474896_1121
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr6,162151402,162488453,337051,deletion,6,intron,4,12,PRKN,ENST00000366898,True,6_162151402,1126,6_162151402_1126,6_162151402_1126
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr10,1542062,1542837,775,deletion,10,intron,1,10,ADARB2,ENST00000381312,True,10_1542062,1150,10_1542062_1150,10_1542062_1150
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr10,26579997,26641300,61303,deletion,10,,-1,-1,,,True,10_26579997,1153,10_26579997_1153,10_26579997_1153
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr10,43181905,58829982,15648077,translocation,4,intron,7,8,CSGALNACT2,ENST00000374466,True,10_43181905,1107,10_43181905_1107,10_43181905_1107
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr11,110549216,11055087,-99494129,translocation,12,,-1,-1,,,True,11_110549216,1163,11_110549216_1163,11_110549216_1163
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr11,126632686,33177801,-93454885,translocation,13,intron,1,17,KIRREL3,ENST00000525144,True,11_126632686,1164,11_126632686_1164,11_126632686_1164
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr12,18171934,30137674,11965740,translocation,18,,-1,-1,,,True,12_18171934,1167,12_18171934_1167,12_18171934_1167
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr12,66057591,56503500,-9554091,translocation,18,,-1,-1,,,True,12_66057591,1174,12_66057591_1174,12_66057591_1174
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr12,66057592,49150012,-16907580,translocation,4,,-1,-1,,,True,12_66057592,1088,12_66057592_1088,12_66057592_1088
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chr19,2840227,33400642,30560415,translocation,9,,-1,-1,,,True,19_2840227,1141,19_2840227_1141,19_2840227_1141
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chrX,1127434,1128217,783,deletion,X,,-1,-1,,,True,X_1127434,1234,X_1127434_1234,X_1127434_1234
t2_IPMN_LGD_case4_S4,IPMN_LGD_case4_S4,case4_S4_IPMN_LGD,case4,case4_S4,IPMN_LGD,t2,chr1,156735534,56537805,-100197729,translocation,4,intron,6,8,RRNAD1,ENST00000368216,True,1_156735534,14,1_156735534_14,1_156735534_14
t2_IPMN_LGD_case4_S4,IPMN_LGD_case4_S4,case4_S4_IPMN_LGD,case4,case4_S4,IPMN_LGD,t2,chr1,236756295,236757203,908,deletion,1,intron,17,21,ACTN2,ENST00000542672,True,1_236756295,22,1_236756295_22,1_236756295_22
t2_IPMN_LGD_case4_S4,IPMN_LGD_case4_S4,case4_S4_IPMN_LGD,case4,case4_S4,IPMN_LGD,t2,chr6,52786311,52826660,40349,deletion,6,,-1,-1,,,True,6_52786311,256,6_52786311_256,6_52786311_256
t2_IPMN_LGD_case4_S4,IPMN_LGD_case4_S4,case4_S4_IPMN_LGD,case4,case4_S4,IPMN_LGD,t2,chr6,162151402,162488453,337051,deletion,6,intron,4,12,PRKN,ENST00000366898,True,6_162151402,257,6_162151402_257,6_162151402_257
t2_IPMN_LGD_case4_S4,IPMN_LGD_case4_S4,case4_S4_IPMN_LGD,case4,case4_S4,IPMN_LGD,t2,chr17,41047055,41054837,7782,deletion,17,exon,1,1,KRTAP2-1,ENST00000391419,True,17_41047055,278,17_41047055_278,17_41047055_278
t2_IPMN_LGD_case4_S4,IPMN_LGD_case4_S4,case4_S4_IPMN_LGD,case4,case4_S4,IPMN_LGD,t2,chr20,64132143,64133676,1533,deletion,20,,-1,-1,,,True,20_64132143,288,20_64132143_288,20_64132143_288
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr2,90393693,90395876,2183,deletion,2,,-1,-1,,,True,2_90393693,594,2_90393693_594,2_90393693_594
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr3,128628424,64043697,-64584727,translocation,X,intron,5,10,RPN1,ENST00000296255,True,3_128628424,620,3_128628424_620,3_128628424_620
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr5,178095822,178096734,912,deletion,5,,-1,-1,,,True,5_178095822,656,5_178095822_656,5_178095822_656
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr7,57490794,57495892,5098,deletion,7,,-1,-1,,,True,7_57490794,666,7_57490794_666,7_57490794_666
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr10,17575605,92538793,74963188,translocation,13,,-1,-1,,,True,10_17575605,685,10_17575605_685,10_17575605_685
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr10,26580090,26640641,60551,deletion,10,,-1,-1,,,True,10_26580090,686,10_26580090_686,10_26580090_686
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr11,100113860,55714490,-44399370,translocation,12,intron,13,25,CNTN5,ENST00000524871,True,11_100113860,691,11_100113860_691,11_100113860_691
t2_IPMN_LGD_case4_S5,IPMN_LGD_case4_S5,case4_S5_IPMN_LGD,case4,case4_S5,IPMN_LGD,t2,chr20,30995163,30998566,3403,tandem-duplication,20,,-1,-1,,,True,20_30995163,725,20_30995163_725,20_30995163_725
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,22638564,22695414,56850,deletion,1,intron,2,3,C1QA,ENST00000374642,True,1_22638564,40,1_22638564_40,1_22638564_40
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,47292658,47616493,323835,deletion,1,intron,8,17,STIL,ENST00000371877,True,1_47292658,81,1_47292658_81,1_47292658_81
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,77406215,132972071,55565856,translocation,12,intron,6,14,AK5,ENST00000354567,True,1_77406215,102,1_77406215_102,1_77406215_102
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,79930284,80356221,425937,deletion,1,,-1,-1,,,True,1_79930284,106,1_79930284_106,1_79930284_106
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,105608122,38489051,-67119071,translocation,2,UTRintron,1,6,LINC01676,ENST00000595309,True,1_105608122,130,1_105608122_130,1_105608122_130
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,105841274,38491124,-67350150,translocation,2,,-1,-1,,,True,1_105841274,131,1_105841274_131,1_105841274_131
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,153696590,12776953,-140919637,translocation,3,,-1,-1,,,True,1_153696590,191,1_153696590_191,1_153696590_191
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174196959,174212659,15700,inversion,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174196959,215,1_174196959_215,1_174196959_215
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174197756,177007895,2810139,tandem-duplication,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174197756,216,1_174197756_216,1_174197756_216
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174212832,174426313,213481,tandem-duplication,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174212832,217,1_174212832_217,1_174212832_217
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174218719,174695168,476449,inversion,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174218719,218,1_174218719_218,1_174218719_218
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174420409,174682889,262480,tandem-duplication,1,intron,13,21,RABGAP1L,ENST00000251507,True,1_174420409,219,1_174420409_219,1_174420409_219
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174431810,178164135,3732325,tandem-duplication,1,intron,13,21,RABGAP1L,ENST00000251507,True,1_174431810,220,1_174431810_220,1_174431810_220
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,174684785,178215903,3531118,inversion,1,intron,15,21,RABGAP1L,ENST00000251507,True,1_174684785,221,1_174684785_221,1_174684785_221
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,175139482,178215997,3076515,tandem-duplication,1,intron,17,19,TNN,ENST00000239462,True,1_175139482,222,1_175139482_222,1_175139482_222
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,178163503,178164569,1066,inversion,1,intron,1,18,RASAL2,ENST00000367649,True,1_178163503,226,1_178163503_226,1_178163503_226
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr1,229697523,7884707,-221812816,translocation,18,,-1,-1,,,True,1_229697523,280,1_229697523_280,1_229697523_280
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,29597892,29602954,5062,tandem-duplication,2,intron,3,29,ALK,ENST00000389048,True,2_29597892,346,2_29597892_346,2_29597892_346
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,38487611,38806477,318866,deletion,2,UTRintron,2,5,AC011247.1,ENST00000417039,True,2_38487611,3477,2_38487611_3477,2_38487611_3477
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,47369707,47468109,98402,deletion,2,intron,1,9,EPCAM,ENST00000263735,True,2_47369707,3478,2_47369707_3478,2_47369707_3478
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,50039290,50060965,21675,deletion,2,intron,20,22,NRXN1,ENST00000406316,True,2_50039290,3479,2_50039290_3479,2_50039290_3479
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,50340490,50409294,68804,deletion,2,intron,17,22,NRXN1,ENST00000406316,True,2_50340490,3480,2_50340490_3480,2_50340490_3480
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,138103897,138180676,76779,deletion,2,UTRintron,1,3,LINC01832,ENST00000446520,True,2_138103897,3489,2_138103897_3489,2_138103897_3489
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,207551648,207560665,9017,deletion,2,5UTRintron,1,8,CREB1,ENST00000430624,True,2_207551648,3491,2_207551648_3491,2_207551648_3491
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr2,232048803,232806977,758174,deletion,2,intron,5,21,DIS3L2,ENST00000325385,True,2_232048803,3493,2_232048803_3493,2_232048803_3493
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr3,1885554,2020478,134924,deletion,3,,-1,-1,,,True,3_1885554,3495,3_1885554_3495,3_1885554_3495
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr3,10079953,11362621,1282668,deletion,3,intron,30,43,FANCD2,ENST00000287647,True,3_10079953,3497,3_10079953_3497,3_10079953_3497
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr3,60024719,60029363,4644,deletion,3,intron,5,9,FHIT,ENST00000468189,True,3_60024719,3500,3_60024719_3500,3_60024719_3500
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr3,114366324,114408982,42658,deletion,3,5UTRintron,8,10,ZBTB20,ENST00000357258,True,3_114366324,3525,3_114366324_3525,3_114366324_3525
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr3,173097519,173102183,4664,deletion,3,intron,2,11,SPATA16,ENST00000351008,True,3_173097519,3528,3_173097519_3528,3_173097519_3528
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr3,175384474,175404891,20417,tandem-duplication,3,intron,5,14,NAALADL2,ENST00000454872,True,3_175384474,3529,3_175384474_3529,3_175384474_3529
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,721108,729622,8514,deletion,4,5UTRintron,1,11,PCGF3,ENST00000362003,True,4_721108,3533,4_721108_3533,4_721108_3533
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,5508731,6313571,804840,deletion,4,,-1,-1,,,True,4_5508731,3534,4_5508731_3534,4_5508731_3534
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,13226580,27635817,14409237,translocation,6,,-1,-1,,,True,4_13226580,3535,4_13226580_3535,4_13226580_3535
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,90121456,90152509,31053,deletion,4,,-1,-1,,,True,4_90121456,3541,4_90121456_3541,4_90121456_3541
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,90462868,90491661,28793,inversion,4,intron,4,11,CCSER1,ENST00000509176,True,4_90462868,3542,4_90462868_3542,4_90462868_3542
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,121795642,72894645,-48900997,translocation,8,,-1,-1,,,True,4_121795642,3543,4_121795642_3543,4_121795642_3543
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,134402403,134985677,583274,deletion,4,,-1,-1,,,True,4_134402403,3544,4_134402403_3544,4_134402403_3544
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,177223086,177244222,21136,inversion,4,,-1,-1,,,True,4_177223086,3545,4_177223086_3545,4_177223086_3545
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,177227957,177796318,568361,inversion,4,,-1,-1,,,True,4_177227957,3546,4_177227957_3546,4_177227957_3546
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,183047461,183056467,9006,deletion,4,,-1,-1,,,True,4_183047461,3547,4_183047461_3547,4_183047461_3547
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr4,189928327,190007703,79376,deletion,4,UTRintron,2,3,FRG1-DT,ENST00000506276,True,4_189928327,3551,4_189928327_3551,4_189928327_3551
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,21816,24102,2286,inversion,5,,-1,-1,,,True,5_21816,3552,5_21816_3552,5_21816_3552
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,661769,664619,2850,deletion,5,3UTRexon,4,4,TPPP,ENST00000360578,True,5_661769,3555,5_661769_3555,5_661769_3555
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,661769,94136311,93474542,translocation,8,3UTRexon,4,4,TPPP,ENST00000360578,True,5_661769,3556,5_661769_3556,5_661769_3556
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,664819,94136311,93471492,translocation,8,3UTRexon,4,4,TPPP,ENST00000360578,True,5_664819,3557,5_664819_3557,5_664819_3557
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,1397738,3210572,1812834,deletion,5,intron,14,15,SLC6A3,ENST00000270349,True,5_1397738,3559,5_1397738_3559,5_1397738_3559
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,3265802,129641112,126375310,translocation,8,,-1,-1,,,True,5_3265802,3561,5_3265802_3561,5_3265802_3561
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,3959647,5213592,1253945,deletion,5,,-1,-1,,,True,5_3959647,3563,5_3959647_3563,5_3959647_3563
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,5593637,5594905,1268,inversion,5,,-1,-1,,,True,5_5593637,3564,5_5593637_3564,5_5593637_3564
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,79280664,79295694,15030,deletion,5,intron,2,11,JMY,ENST00000396137,True,5_79280664,3568,5_79280664_3568,5_79280664_3568
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr5,100376306,100818210,441904,deletion,5,,-1,-1,,,True,5_100376306,3570,5_100376306_3570,5_100376306_3570
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr6,19636879,17050244,-2586635,translocation,X,,-1,-1,,,True,6_19636879,3573,6_19636879_3573,6_19636879_3573
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr7,80376318,80710387,334069,deletion,7,5UTRintron,1,17,CD36,ENST00000435819,True,7_80376318,3586,7_80376318_3586,7_80376318_3586
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr7,110774687,111050909,276222,deletion,7,intron,5,6,IMMP2L,ENST00000405709,True,7_110774687,3588,7_110774687_3588,7_110774687_3588
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr7,125502649,125857559,354910,deletion,7,,-1,-1,,,True,7_125502649,3589,7_125502649_3589,7_125502649_3589
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr7,151757264,152341503,584239,deletion,7,intron,3,16,PRKAG2,ENST00000287878,True,7_151757264,3594,7_151757264_3594,7_151757264_3594
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr7,158128069,158196127,68058,deletion,7,intron,9,22,PTPRN2,ENST00000389413,True,7_158128069,3596,7_158128069_3596,7_158128069_3596
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,4028206,4029473,1267,inversion,8,intron,4,70,CSMD1,ENST00000635120,True,8_4028206,3597,8_4028206_3597,8_4028206_3597
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,4086644,4087766,1122,inversion,8,intron,3,70,CSMD1,ENST00000635120,True,8_4086644,3598,8_4086644_3598,8_4086644_3598
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,6605310,6608423,3113,inversion,8,intron,12,14,MCPH1,ENST00000344683,True,8_6605310,3599,8_6605310_3599,8_6605310_3599
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,91316596,114272997,22956401,inversion,8,5UTRintron,4,18,SLC26A7,ENST00000617078,True,8_91316596,3603,8_91316596_3603,8_91316596_3603
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,91824718,91934801,110083,deletion,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91824718,3604,8_91824718_3604,8_91824718_3604
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,91825406,125554250,33728844,tandem-duplication,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91825406,3606,8_91825406_3606,8_91825406_3606
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,91826988,124537259,32710271,deletion,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91826988,3605,8_91826988_3605,8_91826988_3605
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,93026328,93341838,315510,deletion,8,,-1,-1,,,True,8_93026328,3607,8_93026328_3607,8_93026328_3607
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,124237762,131247144,7009382,inversion,8,UTRintron,1,3,AC090921.1,ENST00000523703,True,8_124237762,3608,8_124237762_3608,8_124237762_3608
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,124291941,124307242,15301,deletion,8,,-1,-1,,,True,8_124291941,3609,8_124291941_3609,8_124291941_3609
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,124397758,124957005,559247,tandem-duplication,8,,-1,-1,,,True,8_124397758,3610,8_124397758_3610,8_124397758_3610
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,124955770,124964606,8836,inversion,8,,-1,-1,,,True,8_124955770,3611,8_124955770_3611,8_124955770_3611
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,124955770,124963737,7967,inversion,8,,-1,-1,,,True,8_124955770,3613,8_124955770_3613,8_124955770_3613
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,124963749,132970381,8006632,inversion,8,,-1,-1,,,True,8_124963749,3612,8_124963749_3612,8_124963749_3612
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,125369472,133774652,8405180,tandem-duplication,8,,-1,-1,,,True,8_125369472,3614,8_125369472_3614,8_125369472_3614
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,126690483,126873286,182803,deletion,8,,-1,-1,,,True,8_126690483,3615,8_126690483_3615,8_126690483_3615
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,127185300,127714772,529472,deletion,8,UTRintron,3,9,CASC19,ENST00000641912,True,8_127185300,3616,8_127185300_3616,8_127185300_3616
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,131952091,131955013,2922,inversion,8,intron,5,23,EFR3A,ENST00000254624,True,8_131952091,3619,8_131952091_3619,8_131952091_3619
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,131971996,131974072,2076,inversion,8,intron,10,23,EFR3A,ENST00000254624,True,8_131971996,3618,8_131971996_3618,8_131971996_3618
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132102338,132351451,249113,deletion,8,intron,2,16,HHLA1,ENST00000414222,True,8_132102338,3620,8_132102338_3620,8_132102338_3620
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132190144,132854441,664297,deletion,8,intron,1,15,KCNQ3,ENST00000388996,True,8_132190144,3621,8_132190144_3621,8_132190144_3621
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132646493,133062396,415903,tandem-duplication,8,intron,3,12,LRRC6,ENST00000620350,True,8_132646493,3622,8_132646493_3622,8_132646493_3622
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132648221,133774728,1126507,inversion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648221,3624,8_132648221_3624,8_132648221_3624
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132648296,133774654,1126358,inversion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648296,3625,8_132648296_3625,8_132648296_3625
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132648301,133774725,1126424,deletion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648301,3623,8_132648301_3623,8_132648301_3623
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,132648308,133774921,1126613,tandem-duplication,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648308,3626,8_132648308_3626,8_132648308_3626
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,133062084,133775778,713694,inversion,8,intron,41,48,TG,ENST00000220616,True,8_133062084,3629,8_133062084_3629,8_133062084_3629
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,133062086,133776337,714251,inversion,8,intron,41,48,TG,ENST00000220616,True,8_133062086,3627,8_133062086_3627,8_133062086_3627
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,133062090,133774920,712830,deletion,8,intron,41,48,TG,ENST00000220616,True,8_133062090,3628,8_133062090_3628,8_133062090_3628
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,133347088,133768502,421414,deletion,8,,-1,-1,,,True,8_133347088,3630,8_133347088_3630,8_133347088_3630
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,133774947,133776205,1258,inversion,8,UTRintron,1,3,AC133634.1,ENST00000517695,True,8_133774947,3632,8_133774947_3632,8_133774947_3632
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr8,133775773,133776193,420,inversion,8,UTRintron,1,3,AC133634.1,ENST00000517695,True,8_133775773,3631,8_133775773_3631,8_133775773_3631
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr9,21934733,21955978,21245,inversion,9,3UTRexon,8,8,MTAP,ENST00000580900,True,9_21934733,3637,9_21934733_3637,9_21934733_3637
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr9,21939524,22023834,84310,inversion,9,,-1,-1,,,True,9_21939524,3638,9_21939524_3638,9_21939524_3638
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr9,38065156,38607445,542289,deletion,9,intron,1,6,SHB,ENST00000377707,True,9_38065156,3639,9_38065156_3639,9_38065156_3639
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,38713948,44908184,6194236,translocation,21,,-1,-1,,,True,10_38713948,3646,10_38713948_3646,10_38713948_3646
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,38714184,46308048,7593864,translocation,21,,-1,-1,,,True,10_38714184,3648,10_38714184_3648,10_38714184_3648
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,38714206,37433796,-1280410,translocation,21,,-1,-1,,,True,10_38714206,3647,10_38714206_3647,10_38714206_3647
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,38714368,36308648,-2405720,translocation,21,,-1,-1,,,True,10_38714368,3649,10_38714368_3649,10_38714368_3649
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,38863094,43904372,5041278,translocation,21,,-1,-1,,,True,10_38863094,3650,10_38863094_3650,10_38863094_3650
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,38866874,16559164,-22307710,translocation,21,,-1,-1,,,True,10_38866874,3651,10_38866874_3651,10_38866874_3651
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,45604455,46796610,1192155,deletion,10,,-1,-1,,,True,10_45604455,3656,10_45604455_3656,10_45604455_3656
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,46739298,23100894,-23638404,translocation,21,,-1,-1,,,True,10_46739298,3657,10_46739298_3657,10_46739298_3657
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr10,48291896,141644957,93353061,translocation,8,,-1,-1,,,True,10_48291896,3633,10_48291896_3633,10_48291896_3633
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,1803653,1938615,134962,deletion,11,,-1,-1,,,True,11_1803653,3659,11_1803653_3659,11_1803653_3659
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,7171796,183571445,176399649,translocation,3,,-1,-1,,,True,11_7171796,3530,11_7171796_3530,11_7171796_3530
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,63113239,101386127,38272888,deletion,11,intron,4,10,SLC22A24,ENST00000612278,True,11_63113239,3665,11_63113239_3665,11_63113239_3665
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,84090443,84134674,44231,inversion,11,intron,10,28,DLG2,ENST00000376104,True,11_84090443,3667,11_84090443_3667,11_84090443_3667
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,84147380,128323593,44176213,translocation,8,intron,9,28,DLG2,ENST00000376104,True,11_84147380,3617,11_84147380_3617,11_84147380_3617
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,95287343,167490,-95119853,translocation,5,,-1,-1,,,True,11_95287343,3553,11_95287343_3553,11_95287343_3553
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,95434562,66057592,-29376970,translocation,12,,-1,-1,,,True,11_95434562,3668,11_95434562_3668,11_95434562_3668
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr11,106409831,106413302,3471,deletion,11,,-1,-1,,,True,11_106409831,3669,11_106409831_3669,11_106409831_3669
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr12,66057591,183517056,117459465,translocation,2,,-1,-1,,,True,12_66057591,3490,12_66057591_3490,12_66057591_3490
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr12,71081559,97889607,26808048,deletion,12,UTRintron,1,5,AC025575.1,ENST00000548497,True,12_71081559,3673,12_71081559_3673,12_71081559_3673
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr12,101747635,78625439,-23122196,translocation,17,intron,20,21,GNPTAB,ENST00000299314,True,12_101747635,3674,12_101747635_3674,12_101747635_3674
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,16312012,33838617,17526605,translocation,14,,-1,-1,,,True,13_16312012,3681,13_16312012_3681,13_16312012_3681
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,16576276,10422038,-6154238,translocation,21,,-1,-1,,,True,13_16576276,3684,13_16576276_3684,13_16576276_3684
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,27214750,38198949,10984199,deletion,13,UTRintron,2,5,LINC02340,ENST00000620494,True,13_27214750,3687,13_27214750_3687,13_27214750_3687
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,27380110,38223841,10843731,tandem-duplication,13,,-1,-1,,,True,13_27380110,3688,13_27380110_3688,13_27380110_3688
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,29179483,46188227,17008744,inversion,13,intron,5,16,MTUS2,ENST00000612955,True,13_29179483,3689,13_29179483_3689,13_29179483_3689
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,30696215,38777503,8081288,tandem-duplication,13,,-1,-1,,,True,13_30696215,3690,13_30696215_3690,13_30696215_3690
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,33037529,33871497,833968,inversion,13,intron,1,5,KL,ENST00000380099,True,13_33037529,3691,13_33037529_3691,13_33037529_3691
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,33863190,46036216,12173026,inversion,13,intron,8,9,RFC3,ENST00000434425,True,13_33863190,3692,13_33863190_3692,13_33863190_3692
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,33872456,46065648,12193192,tandem-duplication,13,intron,8,9,RFC3,ENST00000434425,True,13_33872456,3693,13_33872456_3693,13_33872456_3693
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,38198940,46066520,7867580,deletion,13,,-1,-1,,,True,13_38198940,3694,13_38198940_3694,13_38198940_3694
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,38396822,38398911,2089,inversion,13,,-1,-1,,,True,13_38396822,3695,13_38396822_3695,13_38396822_3695
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,48282425,50644107,2361682,translocation,6,,-1,-1,,,True,13_48282425,3577,13_48282425_3577,13_48282425_3577
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,56532480,56699569,167089,deletion,13,,-1,-1,,,True,13_56532480,3697,13_56532480_3697,13_56532480_3697
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,65558402,65571455,13053,tandem-duplication,13,,-1,-1,,,True,13_65558402,3698,13_65558402_3698,13_65558402_3698
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,83680437,84678910,998473,deletion,13,,-1,-1,,,True,13_83680437,3700,13_83680437_3700,13_83680437_3700
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr13,112085613,112565956,480343,deletion,13,,-1,-1,,,True,13_112085613,3702,13_112085613_3702,13_112085613_3702
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,49109723,52098435,2988712,deletion,14,,-1,-1,,,True,14_49109723,3704,14_49109723_3704,14_49109723_3704
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,49585817,49620671,34854,inversion,14,intron,2,3,RPS29,ENST00000396020,True,14_49585817,3705,14_49585817_3705,14_49585817_3705
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,49595962,52117334,2521372,deletion,14,intron,1,3,RPS29,ENST00000557111,True,14_49595962,3706,14_49595962_3706,14_49595962_3706
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,52117177,52166973,49796,inversion,14,UTRintron,2,3,LINC02319,ENST00000555852,True,14_52117177,3707,14_52117177_3707,14_52117177_3707
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,77867282,78546081,678799,deletion,14,intron,4,11,ADCK1,ENST00000238561,True,14_77867282,3709,14_77867282_3709,14_77867282_3709
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,82212902,72634067,-9578835,translocation,8,,-1,-1,,,True,14_82212902,3601,14_82212902_3601,14_82212902_3601
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr14,82620861,72888739,-9732122,translocation,8,,-1,-1,,,True,14_82620861,3602,14_82620861_3602,14_82620861_3602
