msCluster,snvPos,typeTumorSample,samples,CHROM,START,END,SVLEN,svclass,CHR2,rgn,gene,tid,PASS
6,5550620,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,5662796,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,6004251,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,6671438,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,7037146,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,8423972,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,9721491,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,11303544,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
2,12402514,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,12456651,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,14733988,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,15371562,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,19568340,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,20575014,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,22233270,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,23560102,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,27373446,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
6,27373446,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
6,27373446,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
7,29739568,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
7,29739568,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,29739568,t2_IPMN_LGD_case4_S3,case4_S3,chr1,4616188,31722306,27106118,deletion,1,,,,True
6,35603709,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
6,35603709,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
5,43048793,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
5,43048793,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,44671091,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
7,44671091,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,47847001,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
7,47847001,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,48050245,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
7,48050245,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,48070176,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
7,48070176,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
6,49992921,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
6,49992921,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
6,49992921,t2_IPMN_LGD_case4_S1,case4_S1,chr1,49780717,50021250,240533,deletion,1,intron,AGBL4,ENST00000371839,True
3,51262503,t2_IPMN_LGD_case4_S1,case4_S1,chr1,26725108,57311678,30