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr15,34376058,23188801,-11187257,translocation,19,,-1,-1,,,True,15_34376058,3713,15_34376058_3713,15_34376058_3713
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr15,36303723,36306296,2573,tandem-duplication,15,,-1,-1,,,True,15_36303723,3714,15_36303723_3714,15_36303723_3714
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr15,86766812,86774261,7449,inversion,15,intron,21,23,AGBL1,ENST00000635782,True,15_86766812,3715,15_86766812_3715,15_86766812_3715
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr15,86772376,87285698,513322,tandem-duplication,15,intron,21,23,AGBL1,ENST00000635782,True,15_86772376,3716,15_86772376_3716,15_86772376_3716
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr15,86774265,87291331,517066,inversion,15,intron,21,23,AGBL1,ENST00000635782,True,15_86774265,3717,15_86774265_3717,15_86774265_3717
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr16,67192850,67195182,2332,deletion,16,exon,2,10,E2F4,ENST00000379378,True,16_67192850,3720,16_67192850_3720,16_67192850_3720
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr17,51002337,65734914,14732577,deletion,17,intron,12,30,SPAG9,ENST00000262013,True,17_51002337,3723,17_51002337_3723,17_51002337_3723
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr18,110425,56842344,56731919,translocation,Y,,-1,-1,,,True,18_110425,3727,18_110425_3727,18_110425_3727
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr18,50449703,52038400,1588697,deletion,18,,-1,-1,,,True,18_50449703,3731,18_50449703_3731,18_50449703_3731
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr19,5522118,5523215,1097,deletion,19,,-1,-1,,,True,19_5522118,3733,19_5522118_3733,19_5522118_3733
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr19,29232356,2867552,-26364804,translocation,5,,-1,-1,,,True,19_29232356,3560,19_29232356_3560,19_29232356_3560
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr19,39064073,3375752,-35688321,translocation,5,,-1,-1,,,True,19_39064073,3562,19_39064073_3562,19_39064073_3562
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr19,39064837,39065405,568,inversion,19,,-1,-1,,,True,19_39064837,3734,19_39064837_3734,19_39064837_3734
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr19,50017527,231578972,181561445,translocation,2,5UTRintron,2,15,VRK3,ENST00000599538,True,19_50017527,3492,19_50017527_3492,19_50017527_3492
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr20,4995713,5514950,519237,deletion,20,5UTRintron,1,17,SLC23A2,ENST00000379333,True,20_4995713,3737,20_4995713_3737,20_4995713_3737
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr20,15213843,15661618,447775,deletion,20,5UTRintron,1,14,MACROD2,ENST00000402914,True,20_15213843,3738,20_15213843_3738,20_15213843_3738
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr20,29892013,29893220,1207,deletion,20,,-1,-1,,,True,20_29892013,3745,20_29892013_3745,20_29892013_3745
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr20,61946972,61948103,1131,deletion,20,,-1,-1,,,True,20_61946972,3750,20_61946972_3750,20_61946972_3750
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,9916147,25115504,15199357,inversion,21,,-1,-1,,,True,21_9916147,3754,21_9916147_3754,21_9916147_3754
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,9954042,9957062,3020,deletion,21,,-1,-1,,,True,21_9954042,3755,21_9954042_3755,21_9954042_3755
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,10372695,10421670,48975,inversion,21,,-1,-1,,,True,21_10372695,3757,21_10372695_3757,21_10372695_3757
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,10421670,11025541,603871,translocation,22,,-1,-1,,,True,21_10421670,3759,21_10421670_3759,21_10421670_3759
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,16051748,33593763,17542015,inversion,21,UTRintron,1,6,MIR99AHG,ENST00000635845,True,21_16051748,3762,21_16051748_3762,21_16051748_3762
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,16051989,33422345,17370356,tandem-duplication,21,UTRintron,1,6,MIR99AHG,ENST00000635845,True,21_16051989,3763,21_16051989_3763,21_16051989_3763
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,17390712,25140582,7749870,inversion,21,,-1,-1,,,True,21_17390712,3764,21_17390712_3764,21_17390712_3764
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,17416036,38834099,21418063,tandem-duplication,21,,-1,-1,,,True,21_17416036,3765,21_17416036_3765,21_17416036_3765
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,17416368,46311375,28895007,inversion,21,,-1,-1,,,True,21_17416368,3766,21_17416368_3766,21_17416368_3766
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,17450065,46276457,28826392,deletion,21,,-1,-1,,,True,21_17450065,3767,21_17450065_3767,21_17450065_3767
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,18087457,27642887,9555430,inversion,21,5UTRintron,2,7,CHODL,ENST00000400128,True,21_18087457,3768,21_18087457_3768,21_18087457_3768
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,23048560,23051286,2726,deletion,21,,-1,-1,,,True,21_23048560,3769,21_23048560_3769,21_23048560_3769
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,23104535,25895137,2790602,tandem-duplication,21,UTRintron,2,5,AP001116.1,ENST00000421604,True,21_23104535,3770,21_23104535_3770,21_23104535_3770
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,28628457,45009591,16381134,inversion,21,UTRintron,1,5,AF165147.1,ENST00000433310,True,21_28628457,3771,21_28628457_3771,21_28628457_3771
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,33543283,41688119,8144836,inversion,21,intron,1,12,SON,ENST00000356577,True,21_33543283,3772,21_33543283_3772,21_33543283_3772
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr21,41714756,45123415,3408659,inversion,21,UTRintron,2,6,LINC00479,ENST00000412102,True,21_41714756,3773,21_41714756_3773,21_41714756_3773
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chr22,25820045,185827018,160006973,translocation,4,intron,12,44,MYO18B,ENST00000335473,True,22_25820045,3548,22_25820045_3548,22_25820045_3548
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chrX,27158782,27619432,460650,deletion,X,UTRintron,1,2,AC112493.1,ENST00000609836,True,X_27158782,3787,X_27158782_3787,X_27158782_3787
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chrX,29841607,30018462,176855,deletion,X,intron,6,11,IL1RAPL1,ENST00000378993,True,X_29841607,3788,X_29841607_3788,X_29841607_3788
t4_IPMN_HGD_PDAC_case6_S7,IPMN_HGD_PDAC_case6_S7,case6_S7_IPMN_HGD_PDAC,case6,case6_S7,IPMN_HGD_PDAC,t4,chrX,90738046,90747036,8990,deletion,X,,-1,-1,,,True,X_90738046,3790,X_90738046_3790,X_90738046_3790
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,22638564,22695414,56850,deletion,1,intron,2,3,C1QA,ENST00000374642,True,1_22638564,5,1_22638564_5,1_22638564_5
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,47292658,47616493,323835,deletion,1,intron,8,17,STIL,ENST00000371877,True,1_47292658,10,1_47292658_10,1_47292658_10
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,79930283,80356221,425938,deletion,1,,-1,-1,,,True,1_79930283,16,1_79930283_16,1_79930283_16
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,105608122,38489051,-67119071,translocation,2,UTRintron,1,6,LINC01676,ENST00000595309,True,1_105608122,21,1_105608122_21,1_105608122_21
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,105841274,38491124,-67350150,translocation,2,,-1,-1,,,True,1_105841274,22,1_105841274_22,1_105841274_22
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174196960,174212659,15699,inversion,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174196960,33,1_174196960_33,1_174196960_33
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174197756,177007895,2810139,tandem-duplication,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174197756,34,1_174197756_34,1_174197756_34
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174212832,174426313,213481,tandem-duplication,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174212832,35,1_174212832_35,1_174212832_35
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174218719,174695168,476449,inversion,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174218719,36,1_174218719_36,1_174218719_36
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174420409,174682889,262480,tandem-duplication,1,intron,13,21,RABGAP1L,ENST00000251507,True,1_174420409,37,1_174420409_37,1_174420409_37
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174431810,178164134,3732324,tandem-duplication,1,intron,13,21,RABGAP1L,ENST00000251507,True,1_174431810,38,1_174431810_38,1_174431810_38
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,174684785,178215903,3531118,inversion,1,intron,15,21,RABGAP1L,ENST00000251507,True,1_174684785,39,1_174684785_39,1_174684785_39
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,175139482,178215997,3076515,tandem-duplication,1,intron,17,19,TNN,ENST00000239462,True,1_175139482,40,1_175139482_40,1_175139482_40
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,178163503,178164569,1066,inversion,1,intron,1,18,RASAL2,ENST00000367649,True,1_178163503,42,1_178163503_42,1_178163503_42
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr1,190181637,128180779,-62000858,translocation,8,intron,6,8,BRINP3,ENST00000367462,True,1_190181637,46,1_190181637_46,1_190181637_46
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr2,29597892,29602918,5026,tandem-duplication,2,intron,3,29,ALK,ENST00000389048,True,2_29597892,57,2_29597892_57,2_29597892_57
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr2,38487611,38806477,318866,deletion,2,UTRintron,2,5,AC011247.1,ENST00000417039,True,2_38487611,400,2_38487611_400,2_38487611_400
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr2,50039290,50060965,21675,deletion,2,intron,20,22,NRXN1,ENST00000406316,True,2_50039290,401,2_50039290_401,2_50039290_401
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr2,50340495,50409294,68799,deletion,2,intron,17,22,NRXN1,ENST00000406316,True,2_50340495,402,2_50340495_402,2_50340495_402
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr2,138103897,138180676,76779,deletion,2,UTRintron,1,3,LINC01832,ENST00000446520,True,2_138103897,404,2_138103897_404,2_138103897_404
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr3,1885554,2020478,134924,deletion,3,,-1,-1,,,True,3_1885554,408,3_1885554_408,3_1885554_408
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr3,10079953,11362621,1282668,deletion,3,intron,30,43,FANCD2,ENST00000287647,True,3_10079953,409,3_10079953_409,3_10079953_409
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr3,60024719,60029363,4644,deletion,3,intron,5,9,FHIT,ENST00000468189,True,3_60024719,410,3_60024719_410,3_60024719_410
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr3,114366324,114408982,42658,deletion,3,5UTRintron,8,10,ZBTB20,ENST00000357258,True,3_114366324,415,3_114366324_415,3_114366324_415
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr3,173097519,173102183,4664,deletion,3,intron,2,11,SPATA16,ENST00000351008,True,3_173097519,416,3_173097519_416,3_173097519_416
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr3,175384474,175404891,20417,tandem-duplication,3,intron,5,14,NAALADL2,ENST00000454872,True,3_175384474,417,3_175384474_417,3_175384474_417
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,5508731,6313571,804840,deletion,4,,-1,-1,,,True,4_5508731,418,4_5508731_418,4_5508731_418
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,90462868,90491661,28793,inversion,4,intron,4,11,CCSER1,ENST00000509176,True,4_90462868,421,4_90462868_421,4_90462868_421
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,121795642,72894645,-48900997,translocation,8,,-1,-1,,,True,4_121795642,422,4_121795642_422,4_121795642_422
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,134402403,134985677,583274,deletion,4,,-1,-1,,,True,4_134402403,423,4_134402403_423,4_134402403_423
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,177223086,177244222,21136,inversion,4,,-1,-1,,,True,4_177223086,424,4_177223086_424,4_177223086_424
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,183047461,183056467,9006,deletion,4,,-1,-1,,,True,4_183047461,425,4_183047461_425,4_183047461_425
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr4,189928327,190007703,79376,deletion,4,UTRintron,2,3,FRG1-DT,ENST00000506276,True,4_189928327,427,4_189928327_427,4_189928327_427
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,21816,24101,2285,inversion,5,,-1,-1,,,True,5_21816,428,5_21816_428,5_21816_428
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,661769,664619,2850,deletion,5,3UTRexon,4,4,TPPP,ENST00000360578,True,5_661769,429,5_661769_429,5_661769_429
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,661769,94136311,93474542,translocation,8,3UTRexon,4,4,TPPP,ENST00000360578,True,5_661769,430,5_661769_430,5_661769_430
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,664819,94136311,93471492,translocation,8,3UTRexon,4,4,TPPP,ENST00000360578,True,5_664819,431,5_664819_431,5_664819_431
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,1291313,1294213,2900,inversion,5,intron,2,16,TERT,ENST00000310581,True,5_1291313,432,5_1291313_432,5_1291313_432
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,1397738,3210572,1812834,deletion,5,intron,14,15,SLC6A3,ENST00000270349,True,5_1397738,433,5_1397738_433,5_1397738_433
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,3265802,129641112,126375310,translocation,8,,-1,-1,,,True,5_3265802,434,5_3265802_434,5_3265802_434
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,3959647,5213592,1253945,deletion,5,,-1,-1,,,True,5_3959647,435,5_3959647_435,5_3959647_435
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,5593637,5594905,1268,inversion,5,,-1,-1,,,True,5_5593637,436,5_5593637_436,5_5593637_436
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,79280664,79295694,15030,deletion,5,intron,2,11,JMY,ENST00000396137,True,5_79280664,438,5_79280664_438,5_79280664_438
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr5,100376306,100818210,441904,deletion,5,,-1,-1,,,True,5_100376306,439,5_100376306_439,5_100376306_439
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr7,80376300,80710387,334087,deletion,7,5UTRintron,1,17,CD36,ENST00000435819,True,7_80376300,442,7_80376300_442,7_80376300_442
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr7,110774687,111050909,276222,deletion,7,intron,5,6,IMMP2L,ENST00000405709,True,7_110774687,443,7_110774687_443,7_110774687_443
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr7,125502649,125857559,354910,deletion,7,,-1,-1,,,True,7_125502649,444,7_125502649_444,7_125502649_444
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr7,151757264,152341503,584239,deletion,7,intron,3,16,PRKAG2,ENST00000287878,True,7_151757264,447,7_151757264_447,7_151757264_447
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,91316596,114272997,22956401,inversion,8,5UTRintron,4,18,SLC26A7,ENST00000617078,True,8_91316596,451,8_91316596_451,8_91316596_451
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,91824718,91934801,110083,deletion,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91824718,452,8_91824718_452,8_91824718_452
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,91825406,125554252,33728846,tandem-duplication,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91825406,453,8_91825406_453,8_91825406_453
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,91826984,124537259,32710275,deletion,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91826984,454,8_91826984_454,8_91826984_454
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,93026326,93341838,315512,deletion,8,,-1,-1,,,True,8_93026326,455,8_93026326_455,8_93026326_455
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,118198268,118207892,9624,inversion,8,intron,4,5,SAMD12,ENST00000409003,True,8_118198268,456,8_118198268_456,8_118198268_456
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,124237762,131247144,7009382,inversion,8,UTRintron,1,3,AC090921.1,ENST00000523703,True,8_124237762,457,8_124237762_457,8_124237762_457
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,124397758,124957005,559247,tandem-duplication,8,,-1,-1,,,True,8_124397758,458,8_124397758_458,8_124397758_458
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,124407470,133209603,8802133,inversion,8,,-1,-1,,,True,8_124407470,459,8_124407470_459,8_124407470_459
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,124955770,124964606,8836,inversion,8,,-1,-1,,,True,8_124955770,460,8_124955770_460,8_124955770_460
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,124955770,124963737,7967,inversion,8,,-1,-1,,,True,8_124955770,461,8_124955770_461,8_124955770_461
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,124963749,132970381,8006632,inversion,8,,-1,-1,,,True,8_124963749,462,8_124963749_462,8_124963749_462
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,125369472,133774652,8405180,tandem-duplication,8,,-1,-1,,,True,8_125369472,463,8_125369472_463,8_125369472_463
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,126690483,126873286,182803,deletion,8,,-1,-1,,,True,8_126690483,464,8_126690483_464,8_126690483_464
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,131952091,131955013,2922,inversion,8,intron,5,23,EFR3A,ENST00000254624,True,8_131952091,466,8_131952091_466,8_131952091_466
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,131971996,131974072,2076,inversion,8,intron,10,23,EFR3A,ENST00000254624,True,8_131971996,465,8_131971996_465,8_131971996_465
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132102339,132351453,249114,deletion,8,intron,2,16,HHLA1,ENST00000414222,True,8_132102339,467,8_132102339_467,8_132102339_467
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132190144,132854441,664297,deletion,8,intron,1,15,KCNQ3,ENST00000388996,True,8_132190144,468,8_132190144_468,8_132190144_468
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132646493,133062396,415903,tandem-duplication,8,intron,3,12,LRRC6,ENST00000620350,True,8_132646493,469,8_132646493_469,8_132646493_469
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132648293,133774728,1126435,inversion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648293,471,8_132648293_471,8_132648293_471
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132648296,133774654,1126358,inversion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648296,472,8_132648296_472,8_132648296_472
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132648296,133774921,1126625,tandem-duplication,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648296,473,8_132648296_473,8_132648296_473
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,132648301,133774725,1126424,deletion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648301,470,8_132648301_470,8_132648301_470
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,133062084,133775778,713694,inversion,8,intron,41,48,TG,ENST00000220616,True,8_133062084,476,8_133062084_476,8_133062084_476
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,133062086,133776337,714251,inversion,8,intron,41,48,TG,ENST00000220616,True,8_133062086,475,8_133062086_475,8_133062086_475
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,133062090,133774920,712830,deletion,8,intron,41,48,TG,ENST00000220616,True,8_133062090,474,8_133062090_474,8_133062090_474
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,133347087,133768502,421415,deletion,8,,-1,-1,,,True,8_133347087,477,8_133347087_477,8_133347087_477
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,133774920,133776205,1285,inversion,8,UTRintron,1,3,AC133634.1,ENST00000517695,True,8_133774920,479,8_133774920_479,8_133774920_479
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr8,133775773,133776193,420,inversion,8,UTRintron,1,3,AC133634.1,ENST00000517695,True,8_133775773,478,8_133775773_478,8_133775773_478
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr9,21934733,21955978,21245,inversion,9,3UTRexon,8,8,MTAP,ENST00000580900,True,9_21934733,480,9_21934733_480,9_21934733_480
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr9,21939524,22023834,84310,inversion,9,,-1,-1,,,True,9_21939524,481,9_21939524_481,9_21939524_481
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr9,32080548,46878246,14797698,translocation,X,,-1,-1,,,True,9_32080548,482,9_32080548_482,9_32080548_482
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr9,38065156,38607445,542289,deletion,9,intron,1,6,SHB,ENST00000377707,True,9_38065156,483,9_38065156_483,9_38065156_483
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,38713948,44908179,6194231,translocation,21,,-1,-1,,,True,10_38713948,488,10_38713948_488,10_38713948_488
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,38714184,46308048,7593864,translocation,21,,-1,-1,,,True,10_38714184,491,10_38714184_491,10_38714184_491
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,38714206,37433796,-1280410,translocation,21,,-1,-1,,,True,10_38714206,490,10_38714206_490,10_38714206_490
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,38714368,36308648,-2405720,translocation,21,,-1,-1,,,True,10_38714368,489,10_38714368_489,10_38714368_489
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,38863094,43904372,5041278,translocation,21,,-1,-1,,,True,10_38863094,492,10_38863094_492,10_38863094_492
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,45604455,46796610,1192155,deletion,10,,-1,-1,,,True,10_45604455,494,10_45604455_494,10_45604455_494
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,46739298,23100907,-23638391,translocation,21,,-1,-1,,,True,10_46739298,495,10_46739298_495,10_46739298_495
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr10,47697316,36284764,-11412552,translocation,21,,-1,-1,,,True,10_47697316,496,10_47697316_496,10_47697316_496
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr11,106409886,106413302,3416,deletion,11,,-1,-1,,,True,11_106409886,498,11_106409886_498,11_106409886_498
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr12,66057592,78188626,12131034,translocation,8,,-1,-1,,,True,12_66057592,450,12_66057592_450,12_66057592_450
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr12,66057592,25836891,-40220701,translocation,2,,-1,-1,,,True,12_66057592,55,12_66057592_55,12_66057592_55
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,16312012,33838648,17526636,translocation,14,,-1,-1,,,True,13_16312012,502,13_16312012_502,13_16312012_502
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,16576276,10422013,-6154263,translocation,21,,-1,-1,,,True,13_16576276,501,13_16576276_501,13_16576276_501
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,27214750,38198949,10984199,deletion,13,UTRintron,2,5,LINC02340,ENST00000620494,True,13_27214750,503,13_27214750_503,13_27214750_503
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,27380110,38223797,10843687,tandem-duplication,13,,-1,-1,,,True,13_27380110,504,13_27380110_504,13_27380110_504
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,29179483,46188227,17008744,inversion,13,intron,5,16,MTUS2,ENST00000612955,True,13_29179483,505,13_29179483_505,13_29179483_505
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,30696215,38777503,8081288,tandem-duplication,13,,-1,-1,,,True,13_30696215,506,13_30696215_506,13_30696215_506
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,33037529,33871497,833968,inversion,13,intron,1,5,KL,ENST00000380099,True,13_33037529,507,13_33037529_507,13_33037529_507
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,33863190,46036219,12173029,inversion,13,intron,8,9,RFC3,ENST00000434425,True,13_33863190,508,13_33863190_508,13_33863190_508
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,33872459,46065647,12193188,tandem-duplication,13,intron,8,9,RFC3,ENST00000434425,True,13_33872459,509,13_33872459_509,13_33872459_509
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,38198940,46066520,7867580,deletion,13,,-1,-1,,,True,13_38198940,510,13_38198940_510,13_38198940_510
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,56532480,56699569,167089,deletion,13,,-1,-1,,,True,13_56532480,511,13_56532480_511,13_56532480_511
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,65558402,65571455,13053,tandem-duplication,13,,-1,-1,,,True,13_65558402,512,13_65558402_512,13_65558402_512
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,83680437,84678910,998473,deletion,13,,-1,-1,,,True,13_83680437,513,13_83680437_513,13_83680437_513
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr13,112085555,112565956,480401,deletion,13,,-1,-1,,,True,13_112085555,514,13_112085555_514,13_112085555_514
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,49109723,52098435,2988712,deletion,14,,-1,-1,,,True,14_49109723,515,14_49109723_515,14_49109723_515
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,49585817,49620671,34854,inversion,14,intron,2,3,RPS29,ENST00000396020,True,14_49585817,517,14_49585817_517,14_49585817_517
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,49595962,52117334,2521372,deletion,14,intron,1,3,RPS29,ENST00000557111,True,14_49595962,516,14_49595962_516,14_49595962_516
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,52117177,52166973,49796,inversion,14,UTRintron,2,3,LINC02319,ENST00000555852,True,14_52117177,518,14_52117177_518,14_52117177_518
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,77867282,78546081,678799,deletion,14,intron,4,11,ADCK1,ENST00000238561,True,14_77867282,519,14_77867282_519,14_77867282_519
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,82212902,72634067,-9578835,translocation,8,,-1,-1,,,True,14_82212902,448,14_82212902_448,14_82212902_448
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr14,82620861,72888739,-9732122,translocation,8,,-1,-1,,,True,14_82620861,449,14_82620861_449,14_82620861_449
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr15,36303723,36306296,2573,tandem-duplication,15,,-1,-1,,,True,15_36303723,521,15_36303723_521,15_36303723_521
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr15,86766812,86774261,7449,inversion,15,intron,21,23,AGBL1,ENST00000635782,True,15_86766812,522,15_86766812_522,15_86766812_522
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr15,86772376,87285698,513322,tandem-duplication,15,intron,21,23,AGBL1,ENST00000635782,True,15_86772376,523,15_86772376_523,15_86772376_523
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr15,86774273,87291331,517058,inversion,15,intron,21,23,AGBL1,ENST00000635782,True,15_86774273,524,15_86774273_524,15_86774273_524
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr16,67192850,67195182,2332,deletion,16,exon,2,10,E2F4,ENST00000379378,True,16_67192850,525,16_67192850_525,16_67192850_525
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr17,51002337,65734914,14732577,deletion,17,intron,12,30,SPAG9,ENST00000262013,True,17_51002337,526,17_51002337_526,17_51002337_526
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr18,108299,11322800,11214501,translocation,Y,,-1,-1,,,True,18_108299,528,18_108299_528,18_108299_528
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr18,50449703,52038400,1588697,deletion,18,,-1,-1,,,True,18_50449703,529,18_50449703_529,18_50449703_529
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr19,39064837,39065405,568,inversion,19,,-1,-1,,,True,19_39064837,531,19_39064837_531,19_39064837_531
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr19,50017527,231578946,181561419,translocation,2,5UTRintron,2,15,VRK3,ENST00000599538,True,19_50017527,406,19_50017527_406,19_50017527_406
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr20,4995713,5514950,519237,deletion,20,5UTRintron,1,17,SLC23A2,ENST00000379333,True,20_4995713,532,20_4995713_532,20_4995713_532
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr20,15213844,15661618,447774,deletion,20,5UTRintron,1,14,MACROD2,ENST00000402914,True,20_15213844,533,20_15213844_533,20_15213844_533
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr20,30936333,30936776,443,deletion,20,,-1,-1,,,True,20_30936333,536,20_30936333_536,20_30936333_536
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,9916087,25115519,15199432,inversion,21,,-1,-1,,,True,21_9916087,537,21_9916087_537,21_9916087_537
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,9954042,9956922,2880,deletion,21,,-1,-1,,,True,21_9954042,538,21_9954042_538,21_9954042_538
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,16051748,33593763,17542015,inversion,21,UTRintron,1,6,MIR99AHG,ENST00000635845,True,21_16051748,539,21_16051748_539,21_16051748_539
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,16051989,33422345,17370356,tandem-duplication,21,UTRintron,1,6,MIR99AHG,ENST00000635845,True,21_16051989,540,21_16051989_540,21_16051989_540
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,17390712,25140582,7749870,inversion,21,,-1,-1,,,True,21_17390712,541,21_17390712_541,21_17390712_541
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,17416036,38834099,21418063,tandem-duplication,21,,-1,-1,,,True,21_17416036,542,21_17416036_542,21_17416036_542
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,17416368,46311379,28895011,inversion,21,,-1,-1,,,True,21_17416368,543,21_17416368_543,21_17416368_543
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,17450065,46276457,28826392,deletion,21,,-1,-1,,,True,21_17450065,544,21_17450065_544,21_17450065_544
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,18087457,27642887,9555430,inversion,21,5UTRintron,2,7,CHODL,ENST00000400128,True,21_18087457,545,21_18087457_545,21_18087457_545
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,23048560,23051286,2726,deletion,21,,-1,-1,,,True,21_23048560,546,21_23048560_546,21_23048560_546
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,23104535,25895137,2790602,tandem-duplication,21,UTRintron,2,5,AP001116.1,ENST00000421604,True,21_23104535,547,21_23104535_547,21_23104535_547
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,28628457,45009591,16381134,inversion,21,UTRintron,1,5,AF165147.1,ENST00000433310,True,21_28628457,548,21_28628457_548,21_28628457_548
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,33543283,41688119,8144836,inversion,21,intron,1,12,SON,ENST00000356577,True,21_33543283,549,21_33543283_549,21_33543283_549
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr21,41714756,45123415,3408659,inversion,21,UTRintron,2,6,LINC00479,ENST00000412102,True,21_41714756,550,21_41714756_550,21_41714756_550
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chr22,28670132,137823625,109153493,translocation,5,intron,1,23,TTC28,ENST00000397906,True,22_28670132,440,22_28670132_440,22_28670132_440
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chrX,27158781,27619432,460651,deletion,X,UTRintron,1,2,AC112493.1,ENST00000609836,True,X_27158781,553,X_27158781_553,X_27158781_553
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chrX,29841607,30018549,176942,deletion,X,intron,6,11,IL1RAPL1,ENST00000378993,True,X_29841607,554,X_29841607_554,X_29841607_554
t6_PDAC_case6_S8,PDAC_case6_S8,case6_S8_PDAC,case6,case6_S8,PDAC,t6,chrX,90737985,90747036,9051,deletion,X,,-1,-1,,,True,X_90737985,555,X_90737985_555,X_90737985_555
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,22638564,22695414,56850,deletion,1,intron,2,3,C1QA,ENST00000374642,True,1_22638564,24,1_22638564_24,1_22638564_24
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,47292658,47616493,323835,deletion,1,intron,8,17,STIL,ENST00000371877,True,1_47292658,53,1_47292658_53,1_47292658_53
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,79930283,80356221,425938,deletion,1,,-1,-1,,,True,1_79930283,66,1_79930283_66,1_79930283_66
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,105608122,38489051,-67119071,translocation,2,UTRintron,1,6,LINC01676,ENST00000595309,True,1_105608122,87,1_105608122_87,1_105608122_87
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,105841274,38491125,-67350149,translocation,2,,-1,-1,,,True,1_105841274,88,1_105841274_88,1_105841274_88
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174196959,174212659,15700,inversion,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174196959,120,1_174196959_120,1_174196959_120
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174197756,177007895,2810139,tandem-duplication,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174197756,121,1_174197756_121,1_174197756_121
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174212832,174426313,213481,tandem-duplication,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174212832,122,1_174212832_122,1_174212832_122
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174218719,174695168,476449,inversion,1,5UTRintron,1,21,RABGAP1L,ENST00000251507,True,1_174218719,123,1_174218719_123,1_174218719_123
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174420409,174682889,262480,tandem-duplication,1,intron,13,21,RABGAP1L,ENST00000251507,True,1_174420409,124,1_174420409_124,1_174420409_124
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174431810,178164135,3732325,tandem-duplication,1,intron,13,21,RABGAP1L,ENST00000251507,True,1_174431810,125,1_174431810_125,1_174431810_125
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,174684785,178215903,3531118,inversion,1,intron,15,21,RABGAP1L,ENST00000251507,True,1_174684785,126,1_174684785_126,1_174684785_126
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,175139482,178215997,3076515,tandem-duplication,1,intron,17,19,TNN,ENST00000239462,True,1_175139482,127,1_175139482_127,1_175139482_127
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr1,178163503,178164569,1066,inversion,1,intron,1,18,RASAL2,ENST00000367649,True,1_178163503,129,1_178163503_129,1_178163503_129
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,11789787,161132604,149342817,translocation,4,intron,13,22,LPIN1,ENST00000449576,True,2_11789787,189,2_11789787_189,2_11789787_189
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,29597892,29602954,5062,tandem-duplication,2,intron,3,29,ALK,ENST00000389048,True,2_29597892,205,2_29597892_205,2_29597892_205
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,38487611,38806477,318866,deletion,2,UTRintron,2,5,AC011247.1,ENST00000417039,True,2_38487611,2256,2_38487611_2256,2_38487611_2256
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,47369707,47468109,98402,deletion,2,intron,1,9,EPCAM,ENST00000263735,True,2_47369707,2257,2_47369707_2257,2_47369707_2257
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,119900105,120120788,220683,deletion,2,intron,9,27,PTPN4,ENST00000263708,True,2_119900105,2258,2_119900105_2258,2_119900105_2258
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,138103897,138180676,76779,deletion,2,UTRintron,1,3,LINC01832,ENST00000446520,True,2_138103897,2259,2_138103897_2259,2_138103897_2259
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr2,232048803,232806977,758174,deletion,2,intron,5,21,DIS3L2,ENST00000325385,True,2_232048803,2262,2_232048803_2262,2_232048803_2262
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr3,1885554,2020478,134924,deletion,3,,-1,-1,,,True,3_1885554,2264,3_1885554_2264,3_1885554_2264
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr3,10079953,11362621,1282668,deletion,3,intron,30,43,FANCD2,ENST00000287647,True,3_10079953,2265,3_10079953_2265,3_10079953_2265
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr3,60024719,60029363,4644,deletion,3,intron,5,9,FHIT,ENST00000468189,True,3_60024719,2266,3_60024719_2266,3_60024719_2266
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr3,114366324,114408982,42658,deletion,3,5UTRintron,8,10,ZBTB20,ENST00000357258,True,3_114366324,2278,3_114366324_2278,3_114366324_2278
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr3,137502862,2397088,-135105774,translocation,9,,-1,-1,,,True,3_137502862,2280,3_137502862_2280,3_137502862_2280
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr3,175384474,175404891,20417,tandem-duplication,3,intron,5,14,NAALADL2,ENST00000454872,True,3_175384474,2281,3_175384474_2281,3_175384474_2281
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,721108,729622,8514,deletion,4,5UTRintron,1,11,PCGF3,ENST00000362003,True,4_721108,2284,4_721108_2284,4_721108_2284
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,5508731,6313571,804840,deletion,4,,-1,-1,,,True,4_5508731,2285,4_5508731_2285,4_5508731_2285
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,90462868,90491661,28793,inversion,4,intron,4,11,CCSER1,ENST00000509176,True,4_90462868,2292,4_90462868_2292,4_90462868_2292
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,121795642,72894645,-48900997,translocation,8,,-1,-1,,,True,4_121795642,2293,4_121795642_2293,4_121795642_2293
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,134402403,134985677,583274,deletion,4,,-1,-1,,,True,4_134402403,2294,4_134402403_2294,4_134402403_2294
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,177223086,177244222,21136,inversion,4,,-1,-1,,,True,4_177223086,2296,4_177223086_2296,4_177223086_2296
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,183047461,183056467,9006,deletion,4,,-1,-1,,,True,4_183047461,2297,4_183047461_2297,4_183047461_2297
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr4,189928327,190007703,79376,deletion,4,UTRintron,2,3,FRG1-DT,ENST00000506276,True,4_189928327,2298,4_189928327_2298,4_189928327_2298
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,21816,24101,2285,inversion,5,,-1,-1,,,True,5_21816,2299,5_21816_2299,5_21816_2299
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,661769,664619,2850,deletion,5,3UTRexon,4,4,TPPP,ENST00000360578,True,5_661769,2300,5_661769_2300,5_661769_2300
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,661769,94136311,93474542,translocation,8,3UTRexon,4,4,TPPP,ENST00000360578,True,5_661769,2301,5_661769_2301,5_661769_2301
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,664819,94136311,93471492,translocation,8,3UTRexon,4,4,TPPP,ENST00000360578,True,5_664819,2302,5_664819_2302,5_664819_2302
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,1397738,3210572,1812834,deletion,5,intron,14,15,SLC6A3,ENST00000270349,True,5_1397738,2303,5_1397738_2303,5_1397738_2303
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,2551778,3031227,479449,inversion,5,,-1,-1,,,True,5_2551778,2304,5_2551778_2304,5_2551778_2304
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,3265802,129641112,126375310,translocation,8,,-1,-1,,,True,5_3265802,2306,5_3265802_2306,5_3265802_2306
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,3959647,5213592,1253945,deletion,5,,-1,-1,,,True,5_3959647,2307,5_3959647_2307,5_3959647_2307
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,5098129,126315939,121217810,translocation,8,,-1,-1,,,True,5_5098129,2308,5_5098129_2308,5_5098129_2308
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,5593637,5594905,1268,inversion,5,,-1,-1,,,True,5_5593637,2309,5_5593637_2309,5_5593637_2309
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,10705668,93663970,82958302,translocation,8,intron,2,3,DAP,ENST00000432074,True,5_10705668,2310,5_10705668_2310,5_10705668_2310
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,79280665,79295694,15029,deletion,5,intron,2,11,JMY,ENST00000396137,True,5_79280665,2312,5_79280665_2312,5_79280665_2312
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr5,100376306,100818210,441904,deletion,5,,-1,-1,,,True,5_100376306,2314,5_100376306_2314,5_100376306_2314
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr7,80376318,80710387,334069,deletion,7,5UTRintron,1,17,CD36,ENST00000435819,True,7_80376318,2323,7_80376318_2323,7_80376318_2323
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr7,110774687,111050909,276222,deletion,7,intron,5,6,IMMP2L,ENST00000405709,True,7_110774687,2324,7_110774687_2324,7_110774687_2324
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr7,125502649,125857559,354910,deletion,7,,-1,-1,,,True,7_125502649,2326,7_125502649_2326,7_125502649_2326
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr7,142795711,142796922,1211,deletion,7,,-1,-1,,,True,7_142795711,2330,7_142795711_2330,7_142795711_2330
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr7,151757288,152341495,584207,deletion,7,intron,3,16,PRKAG2,ENST00000287878,True,7_151757288,2335,7_151757288_2335,7_151757288_2335
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr7,158128069,158196127,68058,deletion,7,intron,9,22,PTPRN2,ENST00000389413,True,7_158128069,2338,7_158128069_2338,7_158128069_2338
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,48314690,64367506,16052816,tandem-duplication,8,,-1,-1,,,True,8_48314690,2339,8_48314690_2339,8_48314690_2339
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,49690209,57864192,8173983,deletion,8,,-1,-1,,,True,8_49690209,2340,8_49690209_2340,8_49690209_2340
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,58698627,62643958,3945331,deletion,8,,-1,-1,,,True,8_58698627,2341,8_58698627_2341,8_58698627_2341
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,62642803,62647082,4279,inversion,8,intron,3,7,NKAIN3,ENST00000523211,True,8_62642803,2342,8_62642803_2342,8_62642803_2342
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,91316596,114272997,22956401,inversion,8,5UTRintron,4,18,SLC26A7,ENST00000617078,True,8_91316596,2345,8_91316596_2345,8_91316596_2345
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,91824718,91934801,110083,deletion,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91824718,2346,8_91824718_2346,8_91824718_2346
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,91825406,125554250,33728844,tandem-duplication,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91825406,2348,8_91825406_2348,8_91825406_2348
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,91826988,124537259,32710271,deletion,8,UTRintron,1,4,AC103409.1,ENST00000521199,True,8_91826988,2347,8_91826988_2347,8_91826988_2347
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,93026326,93341838,315512,deletion,8,,-1,-1,,,True,8_93026326,2349,8_93026326_2349,8_93026326_2349
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,124237762,131247147,7009385,inversion,8,UTRintron,1,3,AC090921.1,ENST00000523703,True,8_124237762,2350,8_124237762_2350,8_124237762_2350
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,124397758,124957005,559247,tandem-duplication,8,,-1,-1,,,True,8_124397758,2351,8_124397758_2351,8_124397758_2351
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,124955770,124964606,8836,inversion,8,,-1,-1,,,True,8_124955770,2352,8_124955770_2352,8_124955770_2352
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,124955770,124963737,7967,inversion,8,,-1,-1,,,True,8_124955770,2354,8_124955770_2354,8_124955770_2354
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,124963749,132970381,8006632,inversion,8,,-1,-1,,,True,8_124963749,2353,8_124963749_2353,8_124963749_2353
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,125369472,133774652,8405180,tandem-duplication,8,,-1,-1,,,True,8_125369472,2355,8_125369472_2355,8_125369472_2355
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,131952091,131955013,2922,inversion,8,intron,5,23,EFR3A,ENST00000254624,True,8_131952091,2358,8_131952091_2358,8_131952091_2358
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,131971996,131974072,2076,inversion,8,intron,10,23,EFR3A,ENST00000254624,True,8_131971996,2357,8_131971996_2357,8_131971996_2357
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132102339,132351464,249125,deletion,8,intron,2,16,HHLA1,ENST00000414222,True,8_132102339,2359,8_132102339_2359,8_132102339_2359
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132190144,132854441,664297,deletion,8,intron,1,15,KCNQ3,ENST00000388996,True,8_132190144,2360,8_132190144_2360,8_132190144_2360
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132646493,133062400,415907,tandem-duplication,8,intron,3,12,LRRC6,ENST00000620350,True,8_132646493,2362,8_132646493_2362,8_132646493_2362
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132648235,133774728,1126493,inversion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648235,2363,8_132648235_2363,8_132648235_2363
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132648296,133774654,1126358,inversion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648296,2365,8_132648296_2365,8_132648296_2365
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132648298,133774921,1126623,tandem-duplication,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648298,2366,8_132648298_2366,8_132648298_2366
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,132648301,133774725,1126424,deletion,8,intron,3,12,LRRC6,ENST00000620350,True,8_132648301,2364,8_132648301_2364,8_132648301_2364
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,133062084,133775778,713694,inversion,8,intron,41,48,TG,ENST00000220616,True,8_133062084,2368,8_133062084_2368,8_133062084_2368
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,133062090,133774920,712830,deletion,8,intron,41,48,TG,ENST00000220616,True,8_133062090,2367,8_133062090_2367,8_133062090_2367
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,133347087,133768502,421415,deletion,8,,-1,-1,,,True,8_133347087,2369,8_133347087_2369,8_133347087_2369
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,133774920,133776205,1285,inversion,8,UTRintron,1,3,AC133634.1,ENST00000517695,True,8_133774920,2371,8_133774920_2371,8_133774920_2371
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr8,133775773,133776193,420,inversion,8,UTRintron,1,3,AC133634.1,ENST00000517695,True,8_133775773,2370,8_133775773_2370,8_133775773_2370
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr9,21934733,21955978,21245,inversion,9,3UTRexon,8,8,MTAP,ENST00000580900,True,9_21934733,2374,9_21934733_2374,9_21934733_2374
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr9,21939524,22023834,84310,inversion,9,,-1,-1,,,True,9_21939524,2375,9_21939524_2375,9_21939524_2375
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr9,38065156,38607445,542289,deletion,9,intron,1,6,SHB,ENST00000377707,True,9_38065156,2376,9_38065156_2376,9_38065156_2376
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,38713948,44908184,6194236,translocation,21,,-1,-1,,,True,10_38713948,2379,10_38713948_2379,10_38713948_2379
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,38714184,46308048,7593864,translocation,21,,-1,-1,,,True,10_38714184,2382,10_38714184_2382,10_38714184_2382
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,38714207,37433796,-1280411,translocation,21,,-1,-1,,,True,10_38714207,2381,10_38714207_2381,10_38714207_2381
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,38714368,36308646,-2405722,translocation,21,,-1,-1,,,True,10_38714368,2380,10_38714368_2380,10_38714368_2380
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,38863094,43904372,5041278,translocation,21,,-1,-1,,,True,10_38863094,2383,10_38863094_2383,10_38863094_2383
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,38866874,16559164,-22307710,translocation,21,,-1,-1,,,True,10_38866874,2384,10_38866874_2384,10_38866874_2384
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr10,45604455,46796611,1192156,deletion,10,,-1,-1,,,True,10_45604455,2386,10_45604455_2386,10_45604455_2386
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr11,106409886,106413302,3416,deletion,11,,-1,-1,,,True,11_106409886,2392,11_106409886_2392,11_106409886_2392
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr12,66057591,170372316,104314725,translocation,6,,-1,-1,,,True,12_66057591,2320,12_66057591_2320,12_66057591_2320
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,16312012,33838622,17526610,translocation,14,,-1,-1,,,True,13_16312012,2397,13_16312012_2397,13_16312012_2397
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,16576276,10422013,-6154263,translocation,21,,-1,-1,,,True,13_16576276,2398,13_16576276_2398,13_16576276_2398
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,27214750,38198949,10984199,deletion,13,UTRintron,2,5,LINC02340,ENST00000620494,True,13_27214750,2401,13_27214750_2401,13_27214750_2401
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,27380110,38223839,10843729,tandem-duplication,13,,-1,-1,,,True,13_27380110,2402,13_27380110_2402,13_27380110_2402
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,29179483,46188227,17008744,inversion,13,intron,5,16,MTUS2,ENST00000612955,True,13_29179483,2403,13_29179483_2403,13_29179483_2403
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,30696216,38777503,8081287,tandem-duplication,13,,-1,-1,,,True,13_30696216,2404,13_30696216_2404,13_30696216_2404
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,33037529,33871497,833968,inversion,13,intron,1,5,KL,ENST00000380099,True,13_33037529,2405,13_33037529_2405,13_33037529_2405
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,33863190,46036216,12173026,inversion,13,intron,8,9,RFC3,ENST00000434425,True,13_33863190,2406,13_33863190_2406,13_33863190_2406
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,38198940,46066520,7867580,deletion,13,,-1,-1,,,True,13_38198940,2408,13_38198940_2408,13_38198940_2408
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,56532480,56699569,167089,deletion,13,,-1,-1,,,True,13_56532480,2409,13_56532480_2409,13_56532480_2409
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,65558402,65571455,13053,tandem-duplication,13,,-1,-1,,,True,13_65558402,2410,13_65558402_2410,13_65558402_2410
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,95981481,20984949,-74996532,translocation,18,intron,10,39,UGGT2,ENST00000376747,True,13_95981481,2412,13_95981481_2412,13_95981481_2412
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr13,112085613,112565956,480343,deletion,13,,-1,-1,,,True,13_112085613,2413,13_112085613_2413,13_112085613_2413
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,49109723,52098435,2988712,deletion,14,,-1,-1,,,True,14_49109723,2414,14_49109723_2414,14_49109723_2414
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,49585817,49620671,34854,inversion,14,intron,2,3,RPS29,ENST00000396020,True,14_49585817,2415,14_49585817_2415,14_49585817_2415
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,49595962,52117334,2521372,deletion,14,intron,1,3,RPS29,ENST00000557111,True,14_49595962,2416,14_49595962_2416,14_49595962_2416
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,52117177,52166973,49796,inversion,14,UTRintron,2,3,LINC02319,ENST00000555852,True,14_52117177,2417,14_52117177_2417,14_52117177_2417
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,77867282,78546081,678799,deletion,14,intron,4,11,ADCK1,ENST00000238561,True,14_77867282,2418,14_77867282_2418,14_77867282_2418
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,82212902,72634067,-9578835,translocation,8,,-1,-1,,,True,14_82212902,2343,14_82212902_2343,14_82212902_2343
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,82620861,72888739,-9732122,translocation,8,,-1,-1,,,True,14_82620861,2344,14_82620861_2344,14_82620861_2344
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr14,94788235,151316684,56528449,translocation,7,,-1,-1,,,True,14_94788235,2334,14_94788235_2334,14_94788235_2334
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr15,36303723,36306296,2573,tandem-duplication,15,,-1,-1,,,True,15_36303723,2421,15_36303723_2421,15_36303723_2421
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr15,77618537,46596164,-31022373,translocation,18,intron,1,2,LINGO1,ENST00000355300,True,15_77618537,2422,15_77618537_2422,15_77618537_2422
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr15,86766812,86774261,7449,inversion,15,intron,21,23,AGBL1,ENST00000635782,True,15_86766812,2423,15_86766812_2423,15_86766812_2423
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr15,86774265,87291331,517066,inversion,15,intron,21,23,AGBL1,ENST00000635782,True,15_86774265,2424,15_86774265_2424,15_86774265_2424
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr16,67192852,67195182,2330,deletion,16,exon,2,10,E2F4,ENST00000379378,True,16_67192852,2427,16_67192852_2427,16_67192852_2427
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr17,64014307,232765903,168751596,translocation,2,5UTRintron,1,6,ICAM2,ENST00000412356,True,17_64014307,2263,17_64014307_2263,17_64014307_2263
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr18,50449703,52038400,1588697,deletion,18,,-1,-1,,,True,18_50449703,2428,18_50449703_2428,18_50449703_2428
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr18,78370115,78373174,3059,deletion,18,,-1,-1,,,True,18_78370115,2429,18_78370115_2429,18_78370115_2429
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr19,7124545,55495373,48370828,inversion,19,intron,16,21,INSR,ENST00000341500,True,19_7124545,2432,19_7124545_2432,19_7124545_2432
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr19,29232356,2867552,-26364804,translocation,5,,-1,-1,,,True,19_29232356,2305,19_29232356_2305,19_29232356_2305
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr19,39064837,39065405,568,inversion,19,,-1,-1,,,True,19_39064837,2433,19_39064837_2433,19_39064837_2433
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr20,4995713,5514950,519237,deletion,20,5UTRintron,1,17,SLC23A2,ENST00000379333,True,20_4995713,2436,20_4995713_2436,20_4995713_2436
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr20,15213844,15661618,447774,deletion,20,5UTRintron,1,14,MACROD2,ENST00000402914,True,20_15213844,2437,20_15213844_2437,20_15213844_2437
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr20,29892013,29893176,1163,deletion,20,,-1,-1,,,True,20_29892013,2438,20_29892013_2438,20_29892013_2438
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,9916082,25115504,15199422,inversion,21,,-1,-1,,,True,21_9916082,2443,21_9916082_2443,21_9916082_2443
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,9954042,9956922,2880,deletion,21,,-1,-1,,,True,21_9954042,2444,21_9954042_2444,21_9954042_2444
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,10421670,11025541,603871,translocation,22,,-1,-1,,,True,21_10421670,2445,21_10421670_2445,21_10421670_2445
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,16051748,33593763,17542015,inversion,21,UTRintron,1,6,MIR99AHG,ENST00000635845,True,21_16051748,2446,21_16051748_2446,21_16051748_2446
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,16051989,33422345,17370356,tandem-duplication,21,UTRintron,1,6,MIR99AHG,ENST00000635845,True,21_16051989,2447,21_16051989_2447,21_16051989_2447
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,17390712,25140582,7749870,inversion,21,,-1,-1,,,True,21_17390712,2448,21_17390712_2448,21_17390712_2448
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,17416036,38834099,21418063,tandem-duplication,21,,-1,-1,,,True,21_17416036,2449,21_17416036_2449,21_17416036_2449
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,17450065,46276464,28826399,deletion,21,,-1,-1,,,True,21_17450065,2450,21_17450065_2450,21_17450065_2450
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,18087457,27642887,9555430,inversion,21,5UTRintron,2,7,CHODL,ENST00000400128,True,21_18087457,2451,21_18087457_2451,21_18087457_2451
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,23048560,23051286,2726,deletion,21,,-1,-1,,,True,21_23048560,2452,21_23048560_2452,21_23048560_2452
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,23104535,25895137,2790602,tandem-duplication,21,UTRintron,2,5,AP001116.1,ENST00000421604,True,21_23104535,2453,21_23104535_2453,21_23104535_2453
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,28628457,45009591,16381134,inversion,21,UTRintron,1,5,AF165147.1,ENST00000433310,True,21_28628457,2454,21_28628457_2454,21_28628457_2454
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,33543283,41688119,8144836,inversion,21,intron,1,12,SON,ENST00000356577,True,21_33543283,2455,21_33543283_2455,21_33543283_2455
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr21,41714756,45123415,3408659,inversion,21,UTRintron,2,6,LINC00479,ENST00000412102,True,21_41714756,2456,21_41714756_2456,21_41714756_2456
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr22,11031171,904083,-10127088,translocation,X,,-1,-1,,,True,22_11031171,2457,22_11031171_2457,22_11031171_2457
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chr22,28670132,137823645,109153513,translocation,5,intron,1,23,TTC28,ENST00000397906,True,22_28670132,2315,22_28670132_2315,22_28670132_2315
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chrX,27158782,27619432,460650,deletion,X,UTRintron,1,2,AC112493.1,ENST00000609836,True,X_27158782,2461,X_27158782_2461,X_27158782_2461
t6_PDAC_case6_S9,PDAC_case6_S9,case6_S9_PDAC,case6,case6_S9,PDAC,t6,chrX,29841607,30018471,176864,deletion,X,intron,6,11,IL1RAPL1,ENST00000378993,True,X_29841607,2462,X_29841607_2462,X_29841607_2462
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr1,31452053,63510084,32058031,translocation,17,,-1,-1,,,True,1_31452053,20,1_31452053_20,1_31452053_20
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,13272205,13366951,94746,deletion,2,,-1,-1,,,True,2_13272205,78,2_13272205_78,2_13272205_78
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,101525430,101888969,363539,tandem-duplication,2,,-1,-1,,,True,2_101525430,1087,2_101525430_1087,2_101525430_1087
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,101568455,106964317,5395862,tandem-duplication,2,,-1,-1,,,True,2_101568455,1088,2_101568455_1088,2_101568455_1088
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,101878530,101893554,15024,inversion,2,intron,25,31,MAP4K4,ENST00000350878,True,2_101878530,1090,2_101878530_1090,2_101878530_1090
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,101910226,42707018,-59203208,translocation,8,,-1,-1,,,True,2_101910226,1089,2_101910226_1089,2_101910226_1089
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,102583386,104952281,2368895,inversion,2,,-1,-1,,,True,2_102583386,1092,2_102583386_1092,2_102583386_1092
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,104559422,83124396,-21435026,translocation,8,,-1,-1,,,True,2_104559422,1093,2_104559422_1093,2_104559422_1093
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,104955198,105650445,695247,inversion,2,,-1,-1,,,True,2_104955198,1094,2_104955198_1094,2_104955198_1094
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,104957558,43278292,-61679266,translocation,8,,-1,-1,,,True,2_104957558,1095,2_104957558_1095,2_104957558_1095
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,105791813,43110151,-62681662,translocation,8,5UTRintron,1,5,NCK2,ENST00000233154,True,2_105791813,1096,2_105791813_1096,2_105791813_1096
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,105791819,43045109,-62746710,translocation,8,5UTRintron,1,5,NCK2,ENST00000233154,True,2_105791819,1097,2_105791819_1097,2_105791819_1097
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,106031248,41995692,-64035556,translocation,8,,-1,-1,,,True,2_106031248,1098,2_106031248_1098,2_106031248_1098
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,107014312,39689569,-67324743,translocation,8,,-1,-1,,,True,2_107014312,1099,2_107014312_1099,2_107014312_1099
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr2,143046626,82306845,-60739781,translocation,6,3UTRexon,14,14,KYNU,ENST00000264170,True,2_143046626,1102,2_143046626_1102,2_143046626_1102
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr3,61226011,61279490,53479,inversion,3,5UTRintron,1,10,FHIT,ENST00000492590,True,3_61226011,1107,3_61226011_1107,3_61226011_1107
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr5,41551201,41644521,93320,deletion,5,,-1,-1,,,True,5_41551201,1194,5_41551201_1194,5_41551201_1194
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,35490747,158778124,123287377,tandem-duplication,6,5UTRintron,1,13,TEAD3,ENST00000338863,True,6_35490747,1201,6_35490747_1201,6_35490747_1201
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,74380352,79846704,5466352,inversion,6,UTRintron,2,4,AL357507.1,ENST00000435946,True,6_74380352,1209,6_74380352_1209,6_74380352_1209
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,103651046,145161016,41509970,tandem-duplication,6,,-1,-1,,,True,6_103651046,1212,6_103651046_1212,6_103651046_1212
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,111366717,120574914,9208197,deletion,6,intron,15,33,REV3L,ENST00000358835,True,6_111366717,1213,6_111366717_1213,6_111366717_1213
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,130633035,135692369,5059334,inversion,6,,-1,-1,,,True,6_130633035,1214,6_130633035_1214,6_130633035_1214
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,134657651,135541307,883656,tandem-duplication,6,UTRintron,1,3,AL078590.3,ENST00000434593,True,6_134657651,1215,6_134657651_1215,6_134657651_1215
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,134882705,134886268,3563,deletion,6,,-1,-1,,,True,6_134882705,1216,6_134882705_1216,6_134882705_1216
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr6,162141855,162147560,5705,deletion,6,intron,4,12,PRKN,ENST00000366898,True,6_162141855,1219,6_162141855_1219,6_162141855_1219
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr7,142824230,132058072,-10766158,translocation,X,,-1,-1,,,True,7_142824230,1236,7_142824230_1236,7_142824230_1236
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,40616625,43842278,3225653,inversion,8,intron,5,7,ZMAT4,ENST00000297737,True,8_40616625,1238,8_40616625_1238,8_40616625_1238
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,41678827,42044437,365610,inversion,8,intron,37,42,ANK1,ENST00000347528,True,8_41678827,1239,8_41678827_1239,8_41678827_1239
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,41894379,83159807,41265428,deletion,8,intron,1,43,ANK1,ENST00000265709,True,8_41894379,1240,8_41894379_1240,8_41894379_1240
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,41895222,42509522,614300,inversion,8,intron,1,43,ANK1,ENST00000265709,True,8_41895222,1241,8_41895222_1241,8_41895222_1241
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,42066384,42481805,415421,inversion,8,,-1,-1,,,True,8_42066384,1242,8_42066384_1242,8_42066384_1242
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,42744642,42784444,39802,deletion,8,,-1,-1,,,True,8_42744642,1243,8_42744642_1243,8_42744642_1243
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,42883820,43194402,310582,deletion,8,5UTRintron,2,7,RNF170,ENST00000526349,True,8_42883820,1244,8_42883820_1244,8_42883820_1244
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,42984901,43073901,89000,tandem-duplication,8,intron,14,22,HOOK3,ENST00000307602,True,8_42984901,1245,8_42984901_1245,8_42984901_1245
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,42984903,43110335,125432,inversion,8,intron,14,22,HOOK3,ENST00000307602,True,8_42984903,1248,8_42984903_1248,8_42984903_1248
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,42985077,43044610,59533,deletion,8,intron,14,22,HOOK3,ENST00000307602,True,8_42985077,1247,8_42985077_1247,8_42985077_1247
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,43045107,43073901,28794,tandem-duplication,8,,-1,-1,,,True,8_43045107,1249,8_43045107_1249,8_43045107_1249
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,43045107,43110158,65051,inversion,8,,-1,-1,,,True,8_43045107,1251,8_43045107_1251,8_43045107_1251
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,43046251,43072294,26043,deletion,8,,-1,-1,,,True,8_43046251,1250,8_43046251_1250,8_43046251_1250
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,43074229,43110925,36696,tandem-duplication,8,intron,5,9,FNTA,ENST00000302279,True,8_43074229,1252,8_43074229_1252,8_43074229_1252
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,83115983,83149751,33768,inversion,8,,-1,-1,,,True,8_83115983,1258,8_83115983_1258,8_83115983_1258
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr8,94553240,97287503,2734263,deletion,8,intron,1,24,VIRMA,ENST00000297591,True,8_94553240,1259,8_94553240_1259,8_94553240_1259
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr10,38525885,38526901,1016,deletion,10,,-1,-1,,,True,10_38525885,1271,10_38525885_1271,10_38525885_1271
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr11,1078719,1079776,1057,deletion,11,,-1,-1,,,True,11_1078719,1279,11_1078719_1279,11_1078719_1279
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr11,2914674,120652449,117737775,translocation,2,intron,5,11,SLC22A18,ENST00000380574,True,11_2914674,1100,11_2914674_1100,11_2914674_1100
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr11,54561224,54635239,74015,inversion,11,,-1,-1,,,True,11_54561224,1280,11_54561224_1280,11_54561224_1280
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr11,59166545,59167424,879,inversion,11,,-1,-1,,,True,11_59166545,1281,11_59166545_1281,11_59166545_1281
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,56192,271637,215445,inversion,12,,-1,-1,,,True,12_56192,1285,12_56192_1285,12_56192_1285
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,67884,12324378,12256494,deletion,12,intron,1,14,IQSEC3,ENST00000538872,True,12_67884,1284,12_67884_1284,12_67884_1284
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,235318,533355,298037,tandem-duplication,12,intron,6,15,SLC6A13,ENST00000343164,True,12_235318,1286,12_235318_1286,12_235318_1286
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,305560,12311996,12006436,inversion,12,intron,24,28,KDM5A,ENST00000399788,True,12_305560,1287,12_305560_1287,12_305560_1287
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,408147,430731,22584,tandem-duplication,12,5UTRintron,1,11,CCDC77,ENST00000540180,True,12_408147,1288,12_408147_1288,12_408147_1288
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,430075,1777906,1347831,deletion,12,intron,6,13,CCDC77,ENST00000239830,True,12_430075,1289,12_430075_1289,12_430075_1289
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,430165,1298980,868815,inversion,12,intron,6,13,CCDC77,ENST00000239830,True,12_430165,1290,12_430165_1290,12_430165_1290
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,1217278,11900025,10682747,tandem-duplication,12,intron,11,18,ERC1,ENST00000589028,True,12_1217278,1291,12_1217278_1291,12_1217278_1291
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,1817414,1818251,837,inversion,12,intron,26,38,CACNA2D4,ENST00000382722,True,12_1817414,1292,12_1817414_1292,12_1817414_1292
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,4423949,4424319,370,inversion,12,,-1,-1,,,True,12_4423949,1294,12_4423949_1294,12_4423949_1294
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,8646506,11952717,3306211,deletion,12,3UTRexon,10,10,MFAP5,ENST00000359478,True,12_8646506,1296,12_8646506_1296,12_8646506_1296
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,11264063,11305876,41813,inversion,12,,-1,-1,,,True,12_11264063,1299,12_11264063_1299,12_11264063_1299
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,11508841,144676621,133167780,translocation,4,,-1,-1,,,True,12_11508841,1190,12_11508841_1190,12_11508841_1190
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,11508841,11509566,725,inversion,12,,-1,-1,,,True,12_11508841,1301,12_11508841_1301,12_11508841_1301
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,11509566,144676805,133167239,translocation,4,,-1,-1,,,True,12_11509566,1189,12_11509566_1189,12_11509566_1189
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,11588514,11616500,27986,inversion,12,UTRintron,2,3,LINC01252,ENST00000541162,True,12_11588514,1302,12_11588514_1302,12_11588514_1302
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12100818,12110543,9725,inversion,12,,-1,-1,,,True,12_12100818,1303,12_12100818_1303,12_12100818_1303
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12183460,12219270,35810,tandem-duplication,12,intron,5,23,LRP6,ENST00000261349,True,12_12183460,1304,12_12183460_1304,12_12183460_1304
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12187046,12197142,10096,inversion,12,exon,4,23,LRP6,ENST00000261349,True,12_12187046,1305,12_12187046_1305,12_12187046_1305
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12197122,12222666,25544,deletion,12,intron,3,23,LRP6,ENST00000261349,True,12_12197122,1306,12_12197122_1306,12_12197122_1306
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12215734,12246023,30289,deletion,12,intron,2,23,LRP6,ENST00000261349,True,12_12215734,1307,12_12215734_1307,12_12215734_1307
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12255233,12269743,14510,inversion,12,intron,1,23,LRP6,ENST00000261349,True,12_12255233,1310,12_12255233_1310,12_12255233_1310
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12409519,12436314,26795,inversion,12,intron,2,4,BORCS5,ENST00000542728,True,12_12409519,1312,12_12409519_1312,12_12409519_1312
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12415441,9703186,-2712255,translocation,4,intron,2,4,BORCS5,ENST00000314565,True,12_12415441,1133,12_12415441_1133,12_12415441_1133
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12418916,68283216,55864300,translocation,5,intron,2,4,BORCS5,ENST00000314565,True,12_12418916,1196,12_12418916_1196,12_12418916_1196
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,12496808,12497814,1006,inversion,12,intron,4,7,DUSP16,ENST00000298573,True,12_12496808,1313,12_12496808_1313,12_12496808_1313
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr12,94926965,41736138,-53190827,translocation,21,,-1,-1,,,True,12_94926965,1319,12_94926965_1319,12_94926965_1319
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr13,78659154,146270972,67611818,translocation,6,5UTRexon,1,6,RNF219,ENST00000282003,True,13_78659154,1217,13_78659154_1217,13_78659154_1217
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,21346085,21355207,9122,inversion,14,intron,22,24,RPGRIP1,ENST00000400017,True,14_21346085,1325,14_21346085_1325,14_21346085_1325
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,23825190,23947401,122211,tandem-duplication,14,,-1,-1,,,True,14_23825190,1327,14_23825190_1327,14_23825190_1327
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,24161358,96761464,72600106,inversion,14,5UTRintron,1,9,IRF9,ENST00000396864,True,14_24161358,1328,14_24161358_1328,14_24161358_1328
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,24162031,100137167,75975136,inversion,14,5UTRintron,1,9,IRF9,ENST00000396864,True,14_24162031,1329,14_24162031_1329,14_24162031_1329
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,30926001,52197580,21271579,deletion,14,intron,8,18,STRN3,ENST00000357479,True,14_30926001,1330,14_30926001_1330,14_30926001_1330
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,34446627,34456570,9943,tandem-duplication,14,intron,1,2,SPTSSA,ENST00000298130,True,14_34446627,1332,14_34446627_1332,14_34446627_1332
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,34455491,102146287,67690796,inversion,14,intron,1,2,SPTSSA,ENST00000298130,True,14_34455491,1333,14_34455491_1333,14_34455491_1333
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35501309,100136111,64634802,tandem-duplication,14,,-1,-1,,,True,14_35501309,1335,14_35501309_1335,14_35501309_1335
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35504840,36627414,1122574,inversion,14,,-1,-1,,,True,14_35504840,1334,14_35504840_1334,14_35504840_1334
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35770440,106295395,70524955,inversion,14,intron,4,40,RALGAPA1,ENST00000307138,True,14_35770440,1337,14_35770440_1337,14_35770440_1337
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35770715,35996238,225523,inversion,14,intron,4,40,RALGAPA1,ENST00000307138,True,14_35770715,1336,14_35770715_1336,14_35770715_1336
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35777915,36374729,596814,inversion,14,intron,1,40,RALGAPA1,ENST00000307138,True,14_35777915,1338,14_35777915_1338,14_35777915_1338
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35988095,49411401,13423306,deletion,14,,-1,-1,,,True,14_35988095,1339,14_35988095_1339,14_35988095_1339
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,35989072,54380880,18391808,tandem-duplication,14,,-1,-1,,,True,14_35989072,1340,14_35989072_1340,14_35989072_1340
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,36301830,53023522,16721692,inversion,14,intron,7,9,MBIP,ENST00000416007,True,14_36301830,1341,14_36301830_1341,14_36301830_1341
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,36302285,54357497,18055212,inversion,14,intron,7,9,MBIP,ENST00000416007,True,14_36302285,1342,14_36302285_1342,14_36302285_1342
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,36338941,50546589,14207648,tandem-duplication,14,,-1,-1,,,True,14_36338941,1344,14_36338941_1344,14_36338941_1344
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,36345206,67730184,31384978,inversion,14,,-1,-1,,,True,14_36345206,1343,14_36345206_1343,14_36345206_1343
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,36622280,100138351,63516071,tandem-duplication,14,,-1,-1,,,True,14_36622280,1345,14_36622280_1345,14_36622280_1345
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,48935254,52203938,3268684,tandem-duplication,14,,-1,-1,,,True,14_48935254,1347,14_48935254_1347,14_48935254_1347
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,48938653,87305786,38367133,inversion,14,,-1,-1,,,True,14_48938653,1348,14_48938653_1348,14_48938653_1348
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,48938986,102094104,53155118,tandem-duplication,14,,-1,-1,,,True,14_48938986,1349,14_48938986_1349,14_48938986_1349
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,49423139,102093852,52670713,deletion,14,,-1,-1,,,True,14_49423139,1350,14_49423139_1350,14_49423139_1350
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,50546599,50547024,425,inversion,14,5UTRintron,1,14,ATL1,ENST00000441560,True,14_50546599,1352,14_50546599_1352,14_50546599_1352
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,50547286,75330318,24783032,deletion,14,5UTRintron,1,14,ATL1,ENST00000441560,True,14_50547286,1351,14_50547286_1351,14_50547286_1351
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,52202879,91051618,38848739,tandem-duplication,14,,-1,-1,,,True,14_52202879,1353,14_52202879_1353,14_52202879_1353
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,54059555,87232885,33173330,inversion,14,,-1,-1,,,True,14_54059555,1355,14_54059555_1355,14_54059555_1355
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,54060202,55041587,981385,deletion,14,,-1,-1,,,True,14_54060202,1354,14_54060202_1354,14_54060202_1354
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,54350256,61310474,6960218,inversion,14,,-1,-1,,,True,14_54350256,1356,14_54350256_1356,14_54350256_1356
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,54350256,93164444,38814188,inversion,14,,-1,-1,,,True,14_54350256,1357,14_54350256_1357,14_54350256_1357
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,54378963,64239627,9860664,tandem-duplication,14,,-1,-1,,,True,14_54378963,1358,14_54378963_1358,14_54378963_1358
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,54378963,55049203,670240,inversion,14,,-1,-1,,,True,14_54378963,1359,14_54378963_1359,14_54378963_1359
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,55045346,91051268,36005922,deletion,14,3UTRexon,2,2,SOCS4,ENST00000395472,True,14_55045346,1360,14_55045346_1360,14_55045346_1360
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,55049384,64239627,9190243,inversion,14,3UTRexon,2,2,SOCS4,ENST00000395472,True,14_55049384,1361,14_55049384_1361,14_55049384_1361
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,61307333,61410866,103533,tandem-duplication,14,5UTRintron,1,4,PRKCH,ENST00000555185,True,14_61307333,1363,14_61307333_1363,14_61307333_1363
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,61310667,93164444,31853777,deletion,14,5UTRintron,1,4,PRKCH,ENST00000555185,True,14_61310667,1362,14_61310667_1362,14_61310667_1362
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,67729892,102092775,34362883,inversion,14,intron,8,9,RDH12,ENST00000551171,True,14_67729892,1364,14_67729892_1364,14_67729892_1364
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,79855999,96755351,16899352,inversion,14,intron,19,20,NRXN3,ENST00000635466,True,14_79855999,1365,14_79855999_1365,14_79855999_1365
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,90276489,91044727,768238,inversion,14,3UTRexon,14,14,NRDE2,ENST00000354366,True,14_90276489,1367,14_90276489_1367,14_90276489_1367
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,90312317,91053157,740840,inversion,14,intron,4,14,NRDE2,ENST00000354366,True,14_90312317,1366,14_90312317_1366,14_90312317_1366
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,91225895,50449867,-40776028,translocation,18,,-1,-1,,,True,14_91225895,1369,14_91225895_1369,14_91225895_1369
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,91263609,99861581,8597972,inversion,14,,-1,-1,,,True,14_91263609,1368,14_91263609_1368,14_91263609_1368
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,99855556,99915856,60300,tandem-duplication,14,intron,2,22,EML1,ENST00000262233,True,14_99855556,1370,14_99855556_1370,14_99855556_1370
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr14,99912427,102146287,2233860,tandem-duplication,14,intron,13,22,EML1,ENST00000262233,True,14_99912427,1371,14_99912427_1371,14_99912427_1371
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr17,29363045,46178439,16815394,deletion,17,UTRintron,1,2,AC068025.2,ENST00000584958,True,17_29363045,1396,17_29363045_1396,17_29363045_1396
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr18,49870179,85845581,35975402,translocation,3,intron,27,40,MYO5B,ENST00000285039,True,18_49870179,1110,18_49870179_1110,18_49870179_1110
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr18,70309038,70372634,63596,deletion,18,5UTRintron,1,2,SOCS6,ENST00000397942,True,18_70309038,1400,18_70309038_1400,18_70309038_1400
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chr19,33757594,49200475,15442881,translocation,3,intron,2,4,CHST8,ENST00000262622,True,19_33757594,1106,19_33757594_1106,19_33757594_1106
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chrX,1142769,1143773,1004,deletion,X,,-1,-1,,,True,X_1142769,1432,X_1142769_1432,X_1142769_1432
t3_IPMN_HGD_case7_S1,IPMN_HGD_case7_S1,case7_S1_IPMN_HGD,case7,case7_S1,IPMN_HGD,t3,chrX,121582439,132052493,10470054,inversion,X,,-1,-1,,,True,X_121582439,1434,X_121582439_1434,X_121582439_1434
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,36292637,36297726,5089,deletion,1,exon,7,12,THRAP3,ENST00000354618,True,1_36292637,52,1_36292637_52,1_36292637_52
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,52697596,52710312,12716,deletion,1,intron,1,3,COA7,ENST00000371538,True,1_52697596,69,1_52697596_69,1_52697596_69
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,52698776,52710643,11867,tandem-duplication,1,,-1,-1,,,True,1_52698776,71,1_52698776_71,1_52698776_71
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,52710285,52711828,1543,deletion,1,,-1,-1,,,True,1_52710285,70,1_52710285_70,1_52710285_70
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,125081601,125157426,75825,tandem-duplication,1,,-1,-1,,,True,1_125081601,131,1_125081601_131,1_125081601_131
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,144102677,144103896,1219,deletion,1,,-1,-1,,,True,1_144102677,136,1_144102677_136,1_144102677_136
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,167990037,167992593,2556,deletion,1,intron,4,21,DCAF6,ENST00000432587,True,1_167990037,159,1_167990037_159,1_167990037_159
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,198192870,198200935,8065,inversion,1,5UTRintron,1,10,NEK7,ENST00000367385,True,1_198192870,181,1_198192870_181,1_198192870_181
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr1,198192874,198195549,2675,deletion,1,5UTRintron,1,10,NEK7,ENST00000367385,True,1_198192874,182,1_198192874_182,1_198192874_182
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,13272205,13366951,94746,deletion,2,,-1,-1,,,True,2_13272205,260,2_13272205_260,2_13272205_260
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,20001173,20234447,233274,tandem-duplication,2,intron,4,8,MATN3,ENST00000407540,True,2_20001173,266,2_20001173_266,2_20001173_266
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,42156127,42158658,2531,inversion,2,,-1,-1,,,True,2_42156127,2483,2_42156127_2483,2_42156127_2483
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,42157806,42162777,4971,inversion,2,,-1,-1,,,True,2_42157806,2484,2_42157806_2484,2_42157806_2484
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,63185824,63189230,3406,deletion,2,intron,14,18,WDPCP,ENST00000272321,True,2_63185824,2486,2_63185824_2486,2_63185824_2486
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,84501617,49230630,-35270987,translocation,22,,-1,-1,,,True,2_84501617,2489,2_84501617_2489,2_84501617_2489
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,87438561,100449330,13010769,deletion,2,,-1,-1,,,True,2_87438561,2493,2_87438561_2493,2_87438561_2493
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,88108151,42296849,-45811302,translocation,8,intron,8,10,SMYD1,ENST00000419482,True,2_88108151,2494,2_88108151_2494,2_88108151_2494
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,88558595,41691357,-46867238,translocation,8,intron,16,17,EIF2AK3,ENST00000303236,True,2_88558595,2495,2_88558595_2495,2_88558595_2495
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,88999193,89035624,36431,deletion,2,,-1,-1,,,True,2_88999193,2496,2_88999193_2496,2_88999193_2496
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,89831634,89833259,1625,deletion,2,,-1,-1,,,True,2_89831634,2530,2_89831634_2530,2_89831634_2530
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,90011415,42569761,-47441654,translocation,8,,-1,-1,,,True,2_90011415,2555,2_90011415_2555,2_90011415_2555
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,90384142,90391907,7765,tandem-duplication,2,,-1,-1,,,True,2_90384142,2559,2_90384142_2559,2_90384142_2559
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,92735450,94142966,1407516,inversion,2,,-1,-1,,,True,2_92735450,2563,2_92735450_2563,2_92735450_2563
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,95300782,80226289,-15074493,translocation,6,intron,1,9,KCNIP3,ENST00000295225,True,2_95300782,2566,2_95300782_2566,2_95300782_2566
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,95300919,80225141,-15075778,translocation,6,intron,1,9,KCNIP3,ENST00000295225,True,2_95300919,2565,2_95300919_2565,2_95300919_2565
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,101525430,101888969,363539,tandem-duplication,2,,-1,-1,,,True,2_101525430,2567,2_101525430_2567,2_101525430_2567
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,101568455,106964317,5395862,tandem-duplication,2,,-1,-1,,,True,2_101568455,2568,2_101568455_2568,2_101568455_2568
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,101878530,101893554,15024,inversion,2,intron,25,31,MAP4K4,ENST00000350878,True,2_101878530,2570,2_101878530_2570,2_101878530_2570
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,101910226,42707018,-59203208,translocation,8,,-1,-1,,,True,2_101910226,2569,2_101910226_2569,2_101910226_2569
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,102583452,104952281,2368829,inversion,2,,-1,-1,,,True,2_102583452,2571,2_102583452_2571,2_102583452_2571
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,104305870,40819503,-63486367,translocation,8,,-1,-1,,,True,2_104305870,2572,2_104305870_2572,2_104305870_2572
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,104559422,83124396,-21435026,translocation,8,,-1,-1,,,True,2_104559422,2573,2_104559422_2573,2_104559422_2573
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,104871977,56848921,-48023056,translocation,Y,UTRintron,1,2,LINC01159,ENST00000433433,True,2_104871977,2576,2_104871977_2576,2_104871977_2576
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,104955203,105650446,695243,inversion,2,,-1,-1,,,True,2_104955203,2574,2_104955203_2574,2_104955203_2574
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,104957558,43278294,-61679264,translocation,8,,-1,-1,,,True,2_104957558,2575,2_104957558_2575,2_104957558_2575
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,106031248,41995840,-64035408,translocation,8,,-1,-1,,,True,2_106031248,2577,2_106031248_2577,2_106031248_2577
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,107014312,39689569,-67324743,translocation,8,,-1,-1,,,True,2_107014312,2578,2_107014312_2578,2_107014312_2578
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,112934720,113015804,81084,inversion,2,,-1,-1,,,True,2_112934720,2580,2_112934720_2580,2_112934720_2580
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,113013168,113043814,30646,inversion,2,,-1,-1,,,True,2_113013168,2579,2_113013168_2579,2_113013168_2579
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr2,239280860,239281514,654,deletion,2,intron,2,27,HDAC4,ENST00000345617,True,2_239280860,2585,2_239280860_2585,2_239280860_2585
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,57945244,123235365,65290121,translocation,8,,-1,-1,,,True,3_57945244,2592,3_57945244_2592,3_57945244_2592
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,57945459,123229142,65283683,translocation,8,,-1,-1,,,True,3_57945459,2591,3_57945459_2591,3_57945459_2591
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,116433403,116915880,482477,deletion,3,intron,1,7,LSAMP,ENST00000490035,True,3_116433403,2640,3_116433403_2640,3_116433403_2640
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,116564602,116816775,252173,deletion,3,intron,2,5,LSAMP,ENST00000474851,True,3_116564602,2641,3_116564602_2641,3_116564602_2641
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,116603104,116752670,149566,deletion,3,intron,2,5,LSAMP,ENST00000474851,True,3_116603104,2642,3_116603104_2642,3_116603104_2642
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,116612585,116613802,1217,deletion,3,intron,2,5,LSAMP,ENST00000474851,True,3_116612585,2643,3_116612585_2643,3_116612585_2643
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,117028016,117032579,4563,deletion,3,intron,1,5,LSAMP,ENST00000474851,True,3_117028016,2644,3_117028016_2644,3_117028016_2644
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr3,132298993,132482033,183040,tandem-duplication,3,,-1,-1,,,True,3_132298993,2645,3_132298993_2645,3_132298993_2645
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr4,14653,135090324,135075671,translocation,6,,-1,-1,,,True,4_14653,2661,4_14653_2661,4_14653_2661
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr4,49136096,49138029,1933,deletion,4,,-1,-1,,,True,4_49136096,2685,4_49136096_2685,4_49136096_2685
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr4,49632614,49635602,2988,tandem-duplication,4,,-1,-1,,,True,4_49632614,2708,4_49632614_2708,4_49632614_2708
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr4,91205195,91228615,23420,deletion,4,intron,10,11,CCSER1,ENST00000509176,True,4_91205195,2732,4_91205195_2732,4_91205195_2732
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr4,104453185,79180382,-25272803,translocation,5,,-1,-1,,,True,4_104453185,2736,4_104453185_2736,4_104453185_2736
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr5,71717899,71851140,133241,tandem-duplication,5,,-1,-1,,,True,5_71717899,2744,5_71717899_2744,5_71717899_2744
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,69565166,79881222,10316056,deletion,6,,-1,-1,,,True,6_69565166,2770,6_69565166_2770,6_69565166_2770
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,80090938,80092277,1339,inversion,6,,-1,-1,,,True,6_80090938,2772,6_80090938_2772,6_80090938_2772
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,80225141,80226289,1148,inversion,6,intron,8,10,BCKDHB,ENST00000320393,True,6_80225141,2773,6_80225141_2773,6_80225141_2773
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,134657651,135541307,883656,tandem-duplication,6,UTRintron,1,3,AL078590.3,ENST00000434593,True,6_134657651,2774,6_134657651_2774,6_134657651_2774
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,134679330,134826702,147372,inversion,6,,-1,-1,,,True,6_134679330,2775,6_134679330_2775,6_134679330_2775
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,134693416,135183396,489980,tandem-duplication,6,,-1,-1,,,True,6_134693416,2776,6_134693416_2776,6_134693416_2776
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,134778938,135231325,452387,deletion,6,,-1,-1,,,True,6_134778938,2778,6_134778938_2778,6_134778938_2778
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,134779632,134966812,187180,deletion,6,,-1,-1,,,True,6_134779632,2779,6_134779632_2779,6_134779632_2779
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,134950205,135346461,396256,tandem-duplication,6,,-1,-1,,,True,6_134950205,2786,6_134950205_2786,6_134950205_2786
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,135025560,135213790,188230,tandem-duplication,6,intron,4,18,HBS1L,ENST00000367837,True,6_135025560,2788,6_135025560_2788,6_135025560_2788
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,135094767,135218721,123954,inversion,6,intron,1,5,HBS1L,ENST00000529882,True,6_135094767,2791,6_135094767_2791,6_135094767_2791
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,135218635,135484872,266237,inversion,6,3UTRexon,16,16,MYB,ENST00000341911,True,6_135218635,2798,6_135218635_2798,6_135218635_2798
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,135218729,135486526,267797,deletion,6,3UTRexon,16,16,MYB,ENST00000341911,True,6_135218729,2797,6_135218729_2797,6_135218729_2797
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,135392062,135461478,69416,deletion,6,intron,21,27,AHI1,ENST00000367800,True,6_135392062,2800,6_135392062_2800,6_135392062_2800
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,135484825,135486490,1665,inversion,6,intron,3,27,AHI1,ENST00000367800,True,6_135484825,2802,6_135484825_2802,6_135484825_2802
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,162030415,162190276,159861,deletion,6,intron,5,12,PRKN,ENST00000366898,True,6_162030415,2807,6_162030415_2807,6_162030415_2807
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr6,167385534,167386781,1247,deletion,6,,-1,-1,,,True,6_167385534,2808,6_167385534_2808,6_167385534_2808
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr7,41907789,41912240,4451,tandem-duplication,7,,-1,-1,,,True,7_41907789,2814,7_41907789_2814,7_41907789_2814
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr7,80055810,80581565,525755,deletion,7,,-1,-1,,,True,7_80055810,2817,7_80055810_2817,7_80055810_2817
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr7,142824230,132058072,-10766158,translocation,X,,-1,-1,,,True,7_142824230,2828,7_142824230_2828,7_142824230_2828
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,40616625,43842276,3225651,inversion,8,intron,5,7,ZMAT4,ENST00000297737,True,8_40616625,2833,8_40616625_2833,8_40616625_2833
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,41678827,42044437,365610,inversion,8,intron,37,42,ANK1,ENST00000347528,True,8_41678827,2834,8_41678827_2834,8_41678827_2834
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,41894379,83159807,41265428,deletion,8,intron,1,43,ANK1,ENST00000265709,True,8_41894379,2835,8_41894379_2835,8_41894379_2835
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,41895222,42509522,614300,inversion,8,intron,1,43,ANK1,ENST00000265709,True,8_41895222,2836,8_41895222_2836,8_41895222_2836
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,42066384,42481805,415421,inversion,8,,-1,-1,,,True,8_42066384,2837,8_42066384_2837,8_42066384_2837
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,42574455,141051347,98476892,tandem-duplication,8,,-1,-1,,,True,8_42574455,2838,8_42574455_2838,8_42574455_2838
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,42744642,42784444,39802,deletion,8,,-1,-1,,,True,8_42744642,2839,8_42744642_2839,8_42744642_2839
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,42883820,43194402,310582,deletion,8,5UTRintron,2,7,RNF170,ENST00000526349,True,8_42883820,2840,8_42883820_2840,8_42883820_2840
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,43568386,43569355,969,inversion,8,,-1,-1,,,True,8_43568386,2848,8_43568386_2848,8_43568386_2848
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,83115983,83149751,33768,inversion,8,,-1,-1,,,True,8_83115983,2852,8_83115983_2852,8_83115983_2852
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,121713989,121714642,653,inversion,8,,-1,-1,,,True,8_121713989,2854,8_121713989_2854,8_121713989_2854
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,121716032,121719370,3338,deletion,8,,-1,-1,,,True,8_121716032,2855,8_121716032_2855,8_121716032_2855
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,122810632,123050185,239553,tandem-duplication,8,5UTRintron,1,4,ZHX2,ENST00000314393,True,8_122810632,2856,8_122810632_2856,8_122810632_2856
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,123229119,123235364,6245,inversion,8,intron,4,6,C8orf76,ENST00000276704,True,8_123229119,2857,8_123229119_2857,8_123229119_2857
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,123562364,123579439,17075,inversion,8,,-1,-1,,,True,8_123562364,2858,8_123562364_2858,8_123562364_2858
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,124022919,124023180,261,inversion,8,intron,17,41,FER1L6,ENST00000522917,True,8_124022919,2859,8_124022919_2859,8_124022919_2859
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr8,140919257,141050831,131574,deletion,8,5UTRintron,2,32,PTK2,ENST00000522684,True,8_140919257,2862,8_140919257_2862,8_140919257_2862
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr9,33124616,33181553,56937,tandem-duplication,9,intron,2,6,B4GALT1,ENST00000379731,True,9_33124616,2866,9_33124616_2866,9_33124616_2866
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr9,35778089,35786884,8795,deletion,9,UTRintron,1,3,AL133410.1,ENST00000431981,True,9_35778089,2867,9_35778089_2867,9_35778089_2867
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr9,96376042,96377144,1102,deletion,9,intron,1,12,SLC35D2,ENST00000253270,True,9_96376042,2870,9_96376042_2870,9_96376042_2870
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr10,66889666,67073463,183797,deletion,10,intron,7,18,CTNNA3,ENST00000433211,True,10_66889666,2883,10_66889666_2883,10_66889666_2883
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr10,94541421,94623489,82068,inversion,10,5UTRintron,1,20,HELLS,ENST00000239026,True,10_94541421,2884,10_94541421_2884,10_94541421_2884
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr10,94621920,94654820,32900,inversion,10,,-1,-1,,,True,10_94621920,2885,10_94621920_2885,10_94621920_2885
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr10,100336179,100436431,100252,tandem-duplication,10,,-1,-1,,,True,10_100336179,2886,10_100336179_2886,10_100336179_2886
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr11,2914674,120652449,117737775,translocation,2,intron,5,11,SLC22A18,ENST00000380574,True,11_2914674,2581,11_2914674_2581,11_2914674_2581
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr11,47206646,47208979,2333,deletion,11,,-1,-1,,,True,11_47206646,2890,11_47206646_2890,11_47206646_2890
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr11,66992995,67069598,76603,deletion,11,,-1,-1,,,True,11_66992995,2894,11_66992995_2894,11_66992995_2894
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr11,120911245,84501730,-36409515,translocation,2,intron,13,21,GRIK4,ENST00000527524,True,11_120911245,2488,11_120911245_2488,11_120911245_2488
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,3725713,9909955,6184242,inversion,12,5UTRintron,2,20,CRACR2A,ENST00000440314,True,12_3725713,2896,12_3725713_2896,12_3725713_2896
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,4322873,18080777,13757904,tandem-duplication,12,intron,1,6,TIGAR,ENST00000179259,True,12_4322873,2897,12_4322873_2897,12_4322873_2897
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,4322873,18080814,13757941,inversion,12,intron,1,6,TIGAR,ENST00000179259,True,12_4322873,2898,12_4322873_2898,12_4322873_2898
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,9221392,19637044,10415652,translocation,6,,-1,-1,,,True,12_9221392,2749,12_9221392_2749,12_9221392_2749
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,9221416,112324102,103102686,inversion,12,,-1,-1,,,True,12_9221416,2899,12_9221416_2899,12_9221416_2899
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,9403162,9407151,3989,tandem-duplication,12,,-1,-1,,,True,12_9403162,2900,12_9403162_2900,12_9403162_2900
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11259025,12768343,1509318,deletion,12,,-1,-1,,,True,12_11259025,2910,12_11259025_2910,12_11259025_2910
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11264063,11264919,856,inversion,12,,-1,-1,,,True,12_11264063,2911,12_11264063_2911,12_11264063_2911
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11264063,11305876,41813,inversion,12,,-1,-1,,,True,12_11264063,2912,12_11264063_2912,12_11264063_2912
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11287870,11292253,4383,inversion,12,,-1,-1,,,True,12_11287870,2914,12_11287870_2914,12_11287870_2914
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11378134,39861489,28483355,inversion,12,intron,2,5,PRB1,ENST00000546254,True,12_11378134,2915,12_11378134_2915,12_11378134_2915
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11664888,11674345,9457,inversion,12,intron,1,8,ETV6,ENST00000396373,True,12_11664888,2917,12_11664888_2917,12_11664888_2917
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,11783119,11796634,13515,inversion,12,intron,2,8,ETV6,ENST00000396373,True,12_11783119,2918,12_11783119_2918,12_11783119_2918
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,12187046,12197142,10096,inversion,12,exon,4,23,LRP6,ENST00000261349,True,12_12187046,2919,12_12187046_2919,12_12187046_2919
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,12392047,184589968,172197921,translocation,4,intron,2,4,BORCS5,ENST00000314565,True,12_12392047,2738,12_12392047_2738,12_12392047_2738
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,12409519,12436314,26795,inversion,12,intron,2,4,BORCS5,ENST00000542728,True,12_12409519,2921,12_12409519_2921,12_12409519_2921
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,12415441,9703221,-2712220,translocation,4,intron,2,4,BORCS5,ENST00000314565,True,12_12415441,2663,12_12415441_2663,12_12415441_2663
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,12769231,12770779,1548,inversion,12,intron,1,2,APOLD1,ENST00000326765,True,12_12769231,2922,12_12769231_2922,12_12769231_2922
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,15320685,94564262,79243577,translocation,4,5UTRintron,2,4,RERG,ENST00000393736,True,12_15320685,2733,12_15320685_2733,12_15320685_2733
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,18080771,18080921,150,inversion,12,,-1,-1,,,True,12_18080771,2923,12_18080771_2923,12_18080771_2923
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,66057592,135108067,69050475,translocation,6,,-1,-1,,,True,12_66057592,2793,12_66057592_2793,12_66057592_2793
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,66057592,82384539,16326947,inversion,12,,-1,-1,,,True,12_66057592,2930,12_66057592_2930,12_66057592_2930
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,66057592,10692900,-55364692,translocation,21,,-1,-1,,,True,12_66057592,2931,12_66057592_2931,12_66057592_2931
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr12,120513233,120524536,11303,deletion,12,intron,3,7,COQ5,ENST00000288532,True,12_120513233,2934,12_120513233_2934,12_120513233_2934
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,47083817,48205233,1121416,inversion,13,,-1,-1,,,True,13_47083817,2944,13_47083817_2944,13_47083817_2944
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,48168997,48205170,36173,inversion,13,,-1,-1,,,True,13_48168997,2945,13_48168997_2945,13_48168997_2945
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,48170399,48172218,1819,inversion,13,,-1,-1,,,True,13_48170399,2946,13_48170399_2946,13_48170399_2946
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,48245111,48250899,5788,inversion,13,intron,1,6,ITM2B,ENST00000378565,True,13_48245111,2947,13_48245111_2947,13_48245111_2947
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,48372231,73032804,24660573,translocation,6,intron,11,27,RB1,ENST00000267163,True,13_48372231,2771,13_48372231_2771,13_48372231_2771
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,73143311,73281109,137798,tandem-duplication,13,,-1,-1,,,True,13_73143311,2948,13_73143311_2948,13_73143311_2948
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,73257838,73262834,4996,deletion,13,,-1,-1,,,True,13_73257838,2949,13_73257838_2949,13_73257838_2949
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr13,73312835,73495797,182962,tandem-duplication,13,,-1,-1,,,True,13_73312835,2950,13_73312835_2950,13_73312835_2950
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr14,77401184,77402846,1662,deletion,14,intron,5,6,NOXRED1,ENST00000380835,True,14_77401184,2954,14_77401184_2954,14_77401184_2954
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr15,67060978,67069965,8987,deletion,15,,-1,-1,,,True,15_67060978,2965,15_67060978_2965,15_67060978_2965
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr15,77019103,77035104,16001,inversion,15,intron,3,15,PSTPIP1,ENST00000558012,True,15_77019103,2966,15_77019103_2966,15_77019103_2966
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr16,11912360,11921907,9547,inversion,16,intron,1,15,GSPT1,ENST00000434724,True,16_11912360,2974,16_11912360_2974,16_11912360_2974
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr16,11912361,11917361,5000,inversion,16,intron,1,15,GSPT1,ENST00000434724,True,16_11912361,2973,16_11912361_2973,16_11912361_2973
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr16,72624127,38417731,-34206396,translocation,21,UTRintron,1,14,LINC01572,ENST00000624829,True,16_72624127,2986,16_72624127_2986,16_72624127_2986
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr17,58639527,58641238,1711,deletion,17,intron,2,33,TEX14,ENST00000389934,True,17_58639527,3006,17_58639527_3006,17_58639527_3006
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr18,109397,11313516,11204119,translocation,Y,,-1,-1,,,True,18_109397,3013,18_109397_3013,18_109397_3013
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr18,79619065,79620746,1681,deletion,18,,-1,-1,,,True,18_79619065,3020,18_79619065_3020,18_79619065_3020
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr19,17610425,17614906,4481,inversion,19,intron,42,44,UNC13A,ENST00000519716,True,19_17610425,3025,19_17610425_3025,19_17610425_3025
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr19,17613071,17614932,1861,inversion,19,intron,41,44,UNC13A,ENST00000519716,True,19_17613071,3026,19_17613071_3026,19_17613071_3026
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr19,19172187,19269051,96864,tandem-duplication,19,5UTRintron,3,10,BORCS8-MEF2B,ENST00000444486,True,19_19172187,3027,19_19172187_3027,19_19172187_3027
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr19,33757597,49200475,15442878,translocation,3,intron,2,4,CHST8,ENST00000262622,True,19_33757597,2589,19_33757597_2589,19_33757597_2589
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr21,10419633,43017338,32597705,translocation,8,,-1,-1,,,True,21_10419633,2841,21_10419633_2841,21_10419633_2841
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr21,35685567,35686132,565,inversion,21,5UTRintron,6,13,RUNX1,ENST00000475045,True,21_35685567,3055,21_35685567_3055,21_35685567_3055
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr21,39634507,39635397,890,inversion,21,5UTRintron,2,5,B3GALT5,ENST00000380620,True,21_39634507,3056,21_39634507_3056,21_39634507_3056
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr22,36340641,36376919,36278,tandem-duplication,22,intron,3,41,MYH9,ENST00000216181,True,22_36340641,3066,22_36340641_3066,22_36340641_3066
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chr22,36361841,36376044,14203,tandem-duplication,22,5UTRintron,1,41,MYH9,ENST00000216181,True,22_36361841,3067,22_36361841_3067,22_36361841_3067
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chrX,1855175,1858847,3672,deletion,X,,-1,-1,,,True,X_1855175,3070,X_1855175_3070,X_1855175_3070
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chrX,2631657,2632609,952,inversion,X,,-1,-1,,,True,X_2631657,3072,X_2631657_3072,X_2631657_3072
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chrX,62627548,62640341,12793,tandem-duplication,X,,-1,-1,,,True,X_62627548,3073,X_62627548_3073,X_62627548_3073
t4_IPMN_HGD_PDAC_case7_S4,IPMN_HGD_PDAC_case7_S4,case7_S4_IPMN_HGD_PDAC,case7,case7_S4,IPMN_HGD_PDAC,t4,chrX,121582439,132052493,10470054,inversion,X,,-1,-1,,,True,X_121582439,3075,X_121582439_3075,X_121582439_3075
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,36292637,36297726,5089,deletion,1,exon,7,12,THRAP3,ENST00000354618,True,1_36292637,45,1_36292637_45,1_36292637_45
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,52697594,52710312,12718,deletion,1,intron,1,3,COA7,ENST00000371538,True,1_52697594,61,1_52697594_61,1_52697594_61
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,52698776,52710643,11867,tandem-duplication,1,,-1,-1,,,True,1_52698776,62,1_52698776_62,1_52698776_62
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,52710236,52711828,1592,deletion,1,,-1,-1,,,True,1_52710236,63,1_52710236_63,1_52710236_63
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,151867559,84691100,-67176459,translocation,7,,-1,-1,,,True,1_151867559,98,1_151867559_98,1_151867559_98
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,167990039,167992593,2554,deletion,1,intron,4,21,DCAF6,ENST00000432587,True,1_167990039,107,1_167990039_107,1_167990039_107
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,198192874,198195549,2675,deletion,1,5UTRintron,1,10,NEK7,ENST00000367385,True,1_198192874,115,1_198192874_115,1_198192874_115
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,204181997,26627271,-177554726,translocation,15,5UTRintron,1,12,REN,ENST00000638118,True,1_204181997,117,1_204181997_117,1_204181997_117
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr1,238541654,32760930,-205780724,translocation,6,,-1,-1,,,True,1_238541654,133,1_238541654_133,1_238541654_133
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,13272205,13366951,94746,deletion,2,,-1,-1,,,True,2_13272205,147,2_13272205_147,2_13272205_147
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,20001173,20234447,233274,tandem-duplication,2,intron,4,8,MATN3,ENST00000407540,True,2_20001173,149,2_20001173_149,2_20001173_149
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,42156392,42158664,2272,inversion,2,,-1,-1,,,True,2_42156392,1753,2_42156392_1753,2_42156392_1753
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,42157806,42162778,4972,inversion,2,,-1,-1,,,True,2_42157806,1754,2_42157806_1754,2_42157806_1754
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,63185824,63189230,3406,deletion,2,intron,14,18,WDPCP,ENST00000272321,True,2_63185824,1755,2_63185824_1755,2_63185824_1755
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,87438561,100449330,13010769,deletion,2,,-1,-1,,,True,2_87438561,1757,2_87438561_1757,2_87438561_1757
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,88108151,42296850,-45811301,translocation,8,intron,8,10,SMYD1,ENST00000419482,True,2_88108151,1758,2_88108151_1758,2_88108151_1758
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,88558595,41691357,-46867238,translocation,8,intron,16,17,EIF2AK3,ENST00000303236,True,2_88558595,1759,2_88558595_1759,2_88558595_1759
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,90011415,42569761,-47441654,translocation,8,,-1,-1,,,True,2_90011415,1815,2_90011415_1815,2_90011415_1815
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,90383972,90391907,7935,tandem-duplication,2,,-1,-1,,,True,2_90383972,1818,2_90383972_1818,2_90383972_1818
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,92735450,94142966,1407516,inversion,2,,-1,-1,,,True,2_92735450,1820,2_92735450_1820,2_92735450_1820
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,95300782,80226289,-15074493,translocation,6,intron,1,9,KCNIP3,ENST00000295225,True,2_95300782,1822,2_95300782_1822,2_95300782_1822
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,95300919,80225141,-15075778,translocation,6,intron,1,9,KCNIP3,ENST00000295225,True,2_95300919,1821,2_95300919_1821,2_95300919_1821
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,101525430,101888969,363539,tandem-duplication,2,,-1,-1,,,True,2_101525430,1823,2_101525430_1823,2_101525430_1823
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,101568455,106964317,5395862,tandem-duplication,2,,-1,-1,,,True,2_101568455,1824,2_101568455_1824,2_101568455_1824
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,101878530,101893554,15024,inversion,2,intron,25,31,MAP4K4,ENST00000350878,True,2_101878530,1826,2_101878530_1826,2_101878530_1826
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,101910226,42707018,-59203208,translocation,8,,-1,-1,,,True,2_101910226,1825,2_101910226_1825,2_101910226_1825
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,102583386,104952281,2368895,inversion,2,,-1,-1,,,True,2_102583386,1827,2_102583386_1827,2_102583386_1827
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,104305870,40819503,-63486367,translocation,8,,-1,-1,,,True,2_104305870,1828,2_104305870_1828,2_104305870_1828
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,104559422,83124396,-21435026,translocation,8,,-1,-1,,,True,2_104559422,1829,2_104559422_1829,2_104559422_1829
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,104871977,56848921,-48023056,translocation,Y,UTRintron,1,2,LINC01159,ENST00000433433,True,2_104871977,1832,2_104871977_1832,2_104871977_1832
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,104955203,105650446,695243,inversion,2,,-1,-1,,,True,2_104955203,1830,2_104955203_1830,2_104955203_1830
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,104957558,43278292,-61679266,translocation,8,,-1,-1,,,True,2_104957558,1831,2_104957558_1831,2_104957558_1831
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,106031248,41995840,-64035408,translocation,8,,-1,-1,,,True,2_106031248,1833,2_106031248_1833,2_106031248_1833
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,107014312,39689569,-67324743,translocation,8,,-1,-1,,,True,2_107014312,1834,2_107014312_1834,2_107014312_1834
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,112934720,113015804,81084,inversion,2,,-1,-1,,,True,2_112934720,1835,2_112934720_1835,2_112934720_1835
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr2,113013229,113043852,30623,inversion,2,,-1,-1,,,True,2_113013229,1836,2_113013229_1836,2_113013229_1836
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,57945244,123235365,65290121,translocation,8,,-1,-1,,,True,3_57945244,1846,3_57945244_1846,3_57945244_1846
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,57945459,123229142,65283683,translocation,8,,-1,-1,,,True,3_57945459,1847,3_57945459_1847,3_57945459_1847
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,116433403,116915880,482477,deletion,3,intron,1,7,LSAMP,ENST00000490035,True,3_116433403,1874,3_116433403_1874,3_116433403_1874
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,116603104,116752670,149566,deletion,3,intron,2,5,LSAMP,ENST00000474851,True,3_116603104,1875,3_116603104_1875,3_116603104_1875
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,116612585,116613802,1217,deletion,3,intron,2,5,LSAMP,ENST00000474851,True,3_116612585,1876,3_116612585_1876,3_116612585_1876
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,117028012,117032579,4567,deletion,3,intron,1,5,LSAMP,ENST00000474851,True,3_117028012,1877,3_117028012_1877,3_117028012_1877
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,132298993,132482033,183040,tandem-duplication,3,,-1,-1,,,True,3_132298993,1879,3_132298993_1879,3_132298993_1879
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,195474937,91186101,-104288836,translocation,7,,-1,-1,,,True,3_195474937,1882,3_195474937_1882,3_195474937_1882
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr3,195782959,195783718,759,deletion,3,exon,2,25,MUC4,ENST00000463781,True,3_195782959,1885,3_195782959_1885,3_195782959_1885
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr4,6953612,52672314,45718702,translocation,6,intron,2,14,TBC1D14,ENST00000409757,True,4_6953612,1889,4_6953612_1889,4_6953612_1889
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr4,49136096,49138034,1938,deletion,4,,-1,-1,,,True,4_49136096,1914,4_49136096_1914,4_49136096_1914
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr4,49648763,49650779,2016,deletion,4,,-1,-1,,,True,4_49648763,1948,4_49648763_1948,4_49648763_1948
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr4,91205195,91228615,23420,deletion,4,intron,10,11,CCSER1,ENST00000509176,True,4_91205195,1956,4_91205195_1956,4_91205195_1956
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr4,136051639,136052795,1156,deletion,4,,-1,-1,,,True,4_136051639,1960,4_136051639_1960,4_136051639_1960
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,58681641,58976003,294362,tandem-duplication,6,,-1,-1,,,True,6_58681641,1981,6_58681641_1981,6_58681641_1981
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,69565166,79881222,10316056,deletion,6,,-1,-1,,,True,6_69565166,1982,6_69565166_1982,6_69565166_1982
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,80090938,80092277,1339,inversion,6,,-1,-1,,,True,6_80090938,1984,6_80090938_1984,6_80090938_1984
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,80225141,80226289,1148,inversion,6,intron,8,10,BCKDHB,ENST00000320393,True,6_80225141,1985,6_80225141_1985,6_80225141_1985
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,134657651,135541307,883656,tandem-duplication,6,UTRintron,1,3,AL078590.3,ENST00000434593,True,6_134657651,1986,6_134657651_1986,6_134657651_1986
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,134679330,134826702,147372,inversion,6,,-1,-1,,,True,6_134679330,1989,6_134679330_1989,6_134679330_1989
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,134693416,135183396,489980,tandem-duplication,6,,-1,-1,,,True,6_134693416,1992,6_134693416_1992,6_134693416_1992
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,134950205,135346461,396256,tandem-duplication,6,,-1,-1,,,True,6_134950205,2021,6_134950205_2021,6_134950205_2021
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,135094766,135218721,123955,inversion,6,intron,1,5,HBS1L,ENST00000529882,True,6_135094766,2031,6_135094766_2031,6_135094766_2031
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,135218635,135484830,266195,inversion,6,3UTRexon,16,16,MYB,ENST00000341911,True,6_135218635,2043,6_135218635_2043,6_135218635_2043
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,135218729,135486490,267761,deletion,6,3UTRexon,16,16,MYB,ENST00000341911,True,6_135218729,2042,6_135218729_2042,6_135218729_2042
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,135224594,135234291,9697,deletion,6,,-1,-1,,,True,6_135224594,2044,6_135224594_2044,6_135224594_2044
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,135484825,135486490,1665,inversion,6,intron,3,27,AHI1,ENST00000367800,True,6_135484825,2059,6_135484825_2059,6_135484825_2059
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,162030415,162190276,159861,deletion,6,intron,5,12,PRKN,ENST00000366898,True,6_162030415,2065,6_162030415_2065,6_162030415_2065
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr6,167385549,167386811,1262,deletion,6,,-1,-1,,,True,6_167385549,2066,6_167385549_2066,6_167385549_2066
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr7,41907789,41912240,4451,tandem-duplication,7,,-1,-1,,,True,7_41907789,2068,7_41907789_2068,7_41907789_2068
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr7,80055810,80581565,525755,deletion,7,,-1,-1,,,True,7_80055810,2075,7_80055810_2075,7_80055810_2075
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr7,142824230,132058072,-10766158,translocation,X,,-1,-1,,,True,7_142824230,2079,7_142824230_2079,7_142824230_2079
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr7,155259008,123670211,-31588797,translocation,8,,-1,-1,,,True,7_155259008,2083,7_155259008_2083,7_155259008_2083
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,40616625,43842276,3225651,inversion,8,intron,5,7,ZMAT4,ENST00000297737,True,8_40616625,2086,8_40616625_2086,8_40616625_2086
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,41678827,42044437,365610,inversion,8,intron,37,42,ANK1,ENST00000347528,True,8_41678827,2087,8_41678827_2087,8_41678827_2087
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,41894379,83159807,41265428,deletion,8,intron,1,43,ANK1,ENST00000265709,True,8_41894379,2088,8_41894379_2088,8_41894379_2088
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,41895222,42509522,614300,inversion,8,intron,1,43,ANK1,ENST00000265709,True,8_41895222,2089,8_41895222_2089,8_41895222_2089
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,42066384,42481805,415421,inversion,8,,-1,-1,,,True,8_42066384,2090,8_42066384_2090,8_42066384_2090
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,42574455,141051350,98476895,tandem-duplication,8,,-1,-1,,,True,8_42574455,2091,8_42574455_2091,8_42574455_2091
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,42744642,42784444,39802,deletion,8,,-1,-1,,,True,8_42744642,2092,8_42744642_2092,8_42744642_2092
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,42883820,43194402,310582,deletion,8,5UTRintron,2,7,RNF170,ENST00000526349,True,8_42883820,2093,8_42883820_2093,8_42883820_2093
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,43568386,43569355,969,inversion,8,,-1,-1,,,True,8_43568386,2099,8_43568386_2099,8_43568386_2099
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,83115983,83149751,33768,inversion,8,,-1,-1,,,True,8_83115983,2102,8_83115983_2102,8_83115983_2102
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,121713989,121714642,653,inversion,8,,-1,-1,,,True,8_121713989,2105,8_121713989_2105,8_121713989_2105
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,121716032,121719370,3338,deletion,8,,-1,-1,,,True,8_121716032,2104,8_121716032_2104,8_121716032_2104
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,122810632,123050185,239553,tandem-duplication,8,5UTRintron,1,4,ZHX2,ENST00000314393,True,8_122810632,2106,8_122810632_2106,8_122810632_2106
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,123229119,123235364,6245,inversion,8,intron,4,6,C8orf76,ENST00000276704,True,8_123229119,2107,8_123229119_2107,8_123229119_2107
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,123562364,123579439,17075,inversion,8,,-1,-1,,,True,8_123562364,2108,8_123562364_2108,8_123562364_2108
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,124022919,124023180,261,inversion,8,intron,17,41,FER1L6,ENST00000522917,True,8_124022919,2109,8_124022919_2109,8_124022919_2109
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr8,140919257,141050831,131574,deletion,8,5UTRintron,2,32,PTK2,ENST00000522684,True,8_140919257,2111,8_140919257_2111,8_140919257_2111
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr9,33124616,33181553,56937,tandem-duplication,9,intron,2,6,B4GALT1,ENST00000379731,True,9_33124616,2116,9_33124616_2116,9_33124616_2116
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr9,35778089,35786884,8795,deletion,9,UTRintron,1,3,AL133410.1,ENST00000431981,True,9_35778089,2117,9_35778089_2117,9_35778089_2117
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr10,66889666,67073463,183797,deletion,10,intron,7,18,CTNNA3,ENST00000433211,True,10_66889666,2127,10_66889666_2127,10_66889666_2127
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr10,94541421,94623489,82068,inversion,10,5UTRintron,1,20,HELLS,ENST00000239026,True,10_94541421,2128,10_94541421_2128,10_94541421_2128
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr10,94621920,94654820,32900,inversion,10,,-1,-1,,,True,10_94621920,2129,10_94621920_2129,10_94621920_2129
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr10,100336179,100436431,100252,tandem-duplication,10,,-1,-1,,,True,10_100336179,2130,10_100336179_2130,10_100336179_2130
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr11,2914674,120652449,117737775,translocation,2,intron,5,11,SLC22A18,ENST00000380574,True,11_2914674,1839,11_2914674_1839,11_2914674_1839
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr11,47206646,47208979,2333,deletion,11,,-1,-1,,,True,11_47206646,2132,11_47206646_2132,11_47206646_2132
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr11,66993007,67069598,76591,deletion,11,,-1,-1,,,True,11_66993007,2134,11_66993007_2134,11_66993007_2134
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr11,102247576,90797290,-11450286,translocation,14,,-1,-1,,,True,11_102247576,2135,11_102247576_2135,11_102247576_2135
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,3725713,9909955,6184242,inversion,12,5UTRintron,2,20,CRACR2A,ENST00000440314,True,12_3725713,2138,12_3725713_2138,12_3725713_2138
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,4322873,18080777,13757904,tandem-duplication,12,intron,1,6,TIGAR,ENST00000179259,True,12_4322873,2139,12_4322873_2139,12_4322873_2139
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,4322873,18080814,13757941,inversion,12,intron,1,6,TIGAR,ENST00000179259,True,12_4322873,2140,12_4322873_2140,12_4322873_2140
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,9221392,19637044,10415652,translocation,6,,-1,-1,,,True,12_9221392,1974,12_9221392_1974,12_9221392_1974
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,11259025,12768343,1509318,deletion,12,,-1,-1,,,True,12_11259025,2146,12_11259025_2146,12_11259025_2146
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,11264063,11305876,41813,inversion,12,,-1,-1,,,True,12_11264063,2147,12_11264063_2147,12_11264063_2147
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,11287870,11292253,4383,inversion,12,,-1,-1,,,True,12_11287870,2149,12_11287870_2149,12_11287870_2149
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,11664888,11674345,9457,inversion,12,intron,1,8,ETV6,ENST00000396373,True,12_11664888,2153,12_11664888_2153,12_11664888_2153
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,11783119,11796634,13515,inversion,12,intron,2,8,ETV6,ENST00000396373,True,12_11783119,2154,12_11783119_2154,12_11783119_2154
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,12409519,12436314,26795,inversion,12,intron,2,4,BORCS5,ENST00000542728,True,12_12409519,2156,12_12409519_2156,12_12409519_2156
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,12769231,12770779,1548,inversion,12,intron,1,2,APOLD1,ENST00000326765,True,12_12769231,2157,12_12769231_2157,12_12769231_2157
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,15320685,94564262,79243577,translocation,4,5UTRintron,2,4,RERG,ENST00000393736,True,12_15320685,1957,12_15320685_1957,12_15320685_1957
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,18080774,18080921,147,inversion,12,,-1,-1,,,True,12_18080774,2158,12_18080774_2158,12_18080774_2158
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,26516365,107910769,81394404,translocation,X,intron,37,57,ITPR2,ENST00000381340,True,12_26516365,2159,12_26516365_2159,12_26516365_2159
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,30250592,55115026,24864434,translocation,7,UTRintron,1,4,LINC02386,ENST00000552182,True,12_30250592,2069,12_30250592_2069,12_30250592_2069
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,40486523,40488453,1930,deletion,12,,-1,-1,,,True,12_40486523,2166,12_40486523_2166,12_40486523_2166
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057591,134996610,68939019,translocation,6,,-1,-1,,,True,12_66057591,2025,12_66057591_2025,12_66057591_2025
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057592,90390460,24332868,translocation,2,,-1,-1,,,True,12_66057592,1819,12_66057592_1819,12_66057592_1819
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057592,134697341,68639749,translocation,6,,-1,-1,,,True,12_66057592,1993,12_66057592_1993,12_66057592_1993
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057592,135108043,69050451,translocation,6,,-1,-1,,,True,12_66057592,2034,12_66057592_2034,12_66057592_2034
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057592,135152865,69095273,translocation,6,,-1,-1,,,True,12_66057592,2036,12_66057592_2036,12_66057592_2036
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057592,135153666,69096074,translocation,6,,-1,-1,,,True,12_66057592,2037,12_66057592_2037,12_66057592_2037
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,66057592,130122079,64064487,translocation,8,,-1,-1,,,True,12_66057592,2110,12_66057592_2110,12_66057592_2110
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,120513236,120524536,11300,deletion,12,intron,3,7,COQ5,ENST00000288532,True,12_120513236,2169,12_120513236_2169,12_120513236_2169
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr12,132303854,132304854,1000,deletion,12,intron,1,11,GALNT9,ENST00000328957,True,12_132303854,2174,12_132303854_2174,12_132303854_2174
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,47083817,48205233,1121416,inversion,13,,-1,-1,,,True,13_47083817,2180,13_47083817_2180,13_47083817_2180
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,48168915,48205128,36213,inversion,13,,-1,-1,,,True,13_48168915,2181,13_48168915_2181,13_48168915_2181
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,48170399,48172216,1817,inversion,13,,-1,-1,,,True,13_48170399,2182,13_48170399_2182,13_48170399_2182
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,48245111,48250899,5788,inversion,13,intron,1,6,ITM2B,ENST00000378565,True,13_48245111,2183,13_48245111_2183,13_48245111_2183
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,48372231,73032804,24660573,translocation,6,intron,11,27,RB1,ENST00000267163,True,13_48372231,1983,13_48372231_1983,13_48372231_1983
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,73143311,73281109,137798,tandem-duplication,13,,-1,-1,,,True,13_73143311,2184,13_73143311_2184,13_73143311_2184
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,73257838,73262834,4996,deletion,13,,-1,-1,,,True,13_73257838,2185,13_73257838_2185,13_73257838_2185
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr13,73312835,73495797,182962,tandem-duplication,13,,-1,-1,,,True,13_73312835,2186,13_73312835_2186,13_73312835_2186
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr14,77401213,77402818,1605,deletion,14,intron,5,6,NOXRED1,ENST00000380835,True,14_77401213,2191,14_77401213_2191,14_77401213_2191
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr15,67060978,67069965,8987,deletion,15,,-1,-1,,,True,15_67060978,2198,15_67060978_2198,15_67060978_2198
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr15,77019103,77035104,16001,inversion,15,intron,3,15,PSTPIP1,ENST00000558012,True,15_77019103,2199,15_77019103_2199,15_77019103_2199
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr16,11912360,11921907,9547,inversion,16,intron,1,15,GSPT1,ENST00000434724,True,16_11912360,2203,16_11912360_2203,16_11912360_2203
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr16,11912361,11917366,5005,inversion,16,intron,1,15,GSPT1,ENST00000434724,True,16_11912361,2202,16_11912361_2202,16_11912361_2202
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr16,72624127,38417733,-34206394,translocation,21,UTRintron,1,14,LINC01572,ENST00000624829,True,16_72624127,2212,16_72624127_2212,16_72624127_2212
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr17,58639527,58641238,1711,deletion,17,intron,2,33,TEX14,ENST00000389934,True,17_58639527,2222,17_58639527_2222,17_58639527_2222
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr18,62580652,62581358,706,deletion,18,,-1,-1,,,True,18_62580652,2226,18_62580652_2226,18_62580652_2226
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr19,17610425,17614906,4481,inversion,19,intron,42,44,UNC13A,ENST00000519716,True,19_17610425,2231,19_17610425_2231,19_17610425_2231
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr19,17613071,17614932,1861,inversion,19,intron,41,44,UNC13A,ENST00000519716,True,19_17613071,2232,19_17613071_2232,19_17613071_2232
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr19,19172187,19269053,96866,tandem-duplication,19,5UTRintron,3,10,BORCS8-MEF2B,ENST00000444486,True,19_19172187,2233,19_19172187_2233,19_19172187_2233
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr19,33757592,49200541,15442949,translocation,3,intron,2,4,CHST8,ENST00000262622,True,19_33757592,1845,19_33757592_1845,19_33757592_1845
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr19,54169030,165291599,111122569,translocation,2,intron,3,15,TMC4,ENST00000617472,True,19_54169030,1841,19_54169030_1841,19_54169030_1841
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr20,28626803,40981520,12354717,translocation,9,,-1,-1,,,True,20_28626803,2118,20_28626803_2118,20_28626803_2118
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr21,10419633,43017338,32597705,translocation,8,,-1,-1,,,True,21_10419633,2094,21_10419633_2094,21_10419633_2094
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr21,35685567,35686134,567,inversion,21,5UTRintron,6,13,RUNX1,ENST00000475045,True,21_35685567,2251,21_35685567_2251,21_35685567_2251
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr21,39634507,39635397,890,inversion,21,5UTRintron,2,5,B3GALT5,ENST00000380620,True,21_39634507,2252,21_39634507_2252,21_39634507_2252
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr22,10726834,10730227,3393,deletion,22,,-1,-1,,,True,22_10726834,2253,22_10726834_2253,22_10726834_2253
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr22,36340641,36376919,36278,tandem-duplication,22,intron,3,41,MYH9,ENST00000216181,True,22_36340641,2255,22_36340641_2255,22_36340641_2255
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chr22,36361841,36376044,14203,tandem-duplication,22,5UTRintron,1,41,MYH9,ENST00000216181,True,22_36361841,2256,22_36361841_2256,22_36361841_2256
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chrX,1855175,1858824,3649,deletion,X,,-1,-1,,,True,X_1855175,2259,X_1855175_2259,X_1855175_2259
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chrX,62627518,62640390,12872,tandem-duplication,X,,-1,-1,,,True,X_62627518,2261,X_62627518_2261,X_62627518_2261
t4_IPMN_HGD_PDAC_case7_S5,IPMN_HGD_PDAC_case7_S5,case7_S5_IPMN_HGD_PDAC,case7,case7_S5,IPMN_HGD_PDAC,t4,chrX,121582439,132052493,10470054,inversion,X,,-1,-1,,,True,X_121582439,2262,X_121582439_2262,X_121582439_2262
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr1,31145100,31220754,75654,deletion,1,,-1,-1,,,True,1_31145100,8,1_31145100_8,1_31145100_8
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr1,61239599,54423597,-6816002,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239599,11,1_61239599_11,1_61239599_11
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr1,61239837,54422527,-6817310,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239837,10,1_61239837_10,1_61239837_10
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr2,24042830,24064424,21594,deletion,2,5UTRintron,1,4,WDCP,ENST00000295148,True,2_24042830,42,2_24042830_42,2_24042830_42
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr2,58749577,58777824,28247,deletion,2,UTRintron,3,12,LINC01122,ENST00000452840,True,2_58749577,478,2_58749577_478,2_58749577_478
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr2,197922836,178518557,-19404279,translocation,5,intron,1,6,PLCL1,ENST00000428675,True,2_197922836,482,2_197922836_482,2_197922836_482
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr3,44482058,138304062,93822004,translocation,4,,-1,-1,,,True,3_44482058,484,3_44482058_484,3_44482058_484
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr3,88850491,88859478,8987,inversion,3,,-1,-1,,,True,3_88850491,487,3_88850491_487,3_88850491_487
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr3,185850303,13004247,-172846056,translocation,Y,,-1,-1,,,True,3_185850303,494,3_185850303_494,3_185850303_494
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr3,192632883,192646156,13273,deletion,3,intron,2,6,FGF12,ENST00000445105,True,3_192632883,495,3_192632883_495,3_192632883_495
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,9743081,10060122,317041,deletion,4,,-1,-1,,,True,4_9743081,497,4_9743081_497,4_9743081_497
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,102520335,102582253,61918,tandem-duplication,4,5UTRintron,1,24,NFKB1,ENST00000226574,True,4_102520335,498,4_102520335_498,4_102520335_498
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,117946729,118012704,65975,tandem-duplication,4,,-1,-1,,,True,4_117946729,499,4_117946729_499,4_117946729_499
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,145210668,145238789,28121,deletion,4,,-1,-1,,,True,4_145210668,501,4_145210668_501,4_145210668_501
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,147209760,81952508,-65257252,translocation,5,,-1,-1,,,True,4_147209760,502,4_147209760_502,4_147209760_502
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,153863337,155158604,1295267,inversion,4,,-1,-1,,,True,4_153863337,506,4_153863337_506,4_153863337_506
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,153863343,153881601,18258,deletion,4,,-1,-1,,,True,4_153863343,503,4_153863343_503,4_153863343_503
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,153863570,155143044,1279474,inversion,4,,-1,-1,,,True,4_153863570,504,4_153863570_504,4_153863570_504
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr4,179719877,179728300,8423,deletion,4,,-1,-1,,,True,4_179719877,507,4_179719877_507,4_179719877_507
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr5,9936667,10048330,111663,inversion,5,,-1,-1,,,True,5_9936667,512,5_9936667_512,5_9936667_512
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr5,9938679,12612397,2673718,inversion,5,,-1,-1,,,True,5_9938679,513,5_9938679_513,5_9938679_513
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr5,65932347,65933853,1506,inversion,5,5UTRintron,1,26,ERBIN,ENST00000284037,True,5_65932347,518,5_65932347_518,5_65932347_518
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr5,171465313,171627774,162461,deletion,5,,-1,-1,,,True,5_171465313,523,5_171465313_523,5_171465313_523
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr5,177336603,177407384,70781,tandem-duplication,5,intron,6,8,LMAN2,ENST00000303127,True,5_177336603,526,5_177336603_526,5_177336603_526
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr6,160742331,160746587,4256,deletion,6,intron,17,19,PLG,ENST00000308192,True,6_160742331,530,6_160742331_530,6_160742331_530
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr7,96165177,96179048,13871,deletion,7,intron,13,18,SLC25A13,ENST00000416240,True,7_96165177,532,7_96165177_532,7_96165177_532
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr7,102928163,102975830,47667,tandem-duplication,7,intron,9,20,FBXL13,ENST00000313221,True,7_102928163,533,7_102928163_533,7_102928163_533
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr7,150292986,150385072,92086,tandem-duplication,7,intron,3,8,ACTR3C,ENST00000252071,True,7_150292986,534,7_150292986_534,7_150292986_534
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr8,108011463,108021229,9766,deletion,8,5UTRintron,1,5,RSPO2,ENST00000517939,True,8_108011463,541,8_108011463_541,8_108011463_541
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr9,131010939,131018566,7627,deletion,9,intron,1,28,LAMC3,ENST00000361069,True,9_131010939,543,9_131010939_543,9_131010939_543
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr10,102156175,60980812,-41175363,translocation,20,intron,1,13,NOLC1,ENST00000405356,True,10_102156175,550,10_102156175_550,10_102156175_550
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr11,4895051,4896860,1809,tandem-duplication,11,5UTRintron,1,7,MMP26,ENST00000380390,True,11_4895051,551,11_4895051_551,11_4895051_551
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr11,57037913,57061868,23955,deletion,11,,-1,-1,,,True,11_57037913,553,11_57037913_553,11_57037913_553
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr11,64197838,64438565,240727,tandem-duplication,11,intron,7,14,STIP1,ENST00000358794,True,11_64197838,554,11_64197838_554,11_64197838_554
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr11,92180057,58254981,-33925076,translocation,2,,-1,-1,,,True,11_92180057,477,11_92180057_477,11_92180057_477
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr11,113849282,115072365,1223083,deletion,11,5UTRintron,1,22,USP28,ENST00000545540,True,11_113849282,555,11_113849282_555,11_113849282_555
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr12,66057592,15293965,-50763627,translocation,8,,-1,-1,,,True,12_66057592,535,12_66057592_535,12_66057592_535
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr12,84095447,86255703,2160256,deletion,12,,-1,-1,,,True,12_84095447,557,12_84095447_557,12_84095447_557
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr12,89443971,172724526,83280555,translocation,5,intron,10,12,POC1B,ENST00000313546,True,12_89443971,525,12_89443971_525,12_89443971_525
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr12,90365990,171755683,81389693,translocation,5,,-1,-1,,,True,12_90365990,524,12_90365990_524,12_90365990_524
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr12,95722973,108636891,12913918,inversion,12,intron,3,10,NTN4,ENST00000343702,True,12_95722973,558,12_95722973_558,12_95722973_558
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr12,108579092,108636785,57693,deletion,12,,-1,-1,,,True,12_108579092,559,12_108579092_559,12_108579092_559
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr13,101424604,101431431,6827,deletion,13,,-1,-1,,,True,13_101424604,565,13_101424604_565,13_101424604_565
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr13,107434233,107648611,214378,deletion,13,intron,1,3,FAM155A,ENST00000375915,True,13_107434233,566,13_107434233_566,13_107434233_566
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr13,107685421,107752308,66887,deletion,13,intron,1,3,FAM155A,ENST00000375915,True,13_107685421,567,13_107685421_567,13_107685421_567
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr13,107755215,107763773,8558,deletion,13,intron,1,3,FAM155A,ENST00000375915,True,13_107755215,568,13_107755215_568,13_107755215_568
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr15,92733003,92775653,42650,deletion,15,5UTRintron,1,4,FAM174B,ENST00000557398,True,15_92733003,570,15_92733003_570,15_92733003_570
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,22522094,60594263,38072169,deletion,17,,-1,-1,,,True,17_22522094,574,17_22522094_574,17_22522094_574
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,46740532,48326313,1585781,tandem-duplication,17,intron,17,21,NSF,ENST00000398238,True,17_46740532,577,17_46740532_577,17_46740532_577
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,46829874,46832196,2322,inversion,17,,-1,-1,,,True,17_46829874,578,17_46829874_578,17_46829874_578
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,46853228,49919211,3065983,inversion,17,intron,1,5,WNT9B,ENST00000393461,True,17_46853228,579,17_46853228_579,17_46853228_579
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,46903214,53576345,6673131,tandem-duplication,17,,-1,-1,,,True,17_46903214,580,17_46903214_580,17_46903214_580
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,46922699,58083841,11161142,translocation,5,UTRintron,1,3,AC005670.1,ENST00000572349,True,17_46922699,517,17_46922699_517,17_46922699_517
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,47243332,53456934,6213602,inversion,17,,-1,-1,,,True,17_47243332,581,17_47243332_581,17_47243332_581
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,47526270,54125305,6599035,deletion,17,intron,1,24,NPEPPS,ENST00000530173,True,17_47526270,582,17_47526270_582,17_47526270_582
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,47532393,54090333,6557940,tandem-duplication,17,intron,2,24,NPEPPS,ENST00000530173,True,17_47532393,583,17_47532393_583,17_47532393_583
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,47566871,54186721,6619850,deletion,17,intron,3,24,NPEPPS,ENST00000530173,True,17_47566871,584,17_47566871_584,17_47566871_584
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,47666152,53381051,5714899,inversion,17,intron,9,22,KPNB1,ENST00000290158,True,17_47666152,585,17_47666152_585,17_47666152_585
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,47936046,48262028,325982,deletion,17,,-1,-1,,,True,17_47936046,586,17_47936046_586,17_47936046_586
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,51914262,51914681,419,inversion,17,intron,3,9,CA10,ENST00000451037,True,17_51914262,587,17_51914262_587,17_51914262_587
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,53087694,53089781,2087,inversion,17,,-1,-1,,,True,17_53087694,588,17_53087694_588,17_53087694_588
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,55018477,55022348,3871,inversion,17,intron,8,18,STXBP4,ENST00000376352,True,17_55018477,589,17_55018477_589,17_55018477_589
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr17,60601208,61499429,898221,deletion,17,intron,1,6,PPM1D,ENST00000305921,True,17_60601208,590,17_60601208_590,17_60601208_590
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr18,7300725,7302491,1766,deletion,18,,-1,-1,,,True,18_7300725,593,18_7300725_593,18_7300725_593
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr18,11884416,88858316,76973900,translocation,3,3UTRexon,11,11,MPPE1,ENST00000588072,True,18_11884416,488,18_11884416_488,18_11884416_488
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr18,44189210,44206350,17140,deletion,18,,-1,-1,,,True,18_44189210,594,18_44189210_594,18_44189210_594
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr18,53317382,53333682,16300,deletion,18,intron,13,29,DCC,ENST00000442544,True,18_53317382,595,18_53317382_595,18_53317382_595
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr19,29439589,29441746,2157,inversion,19,UTRintron,1,10,AC011474.1,ENST00000582581,True,19_29439589,599,19_29439589_599,19_29439589_599
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chr22,16776001,8423622,-8352379,translocation,7,,-1,-1,,,True,22_16776001,531,22_16776001_531,22_16776001_531
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chrX,27134302,27190542,56240,deletion,X,UTRintron,1,2,AC112493.1,ENST00000609836,True,X_27134302,606,X_27134302_606,X_27134302_606
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chrX,41601119,41630739,29620,deletion,X,intron,11,25,CASK,ENST00000421587,True,X_41601119,607,X_41601119_607,X_41601119_607
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chrX,79771139,79775614,4475,tandem-duplication,X,,-1,-1,,,True,X_79771139,609,X_79771139_609,X_79771139_609
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chrX,79771226,79772706,1480,inversion,X,,-1,-1,,,True,X_79771226,608,X_79771226_608,X_79771226_608
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chrX,79775231,79776431,1200,inversion,X,,-1,-1,,,True,X_79775231,610,X_79775231_610,X_79775231_610
t6_PDAC_case9_S2,PDAC_case9_S2,case9_S2_PDAC,case9,case9_S2,PDAC,t6,chrX,101107806,101117049,9243,deletion,X,intron,3,21,CENPI,ENST00000372927,True,X_101107806,611,X_101107806_611,X_101107806_611
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,6658998,6662401,3403,deletion,1,intron,4,16,DNAJC11,ENST00000377577,True,1_6658998,9,1_6658998_9,1_6658998_9
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,31145100,31220754,75654,deletion,1,,-1,-1,,,True,1_31145100,18,1_31145100_18,1_31145100_18
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,35082048,213673523,178591475,translocation,2,5UTRintron,2,11,ZMYM1,ENST00000611874,True,1_35082048,19,1_35082048_19,1_35082048_19
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,49377882,147781072,98403190,translocation,2,intron,3,14,AGBL4,ENST00000371839,True,1_49377882,25,1_49377882_25,1_49377882_25
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,49378194,147781207,98403013,translocation,2,intron,3,14,AGBL4,ENST00000371839,True,1_49378194,24,1_49378194_24,1_49378194_24
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,61239599,54423597,-6816002,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239599,28,1_61239599_28,1_61239599_28
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,61239834,54422527,-6817307,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239834,29,1_61239834_29,1_61239834_29
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,207187227,39348443,-167838784,translocation,4,,-1,-1,,,True,1_207187227,74,1_207187227_74,1_207187227_74
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,219605987,219709439,103452,deletion,1,,-1,-1,,,True,1_219605987,79,1_219605987_79,1_219605987_79
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,237042311,183972268,-53070043,translocation,2,5UTRexon,1,105,RYR2,ENST00000366574,True,1_237042311,84,1_237042311_84,1_237042311_84
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr1,240651964,240664729,12765,tandem-duplication,1,,-1,-1,,,True,1_240651964,87,1_240651964_87,1_240651964_87
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,22913618,22916097,2479,deletion,2,,-1,-1,,,True,2_22913618,103,2_22913618_103,2_22913618_103
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,24042830,24064428,21598,deletion,2,5UTRintron,1,4,WDCP,ENST00000295148,True,2_24042830,104,2_24042830_104,2_24042830_104
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,24911785,24966548,54763,tandem-duplication,2,intron,1,21,ADCY3,ENST00000260600,True,2_24911785,106,2_24911785_106,2_24911785_106
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,58749583,58777833,28250,deletion,2,UTRintron,3,12,LINC01122,ENST00000452840,True,2_58749583,1207,2_58749583_1207,2_58749583_1207
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,117779582,117789187,9605,deletion,2,,-1,-1,,,True,2_117779582,1214,2_117779582_1214,2_117779582_1214
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,162593838,58083704,-104510134,translocation,5,intron,2,16,KCNH7,ENST00000332142,True,2_162593838,1216,2_162593838_1216,2_162593838_1216
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,178443385,178450965,7580,deletion,2,intron,4,8,PRKRA,ENST00000325748,True,2_178443385,1220,2_178443385_1220,2_178443385_1220
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,194000889,194002891,2002,deletion,2,,-1,-1,,,True,2_194000889,1221,2_194000889_1221,2_194000889_1221
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,202522481,202526062,3581,inversion,2,intron,7,13,BMPR2,ENST00000374580,True,2_202522481,1222,2_202522481_1222,2_202522481_1222
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,232249050,232291878,42828,tandem-duplication,2,intron,11,14,DIS3L2,ENST00000273009,True,2_232249050,1223,2_232249050_1223,2_232249050_1223
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr2,241485001,241487746,2745,deletion,2,intron,21,27,FARP2,ENST00000264042,True,2_241485001,1224,2_241485001_1224,2_241485001_1224
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,13736456,85568166,71831710,translocation,X,,-1,-1,,,True,3_13736456,1225,3_13736456_1225,3_13736456_1225
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,37362367,166644525,129282158,inversion,3,3UTRintron,23,24,GOLGA4,ENST00000361924,True,3_37362367,1229,3_37362367_1229,3_37362367_1229
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,44482058,138304062,93822004,translocation,4,,-1,-1,,,True,3_44482058,1231,3_44482058_1231,3_44482058_1231
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,70868955,70955853,86898,tandem-duplication,3,,-1,-1,,,True,3_70868955,1233,3_70868955_1233,3_70868955_1233
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,88850491,88859478,8987,inversion,3,,-1,-1,,,True,3_88850491,1234,3_88850491_1234,3_88850491_1234
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,122064616,122210544,145928,tandem-duplication,3,5UTRintron,1,6,CD86,ENST00000469710,True,3_122064616,1259,3_122064616_1259,3_122064616_1259
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,169252277,169325596,73319,tandem-duplication,3,intron,2,16,MECOM,ENST00000494292,True,3_169252277,1262,3_169252277_1262,3_169252277_1262
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,174009050,174448191,439141,tandem-duplication,3,intron,4,7,NLGN1,ENST00000457714,True,3_174009050,1263,3_174009050_1263,3_174009050_1263
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,190114205,190116923,2718,deletion,3,5UTRintron,1,15,P3H2,ENST00000427335,True,3_190114205,1265,3_190114205_1265,3_190114205_1265
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr3,192632883,192646108,13225,deletion,3,intron,2,6,FGF12,ENST00000445105,True,3_192632883,1266,3_192632883_1266,3_192632883_1266
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,11769863,30296850,18526987,deletion,4,UTRintron,2,4,AC005699.1,ENST00000510095,True,4_11769863,1268,4_11769863_1268,4_11769863_1268
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,41974536,41980845,6309,deletion,4,,-1,-1,,,True,4_41974536,1271,4_41974536_1271,4_41974536_1271
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,75580702,117704917,42124215,translocation,X,3UTRintron,11,12,CDKL2,ENST00000429927,True,4_75580702,1277,4_75580702_1277,4_75580702_1277
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,102520335,102582255,61920,tandem-duplication,4,5UTRintron,1,24,NFKB1,ENST00000226574,True,4_102520335,1278,4_102520335_1278,4_102520335_1278
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,117946729,118012704,65975,tandem-duplication,4,,-1,-1,,,True,4_117946729,1279,4_117946729_1279,4_117946729_1279
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,145210668,145238789,28121,deletion,4,,-1,-1,,,True,4_145210668,1281,4_145210668_1281,4_145210668_1281
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,146573930,146646791,72861,tandem-duplication,4,,-1,-1,,,True,4_146573930,1282,4_146573930_1282,4_146573930_1282
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,147209034,81952656,-65256378,translocation,5,,-1,-1,,,True,4_147209034,1283,4_147209034_1283,4_147209034_1283
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,147209822,81952506,-65257316,translocation,5,,-1,-1,,,True,4_147209822,1284,4_147209822_1284,4_147209822_1284
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,153863051,155158604,1295553,inversion,4,,-1,-1,,,True,4_153863051,1286,4_153863051_1286,4_153863051_1286
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,153863343,153881601,18258,deletion,4,,-1,-1,,,True,4_153863343,1285,4_153863343_1285,4_153863343_1285
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,153863570,155143044,1279474,inversion,4,,-1,-1,,,True,4_153863570,1287,4_153863570_1287,4_153863570_1287
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr4,164323893,164325586,1693,inversion,4,5UTRintron,1,8,MARCH1,ENST00000503008,True,4_164323893,1289,4_164323893_1289,4_164323893_1289
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,8235381,8236779,1398,tandem-duplication,5,,-1,-1,,,True,5_8235381,1297,5_8235381_1297,5_8235381_1297
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,9936667,10048294,111627,inversion,5,,-1,-1,,,True,5_9936667,1298,5_9936667_1298,5_9936667_1298
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,9938679,12612397,2673718,inversion,5,,-1,-1,,,True,5_9938679,1299,5_9938679_1299,5_9938679_1299
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,65932336,65933393,1057,inversion,5,5UTRintron,1,26,ERBIN,ENST00000284037,True,5_65932336,1305,5_65932336_1305,5_65932336_1305
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,65932347,65933853,1506,inversion,5,5UTRintron,1,26,ERBIN,ENST00000284037,True,5_65932347,1306,5_65932347_1306,5_65932347_1306
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,92555758,128764169,36208411,deletion,5,UTRintron,2,4,AC124854.1,ENST00000512210,True,5_92555758,1307,5_92555758_1307,5_92555758_1307
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,132828386,132941529,113143,tandem-duplication,5,5UTRintron,1,10,SHROOM1,ENST00000378679,True,5_132828386,1311,5_132828386_1311,5_132828386_1311
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,140860490,140870836,10346,deletion,5,intron,1,4,PCDHA1,ENST00000504120,True,5_140860490,1312,5_140860490_1312,5_140860490_1312
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,171465313,171627774,162461,deletion,5,,-1,-1,,,True,5_171465313,1314,5_171465313_1314,5_171465313_1314
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,177336603,177407384,70781,tandem-duplication,5,intron,6,8,LMAN2,ENST00000303127,True,5_177336603,1318,5_177336603_1318,5_177336603_1318
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr5,177953322,177957191,3869,deletion,5,UTRintron,1,2,AC106795.3,ENST00000511650,True,5_177953322,1319,5_177953322_1319,5_177953322_1319
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,20235547,20426234,190687,inversion,6,,-1,-1,,,True,6_20235547,1322,6_20235547_1322,6_20235547_1322
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,20240996,20428316,187320,inversion,6,,-1,-1,,,True,6_20240996,1323,6_20240996_1323,6_20240996_1323
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,29325968,29519273,193305,deletion,6,,-1,-1,,,True,6_29325968,1324,6_29325968_1324,6_29325968_1324
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,50487716,61386226,10898510,tandem-duplication,6,,-1,-1,,,True,6_50487716,1327,6_50487716_1327,6_50487716_1327
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,60715282,61520942,805660,inversion,6,,-1,-1,,,True,6_60715282,1331,6_60715282_1331,6_60715282_1331
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,61161951,61166128,4177,deletion,6,,-1,-1,,,True,6_61161951,1332,6_61161951_1332,6_61161951_1332
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,63872396,66870576,2998180,deletion,6,intron,35,44,EYS,ENST00000370621,True,6_63872396,1333,6_63872396_1333,6_63872396_1333
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,159254658,159259279,4621,deletion,6,intron,17,23,FNDC1,ENST00000297267,True,6_159254658,1335,6_159254658_1335,6_159254658_1335
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr6,160742331,160746587,4256,deletion,6,intron,17,19,PLG,ENST00000308192,True,6_160742331,1336,6_160742331_1336,6_160742331_1336
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,18773790,88884734,70110944,translocation,9,intron,15,25,HDAC9,ENST00000441542,True,7_18773790,1338,7_18773790_1338,7_18773790_1338
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,96165177,96179048,13871,deletion,7,intron,13,18,SLC25A13,ENST00000416240,True,7_96165177,1343,7_96165177_1343,7_96165177_1343
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,102312999,102316956,3957,deletion,7,intron,4,9,SH2B2,ENST00000536178,True,7_102312999,1344,7_102312999_1344,7_102312999_1344
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,102928163,102975830,47667,tandem-duplication,7,intron,9,20,FBXL13,ENST00000313221,True,7_102928163,1345,7_102928163_1345,7_102928163_1345
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,112176071,115226573,3050502,inversion,7,intron,1,52,DOCK4,ENST00000437633,True,7_112176071,1347,7_112176071_1347,7_112176071_1347
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,112176078,115226259,3050181,tandem-duplication,7,intron,1,52,DOCK4,ENST00000437633,True,7_112176078,1346,7_112176078_1346,7_112176078_1346
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,112176495,115226875,3050380,deletion,7,intron,1,52,DOCK4,ENST00000437633,True,7_112176495,1348,7_112176495_1348,7_112176495_1348
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,112176507,115226267,3049760,inversion,7,intron,1,52,DOCK4,ENST00000437633,True,7_112176507,1349,7_112176507_1349,7_112176507_1349
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr7,150292986,150385072,92086,tandem-duplication,7,intron,3,8,ACTR3C,ENST00000252071,True,7_150292986,1351,7_150292986_1351,7_150292986_1351
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr8,52675702,52708693,32991,deletion,8,intron,6,24,RB1CC1,ENST00000025008,True,8_52675702,1364,8_52675702_1364,8_52675702_1364
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr8,92199953,92204149,4196,deletion,8,,-1,-1,,,True,8_92199953,1365,8_92199953_1365,8_92199953_1365
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr8,108011463,108021229,9766,deletion,8,5UTRintron,1,5,RSPO2,ENST00000517939,True,8_108011463,1368,8_108011463_1368,8_108011463_1368
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr8,110792678,110796734,4056,inversion,8,,-1,-1,,,True,8_110792678,1369,8_110792678_1369,8_110792678_1369
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr9,111837732,111839271,1539,deletion,9,,-1,-1,,,True,9_111837732,1375,9_111837732_1375,9_111837732_1375
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr9,138058780,138122637,63857,tandem-duplication,9,intron,29,47,CACNA1B,ENST00000371372,True,9_138058780,1376,9_138058780_1376,9_138058780_1376
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr9,138059060,138122644,63584,inversion,9,intron,29,47,CACNA1B,ENST00000371372,True,9_138059060,1377,9_138059060_1377,9_138059060_1377
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,12300420,12306609,6189,deletion,10,,-1,-1,,,True,10_12300420,1378,10_12300420_1378,10_12300420_1378
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,24749860,3835201,-20914659,translocation,5,,-1,-1,,,True,10_24749860,1294,10_24749860_1294,10_24749860_1294
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,26185832,26219828,33996,tandem-duplication,10,intron,31,35,MYO3A,ENST00000265944,True,10_26185832,1379,10_26185832_1379,10_26185832_1379
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,36128707,36131191,2484,deletion,10,,-1,-1,,,True,10_36128707,1385,10_36128707_1385,10_36128707_1385
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,75077839,75078171,332,inversion,10,,-1,-1,,,True,10_75077839,1389,10_75077839_1389,10_75077839_1389
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,95035227,102841660,7806433,tandem-duplication,10,,-1,-1,,,True,10_95035227,1390,10_95035227_1390,10_95035227_1390
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,96662712,27635830,-69026882,translocation,X,intron,2,17,PIK3AP1,ENST00000339364,True,10_96662712,1391,10_96662712_1391,10_96662712_1391
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,100592788,100597538,4750,deletion,10,,-1,-1,,,True,10_100592788,1392,10_100592788_1392,10_100592788_1392
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,102156175,60980812,-41175363,translocation,20,intron,1,13,NOLC1,ENST00000405356,True,10_102156175,1393,10_102156175_1393,10_102156175_1393
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr10,117315861,117317260,1399,tandem-duplication,10,intron,3,5,PDZD8,ENST00000334464,True,10_117315861,1394,10_117315861_1394,10_117315861_1394
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,36083082,10103769,-25979313,translocation,8,intron,3,6,LDLRAD3,ENST00000315571,True,11_36083082,1354,11_36083082_1354,11_36083082_1354
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,47429095,5746711,-41682384,translocation,5,,-1,-1,,,True,11_47429095,1295,11_47429095_1295,11_47429095_1295
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,64197838,64438582,240744,tandem-duplication,11,intron,7,14,STIP1,ENST00000358794,True,11_64197838,1396,11_64197838_1396,11_64197838_1396
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,69978641,69986517,7876,tandem-duplication,11,,-1,-1,,,True,11_69978641,1397,11_69978641_1397,11_69978641_1397
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,89115173,89415751,300578,deletion,11,,-1,-1,,,True,11_89115173,1398,11_89115173_1398,11_89115173_1398
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,92180057,58254981,-33925076,translocation,2,,-1,-1,,,True,11_92180057,1206,11_92180057_1206,11_92180057_1206
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr11,113849284,115072365,1223081,deletion,11,5UTRintron,1,22,USP28,ENST00000545540,True,11_113849284,1399,11_113849284_1399,11_113849284_1399
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,66057591,129351469,63293878,translocation,8,,-1,-1,,,True,12_66057591,1370,12_66057591_1370,12_66057591_1370
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,66057592,64866359,-1191233,translocation,16,,-1,-1,,,True,12_66057592,1406,12_66057592_1406,12_66057592_1406
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,67409481,61565278,-5844203,translocation,16,,-1,-1,,,True,12_67409481,1407,12_67409481_1407,12_67409481_1407
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,84095447,86255653,2160206,deletion,12,,-1,-1,,,True,12_84095447,1408,12_84095447_1408,12_84095447_1408
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,89376742,89380789,4047,deletion,12,,-1,-1,,,True,12_89376742,1409,12_89376742_1409,12_89376742_1409
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,89443971,172724526,83280555,translocation,5,intron,10,12,POC1B,ENST00000313546,True,12_89443971,1317,12_89443971_1317,12_89443971_1317
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,90365990,171755683,81389693,translocation,5,,-1,-1,,,True,12_90365990,1316,12_90365990_1316,12_90365990_1316
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,90367617,171753113,81385496,translocation,5,,-1,-1,,,True,12_90367617,1315,12_90367617_1315,12_90367617_1315
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,95722930,108636788,12913858,inversion,12,intron,3,10,NTN4,ENST00000343702,True,12_95722930,1411,12_95722930_1411,12_95722930_1411
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,95723115,108579066,12855951,inversion,12,intron,3,10,NTN4,ENST00000343702,True,12_95723115,1410,12_95723115_1410,12_95723115_1410
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,107603530,107633299,29769,deletion,12,intron,4,17,BTBD11,ENST00000280758,True,12_107603530,1412,12_107603530_1412,12_107603530_1412
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr12,108579092,108636785,57693,deletion,12,,-1,-1,,,True,12_108579092,1413,12_108579092_1413,12_108579092_1413
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,18207159,18208600,1441,deletion,13,,-1,-1,,,True,13_18207159,1418,13_18207159_1418,13_18207159_1418
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,48818268,48849528,31260,deletion,13,,-1,-1,,,True,13_48818268,1419,13_48818268_1419,13_48818268_1419
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,49318419,162752902,113434483,translocation,2,intron,11,12,CAB39L,ENST00000610540,True,13_49318419,1219,13_49318419_1219,13_49318419_1219
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,59570785,59574555,3770,deletion,13,,-1,-1,,,True,13_59570785,1420,13_59570785_1420,13_59570785_1420
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,101424604,101431431,6827,deletion,13,,-1,-1,,,True,13_101424604,1421,13_101424604_1421,13_101424604_1421
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,107434233,107648611,214378,deletion,13,intron,1,3,FAM155A,ENST00000375915,True,13_107434233,1422,13_107434233_1422,13_107434233_1422
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,107685421,107752308,66887,deletion,13,intron,1,3,FAM155A,ENST00000375915,True,13_107685421,1423,13_107685421_1423,13_107685421_1423
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,107755215,107763773,8558,deletion,13,intron,1,3,FAM155A,ENST00000375915,True,13_107755215,1424,13_107755215_1424,13_107755215_1424
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,109382851,26204234,-83178617,translocation,5,,-1,-1,,,True,13_109382851,1301,13_109382851_1301,13_109382851_1301
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr13,109978180,17787598,-92190582,translocation,5,,-1,-1,,,True,13_109978180,1300,13_109978180_1300,13_109978180_1300
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr14,28067207,54498522,26431315,tandem-duplication,14,,-1,-1,,,True,14_28067207,1426,14_28067207_1426,14_28067207_1426
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr14,44862870,44958514,95644,tandem-duplication,14,,-1,-1,,,True,14_44862870,1427,14_44862870_1427,14_44862870_1427
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr14,47603932,47626073,22141,deletion,14,intron,1,17,MDGA2,ENST00000426342,True,14_47603932,1428,14_47603932_1428,14_47603932_1428
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr15,77469237,186874555,109405318,translocation,4,intron,5,11,HMG20A,ENST00000381714,True,15_77469237,1291,15_77469237_1291,15_77469237_1291
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr15,92733003,92775653,42650,deletion,15,5UTRintron,1,4,FAM174B,ENST00000557398,True,15_92733003,1438,15_92733003_1438,15_92733003_1438
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr15,93548516,93580687,32171,tandem-duplication,15,UTRintron,3,4,AC091078.1,ENST00000543286,True,15_93548516,1439,15_93548516_1439,15_93548516_1439
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr15,95241209,95445119,203910,deletion,15,UTRintron,1,3,LINC01197,ENST00000614853,True,15_95241209,1441,15_95241209_1441,15_95241209_1441
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr16,10338123,10341288,3165,deletion,16,,-1,-1,,,True,16_10338123,1442,16_10338123_1442,16_10338123_1442
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr16,21262256,21513085,250829,tandem-duplication,16,intron,7,10,CRYM,ENST00000219599,True,16_21262256,1444,16_21262256_1444,16_21262256_1444
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr16,35511807,35519309,7502,deletion,16,,-1,-1,,,True,16_35511807,1448,16_35511807_1448,16_35511807_1448
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr16,59047926,59052672,4746,deletion,16,UTRintron,2,4,AC092378.1,ENST00000500117,True,16_59047926,1449,16_59047926_1449,16_59047926_1449
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr16,73813166,73814627,1461,deletion,16,UTRintron,1,3,AC087565.3,ENST00000642085,True,16_73813166,1451,16_73813166_1451,16_73813166_1451
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr16,78919535,78928364,8829,deletion,16,intron,8,9,WWOX,ENST00000566780,True,16_78919535,1452,16_78919535_1452,16_78919535_1452
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,22522094,60594263,38072169,deletion,17,,-1,-1,,,True,17_22522094,1453,17_22522094_1453,17_22522094_1453
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,37837491,64066154,26228663,deletion,17,,-1,-1,,,True,17_37837491,1456,17_37837491_1456,17_37837491_1456
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46740532,48326313,1585781,tandem-duplication,17,intron,17,21,NSF,ENST00000398238,True,17_46740532,1457,17_46740532_1457,17_46740532_1457
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46829874,46832196,2322,inversion,17,,-1,-1,,,True,17_46829874,1458,17_46829874_1458,17_46829874_1458
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46853228,49919211,3065983,inversion,17,intron,1,5,WNT9B,ENST00000393461,True,17_46853228,1459,17_46853228_1459,17_46853228_1459
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46903214,53576345,6673131,tandem-duplication,17,,-1,-1,,,True,17_46903214,1460,17_46903214_1460,17_46903214_1460
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46921579,162594121,115672542,translocation,2,UTRintron,1,3,AC005670.1,ENST00000572349,True,17_46921579,1218,17_46921579_1218,17_46921579_1218
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46922619,58083841,11161222,translocation,5,UTRintron,1,3,AC005670.1,ENST00000572349,True,17_46922619,1304,17_46922619_1304,17_46922619_1304
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,46922726,162593838,115671112,translocation,2,UTRintron,1,3,AC005670.1,ENST00000572349,True,17_46922726,1217,17_46922726_1217,17_46922726_1217
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,47243332,53456934,6213602,inversion,17,,-1,-1,,,True,17_47243332,1462,17_47243332_1462,17_47243332_1462
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,47526270,54125305,6599035,deletion,17,intron,1,24,NPEPPS,ENST00000530173,True,17_47526270,1463,17_47526270_1463,17_47526270_1463
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,47532393,54090333,6557940,tandem-duplication,17,intron,2,24,NPEPPS,ENST00000530173,True,17_47532393,1464,17_47532393_1464,17_47532393_1464
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,47566871,54186721,6619850,deletion,17,intron,3,24,NPEPPS,ENST00000530173,True,17_47566871,1465,17_47566871_1465,17_47566871_1465
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,47666152,53381051,5714899,inversion,17,intron,9,22,KPNB1,ENST00000290158,True,17_47666152,1466,17_47666152_1466,17_47666152_1466
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,47936104,48262028,325924,deletion,17,,-1,-1,,,True,17_47936104,1467,17_47936104_1467,17_47936104_1467
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,50891743,64046559,13154816,tandem-duplication,17,,-1,-1,,,True,17_50891743,1468,17_50891743_1468,17_50891743_1468
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,51914262,51914681,419,inversion,17,intron,3,9,CA10,ENST00000451037,True,17_51914262,1469,17_51914262_1469,17_51914262_1469
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,52012683,41469518,-10543165,translocation,3,intron,2,9,CA10,ENST00000451037,True,17_52012683,1230,17_52012683_1230,17_52012683_1230
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,53087694,53089781,2087,inversion,17,,-1,-1,,,True,17_53087694,1470,17_53087694_1470,17_53087694_1470
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,54422527,54423597,1070,inversion,17,,-1,-1,,,True,17_54422527,1472,17_54422527_1472,17_54422527_1472
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,55018477,55022348,3871,inversion,17,intron,8,18,STXBP4,ENST00000376352,True,17_55018477,1473,17_55018477_1473,17_55018477_1473
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr17,60601208,61499429,898221,deletion,17,intron,1,6,PPM1D,ENST00000305921,True,17_60601208,1474,17_60601208_1474,17_60601208_1474
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,108494,110312,1818,deletion,18,,-1,-1,,,True,18_108494,1477,18_108494_1477,18_108494_1477
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,6278052,6281177,3125,deletion,18,intron,4,19,L3MBTL4,ENST00000317931,True,18_6278052,1480,18_6278052_1480,18_6278052_1480
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,11884421,88858316,76973895,translocation,3,3UTRexon,11,11,MPPE1,ENST00000588072,True,18_11884421,1235,18_11884421_1235,18_11884421_1235
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,25044340,25116051,71711,inversion,18,,-1,-1,,,True,18_25044340,1485,18_25044340_1485,18_25044340_1485
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,53317382,53333682,16300,deletion,18,intron,13,29,DCC,ENST00000442544,True,18_53317382,1486,18_53317382_1486,18_53317382_1486
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,65575717,65582205,6488,inversion,18,,-1,-1,,,True,18_65575717,1487,18_65575717_1487,18_65575717_1487
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr18,65575744,65591207,15463,inversion,18,,-1,-1,,,True,18_65575744,1488,18_65575744_1488,18_65575744_1488
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr19,11101443,11102223,780,inversion,19,intron,2,18,LDLR,ENST00000558518,True,19_11101443,1490,19_11101443_1490,19_11101443_1490
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr19,36531048,36537523,6475,tandem-duplication,19,,-1,-1,,,True,19_36531048,1492,19_36531048_1492,19_36531048_1492
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr19,42459342,42484142,24800,inversion,19,,-1,-1,,,True,19_42459342,1493,19_42459342_1493,19_42459342_1493
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr19,42933265,42940245,6980,deletion,19,intron,1,5,PSG7,ENST00000623675,True,19_42933265,1494,19_42933265_1494,19_42933265_1494
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr20,3087708,3104728,17020,tandem-duplication,20,,-1,-1,,,True,20_3087708,1498,20_3087708_1498,20_3087708_1498
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr20,28830738,28833109,2371,deletion,20,,-1,-1,,,True,20_28830738,1502,20_28830738_1502,20_28830738_1502
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr21,17085301,124505453,107420152,translocation,7,,-1,-1,,,True,21_17085301,1350,21_17085301_1350,21_17085301_1350
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr22,16415663,16442234,26571,tandem-duplication,22,,-1,-1,,,True,22_16415663,1510,22_16415663_1510,22_16415663_1510
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr22,16776001,8423622,-8352379,translocation,7,,-1,-1,,,True,22_16776001,1337,22_16776001_1337,22_16776001_1337
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr22,24575039,24585582,10543,tandem-duplication,22,3UTRintron,4,5,SNRPD3,ENST00000402849,True,22_24575039,1512,22_24575039_1512,22_24575039_1512
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr22,41786059,144969026,103182967,translocation,3,intron,26,31,MEI1,ENST00000401548,True,22_41786059,1260,22_41786059_1260,22_41786059_1260
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chr22,44531384,44534933,3549,deletion,22,,-1,-1,,,True,22_44531384,1513,22_44531384_1513,22_44531384_1513
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chrX,27134303,27190542,56239,deletion,X,UTRintron,1,2,AC112493.1,ENST00000609836,True,X_27134303,1514,X_27134303_1514,X_27134303_1514
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chrX,55789584,55791655,2071,deletion,X,,-1,-1,,,True,X_55789584,1516,X_55789584_1516,X_55789584_1516
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chrX,79771123,79775613,4490,tandem-duplication,X,,-1,-1,,,True,X_79771123,1517,X_79771123_1517,X_79771123_1517
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chrX,79771226,79772706,1480,inversion,X,,-1,-1,,,True,X_79771226,1518,X_79771226_1518,X_79771226_1518
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chrX,79775231,79776428,1197,inversion,X,,-1,-1,,,True,X_79775231,1519,X_79775231_1519,X_79775231_1519
t6_PDAC_case9_S3,PDAC_case9_S3,case9_S3_PDAC,case9,case9_S3,PDAC,t6,chrX,101107805,101117049,9244,deletion,X,intron,3,21,CENPI,ENST00000372927,True,X_101107805,1520,X_101107805_1520,X_101107805_1520
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr1,61239599,54423549,-6816050,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239599,25,1_61239599_25,1_61239599_25
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr1,61239834,54422527,-6817307,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239834,24,1_61239834_24,1_61239834_24
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr1,169029022,155298036,-13730986,translocation,3,,-1,-1,,,True,1_169029022,53,1_169029022_53,1_169029022_53
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr1,242148259,16410093,-225738166,translocation,X,intron,5,10,PLD5,ENST00000536534,True,1_242148259,75,1_242148259_75,1_242148259_75
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr2,3533359,3561772,28413,tandem-duplication,2,UTRintron,2,3,AC108488.1,ENST00000422961,True,2_3533359,78,2_3533359_78,2_3533359_78
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr3,70868955,70955853,86898,tandem-duplication,3,,-1,-1,,,True,3_70868955,1022,3_70868955_1022,3_70868955_1022
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr4,75120694,75419637,298943,inversion,4,,-1,-1,,,True,4_75120694,1039,4_75120694_1039,4_75120694_1039
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr4,75120975,75416175,295200,deletion,4,,-1,-1,,,True,4_75120975,1038,4_75120975_1038,4_75120975_1038
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr4,75416568,78102279,2685711,inversion,4,UTRintron,1,2,AC096759.1,ENST00000510744,True,4_75416568,1040,4_75416568_1040,4_75416568_1040
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr4,178886650,178889520,2870,tandem-duplication,4,,-1,-1,,,True,4_178886650,1044,4_178886650_1044,4_178886650_1044
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr5,2888314,2889014,700,inversion,5,,-1,-1,,,True,5_2888314,1049,5_2888314_1049,5_2888314_1049
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr5,2888887,3229642,340755,inversion,5,,-1,-1,,,True,5_2888887,1048,5_2888887_1048,5_2888887_1048
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr5,3178178,3264980,86802,deletion,5,UTRexon,1,2,LINC01377,ENST00000505396,True,5_3178178,1050,5_3178178_1050,5_3178178_1050
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr5,9938679,12612397,2673718,inversion,5,,-1,-1,,,True,5_9938679,1051,5_9938679_1051,5_9938679_1051
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr5,106488263,107278824,790561,deletion,5,,-1,-1,,,True,5_106488263,1054,5_106488263_1054,5_106488263_1054
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr5,110938757,110943462,4705,deletion,5,,-1,-1,,,True,5_110938757,1055,5_110938757_1055,5_110938757_1055
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,9838360,23789331,13950971,inversion,6,intron,4,8,OFCC1,ENST00000460363,True,6_9838360,1056,6_9838360_1056,6_9838360_1056
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,15354765,15359118,4353,inversion,6,intron,1,18,JARID2,ENST00000341776,True,6_15354765,1057,6_15354765_1057,6_15354765_1057
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,27648526,27716978,68452,deletion,6,,-1,-1,,,True,6_27648526,1058,6_27648526_1058,6_27648526_1058
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,42613524,49344377,6730853,inversion,6,intron,8,47,UBR2,ENST00000372899,True,6_42613524,1064,6_42613524_1064,6_42613524_1064
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,42814684,68055387,25240703,inversion,6,5UTRintron,4,15,BICRAL,ENST00000614467,True,6_42814684,1065,6_42814684_1065,6_42814684_1065
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,45862019,69912839,24050820,tandem-duplication,6,,-1,-1,,,True,6_45862019,1066,6_45862019_1066,6_45862019_1066
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,49041994,61693841,12651847,tandem-duplication,6,,-1,-1,,,True,6_49041994,1067,6_49041994_1067,6_49041994_1067
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,62142095,62731345,589250,deletion,6,intron,2,9,KHDRBS2,ENST00000281156,True,6_62142095,1069,6_62142095_1069,6_62142095_1069
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,63872396,66870575,2998179,deletion,6,intron,35,44,EYS,ENST00000370621,True,6_63872396,1070,6_63872396_1070,6_63872396_1070
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,67596853,69909115,2312262,inversion,6,,-1,-1,,,True,6_67596853,1071,6_67596853_1071,6_67596853_1071
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,67964692,68033299,68607,inversion,6,,-1,-1,,,True,6_67964692,1072,6_67964692_1072,6_67964692_1072
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr6,169126203,169126953,750,deletion,6,,-1,-1,,,True,6_169126203,1074,6_169126203_1074,6_169126203_1074
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr7,110547747,110565206,17459,tandem-duplication,7,,-1,-1,,,True,7_110547747,1076,7_110547747_1076,7_110547747_1076
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr8,104589810,105066770,476960,deletion,8,,-1,-1,,,True,8_104589810,1083,8_104589810_1083,8_104589810_1083
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr9,135733747,135772719,38972,tandem-duplication,9,intron,1,31,KCNT1,ENST00000628528,True,9_135733747,1086,9_135733747_1086,9_135733747_1086
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr10,124227052,124228360,1308,deletion,10,,-1,-1,,,True,10_124227052,1089,10_124227052_1089,10_124227052_1089
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr10,131823066,131824027,961,deletion,10,,-1,-1,,,True,10_131823066,1091,10_131823066_1091,10_131823066_1091
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr11,31627164,66057592,34430428,translocation,12,exon,6,12,ELP4,ENST00000395934,True,11_31627164,1093,11_31627164_1093,11_31627164_1093
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr14,20691542,20889410,197868,inversion,14,5UTRintron,1,2,RNASE4,ENST00000555835,True,14_20691542,1100,14_20691542_1100,14_20691542_1100
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr14,32316162,50585231,18269069,tandem-duplication,14,,-1,-1,,,True,14_32316162,1101,14_32316162_1101,14_32316162_1101
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr14,46991155,49505428,2514273,inversion,14,intron,8,17,MDGA2,ENST00000426342,True,14_46991155,1103,14_46991155_1103,14_46991155_1103
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,48150278,53448878,5298600,tandem-duplication,15,intron,14,17,MYEF2,ENST00000324324,True,15_48150278,1106,15_48150278_1106,15_48150278_1106
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,55900231,56100793,200562,deletion,15,intron,1,25,NEDD4,ENST00000508342,True,15_55900231,1107,15_55900231_1107,15_55900231_1107
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,58313423,60938986,2625563,tandem-duplication,15,5UTRintron,2,4,ALDH1A2,ENST00000558239,True,15_58313423,1108,15_58313423_1108,15_58313423_1108
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,68970594,93704233,24733639,tandem-duplication,15,intron,1,16,NOX5,ENST00000455873,True,15_68970594,1109,15_68970594_1109,15_68970594_1109
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,74316797,79888537,5571740,deletion,15,intron,11,19,CCDC33,ENST00000398814,True,15_74316797,1110,15_74316797_1110,15_74316797_1110
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,82617217,82820024,202807,tandem-duplication,15,5UTRintron,2,12,CPEB1,ENST00000620182,True,15_82617217,1111,15_82617217_1111,15_82617217_1111
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,93548516,93580690,32174,tandem-duplication,15,UTRintron,3,4,AC091078.1,ENST00000543286,True,15_93548516,1112,15_93548516_1112,15_93548516_1112
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr15,95241209,95445119,203910,deletion,15,UTRintron,1,3,LINC01197,ENST00000614853,True,15_95241209,1113,15_95241209_1113,15_95241209_1113
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr16,78494758,78654877,160119,deletion,16,intron,8,9,WWOX,ENST00000566780,True,16_78494758,1116,16_78494758_1116,16_78494758_1116
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,242894,243578,684,deletion,17,intron,6,9,RPH3AL,ENST00000323434,True,17_242894,1118,17_242894_1118,17_242894_1118
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,46740532,48326313,1585781,tandem-duplication,17,intron,17,21,NSF,ENST00000398238,True,17_46740532,1119,17_46740532_1119,17_46740532_1119
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,46829874,46832196,2322,inversion,17,,-1,-1,,,True,17_46829874,1120,17_46829874_1120,17_46829874_1120
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,46853228,49919211,3065983,inversion,17,intron,1,5,WNT9B,ENST00000393461,True,17_46853228,1121,17_46853228_1121,17_46853228_1121
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,46903214,53576345,6673131,tandem-duplication,17,,-1,-1,,,True,17_46903214,1122,17_46903214_1122,17_46903214_1122
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,46921576,162594121,115672545,translocation,2,UTRintron,1,3,AC005670.1,ENST00000572349,True,17_46921576,1021,17_46921576_1021,17_46921576_1021
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,46922687,58083841,11161154,translocation,5,UTRintron,1,3,AC005670.1,ENST00000572349,True,17_46922687,1053,17_46922687_1053,17_46922687_1053
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,47243332,53456934,6213602,inversion,17,,-1,-1,,,True,17_47243332,1123,17_47243332_1123,17_47243332_1123
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,47526270,54125305,6599035,deletion,17,intron,1,24,NPEPPS,ENST00000530173,True,17_47526270,1124,17_47526270_1124,17_47526270_1124
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,47532393,54090333,6557940,tandem-duplication,17,intron,2,24,NPEPPS,ENST00000530173,True,17_47532393,1125,17_47532393_1125,17_47532393_1125
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,47566871,54186787,6619916,deletion,17,intron,3,24,NPEPPS,ENST00000530173,True,17_47566871,1126,17_47566871_1126,17_47566871_1126
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,47666152,53381051,5714899,inversion,17,intron,9,22,KPNB1,ENST00000290158,True,17_47666152,1127,17_47666152_1127,17_47666152_1127
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,47936046,48262028,325982,deletion,17,,-1,-1,,,True,17_47936046,1128,17_47936046_1128,17_47936046_1128
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,51914262,51914681,419,inversion,17,intron,3,9,CA10,ENST00000451037,True,17_51914262,1129,17_51914262_1129,17_51914262_1129
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,55018477,55022348,3871,inversion,17,intron,8,18,STXBP4,ENST00000376352,True,17_55018477,1130,17_55018477_1130,17_55018477_1130
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr17,60601206,61499429,898223,deletion,17,intron,1,6,PPM1D,ENST00000305921,True,17_60601206,1131,17_60601206_1131,17_60601206_1131
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,1593639,5151729,3558090,inversion,18,UTRintron,2,4,AC008109.1,ENST00000583163,True,18_1593639,1133,18_1593639_1133,18_1593639_1133
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,1990621,21174120,19183499,tandem-duplication,18,UTRintron,2,6,AP005230.1,ENST00000584867,True,18_1990621,1134,18_1990621_1134,18_1990621_1134
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,3328360,3923601,595241,tandem-duplication,18,,-1,-1,,,True,18_3328360,1135,18_3328360_1135,18_3328360_1135
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,5150982,24669871,19518889,inversion,18,intron,1,2,AKAIN1,ENST00000580650,True,18_5150982,1136,18_5150982_1136,18_5150982_1136
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,6043026,7736249,1693223,inversion,18,intron,16,19,L3MBTL4,ENST00000317931,True,18_6043026,1137,18_6043026_1137,18_6043026_1137
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,6563350,25950390,19387040,inversion,18,UTRintron,2,6,LINC01387,ENST00000584361,True,18_6563350,1138,18_6563350_1138,18_6563350_1138
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,7144265,25137458,17993193,inversion,18,,-1,-1,,,True,18_7144265,1139,18_7144265_1139,18_7144265_1139
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,13415529,13419046,3517,tandem-duplication,18,intron,3,6,LDLRAD4,ENST00000399848,True,18_13415529,1140,18_13415529_1140,18_13415529_1140
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,13746109,13749822,3713,tandem-duplication,18,intron,8,12,RNMT,ENST00000592764,True,18_13746109,1141,18_13746109_1141,18_13746109_1141
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,25905553,29090842,3185289,tandem-duplication,18,,-1,-1,,,True,18_25905553,1143,18_25905553_1143,18_25905553_1143
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr18,30856549,30861323,4774,inversion,18,,-1,-1,,,True,18_30856549,1144,18_30856549_1144,18_30856549_1144
t4_IPMN_HGD_PDAC_case9_S4,IPMN_HGD_PDAC_case9_S4,case9_S4_IPMN_HGD_PDAC,case9,case9_S4,IPMN_HGD_PDAC,t4,chr20,55074579,129429527,74354948,translocation,9,,-1,-1,,,True,20_55074579,1085,20_55074579_1085,20_55074579_1085
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr1,12174260,56537177,44362917,translocation,10,intron,1,10,TNFRSF1B,ENST00000376259,True,1_12174260,8,1_12174260_8,1_12174260_8
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr1,61239834,54422527,-6817307,translocation,17,intron,2,11,NFIA,ENST00000407417,True,1_61239834,21,1_61239834_21,1_61239834_21
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr1,242148384,16410093,-225738291,translocation,X,intron,5,10,PLD5,ENST00000536534,True,1_242148384,48,1_242148384_48,1_242148384_48
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr2,24042830,24064424,21594,deletion,2,5UTRintron,1,4,WDCP,ENST00000295148,True,2_24042830,50,2_24042830_50,2_24042830_50
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr2,158428634,123123849,-35304785,translocation,4,intron,1,14,CCDC148,ENST00000283233,True,2_158428634,714,2_158428634_714,2_158428634_714
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr3,88850491,88859478,8987,inversion,3,,-1,-1,,,True,3_88850491,722,3_88850491_722,3_88850491_722
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr3,103083179,103086201,3022,deletion,3,,-1,-1,,,True,3_103083179,724,3_103083179_724,3_103083179_724
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr4,153862918,153881601,18683,deletion,4,,-1,-1,,,True,4_153862918,733,4_153862918_733,4_153862918_733
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr4,162935474,172743168,9807694,inversion,4,,-1,-1,,,True,4_162935474,735,4_162935474_735,4_162935474_735
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr4,165484813,181702149,16217336,inversion,4,intron,5,9,CPE,ENST00000402744,True,4_165484813,736,4_165484813_736,4_165484813_736
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr4,165995878,168398831,2402953,deletion,4,intron,5,21,TLL1,ENST00000061240,True,4_165995878,737,4_165995878_737,4_165995878_737
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr5,171465313,171627774,162461,deletion,5,,-1,-1,,,True,5_171465313,739,5_171465313_739,5_171465313_739
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr5,177336603,177407384,70781,tandem-duplication,5,intron,6,8,LMAN2,ENST00000303127,True,5_177336603,741,5_177336603_741,5_177336603_741
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr8,142648649,142814387,165738,tandem-duplication,8,,-1,-1,,,True,8_142648649,752,8_142648649_752,8_142648649_752
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr12,84095446,86255654,2160208,deletion,12,,-1,-1,,,True,12_84095446,769,12_84095446_769,12_84095446_769
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr12,90365989,171755629,81389640,translocation,5,,-1,-1,,,True,12_90365989,740,12_90365989_740,12_90365989_740
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr14,93858551,94245453,386902,tandem-duplication,14,,-1,-1,,,True,14_93858551,771,14_93858551_771,14_93858551_771
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr15,89355257,18166448,-71188809,translocation,21,,-1,-1,,,True,15_89355257,776,15_89355257_776,15_89355257_776
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr15,97525902,97545699,19797,tandem-duplication,15,,-1,-1,,,True,15_97525902,778,15_97525902_778,15_97525902_778
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,22522090,60594263,38072173,deletion,17,,-1,-1,,,True,17_22522090,782,17_22522090_782,17_22522090_782
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,46740532,48326313,1585781,tandem-duplication,17,intron,17,21,NSF,ENST00000398238,True,17_46740532,784,17_46740532_784,17_46740532_784
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,46829874,46832196,2322,inversion,17,,-1,-1,,,True,17_46829874,785,17_46829874_785,17_46829874_785
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,46853228,49919211,3065983,inversion,17,intron,1,5,WNT9B,ENST00000393461,True,17_46853228,786,17_46853228_786,17_46853228_786
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,46903214,53576345,6673131,tandem-duplication,17,,-1,-1,,,True,17_46903214,787,17_46903214_787,17_46903214_787
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,47532393,54090333,6557940,tandem-duplication,17,intron,2,24,NPEPPS,ENST00000530173,True,17_47532393,788,17_47532393_788,17_47532393_788
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,47666152,53381077,5714925,inversion,17,intron,9,22,KPNB1,ENST00000290158,True,17_47666152,789,17_47666152_789,17_47666152_789
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,47936046,48262028,325982,deletion,17,,-1,-1,,,True,17_47936046,790,17_47936046_790,17_47936046_790
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,55018422,55022348,3926,inversion,17,intron,8,18,STXBP4,ENST00000376352,True,17_55018422,791,17_55018422_791,17_55018422_791
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr17,60601206,61499429,898223,deletion,17,intron,1,6,PPM1D,ENST00000305921,True,17_60601206,792,17_60601206_792,17_60601206_792
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr18,53317382,53333682,16300,deletion,18,intron,13,29,DCC,ENST00000442544,True,18_53317382,797,18_53317382_797,18_53317382_797
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chr19,54093434,54098936,5502,deletion,19,,-1,-1,,,True,19_54093434,799,19_54093434_799,19_54093434_799
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chrX,40087865,40107031,19166,deletion,X,5UTRintron,1,14,BCOR,ENST00000378455,True,X_40087865,806,X_40087865_806,X_40087865_806
t6_PDAC_case9_S6,PDAC_case9_S6,case9_S6_PDAC,case9,case9_S6,PDAC,t6,chrX,79775231,79776431,1200,inversion,X,,-1,-1,,,True,X_79775231,807,X_79775231_807,X_79775231_807
t6_PDAC_case11_S8,PDAC_case11_S8,case11_S8_PDAC,case11,case11_S8,PDAC,t6,chrY,56834895,56836586,1691,deletion,Y,,-1,-1,,,True,Y_56834895,1240,Y_56834895_1240,Y_56834895_1240
t6_PDAC_case15_S10,PDAC_case15_S10,case15_S10_PDAC,case15,case15_S10,PDAC,t6,chrY,26641087,26656710,15623,tandem-duplication,Y,,-1,-1,,,True,Y_26641087,1801,Y_26641087_1801,Y_26641087_1801
t2_IPMN_LGD_case15_S1,IPMN_LGD_case15_S1,case15_S1_IPMN_LGD,case15,case15_S1,IPMN_LGD,t2,chrY,11722048,11723229,1181,deletion,Y,,-1,-1,,,True,Y_11722048,2517,Y_11722048_2517,Y_11722048_2517
t3_IPMN_HGD_case15_S4,IPMN_HGD_case15_S4,case15_S4_IPMN_HGD,case15,case15_S4,IPMN_HGD,t3,chrY,11722048,11723234,1186,deletion,Y,,-1,-1,,,True,Y_11722048,1958,Y_11722048_1958,Y_11722048_1958
t6_PDAC_case16_S5,PDAC_case16_S5,case16_S5_PDAC,case16,case16_S5,PDAC,t6,chrY,6116966,6118653,1685,inversion,chrY,,-1,-1,,,True,Y_6116966,1260,Y_6116966_1260,Y_6116966_1260
t2_IPMN_LGD_case3_S4,IPMN_LGD_case3_S4,case3_S4_IPMN_LGD,case3,case3_S4,IPMN_LGD,t2,chrY,56834906,56837368,2462,deletion,Y,,-1,-1,,,True,Y_56834906,1700,Y_56834906_1700,Y_56834906_1700
t6_PDAC_case3_S5,PDAC_case3_S5,case3_S5_PDAC,case3,case3_S5,PDAC,t6,chrY,56834906,56837388,2482,deletion,Y,,-1,-1,,,True,Y_56834906,883,Y_56834906_883,Y_56834906_883
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chrY,10902963,11317593,414630,inversion,Y,,-1,-1,,,True,Y_10902963,1240,Y_10902963_1240,Y_10902963_1240
t2_IPMN_LGD_case4_S3,IPMN_LGD_case4_S3,case4_S3_IPMN_LGD,case4,case4_S3,IPMN_LGD,t2,chrY,11318619,56842344,45523725,inversion,Y,,-1,-1,,,True,Y_11318619,1254,Y_11318619_1254,Y_11318619_1254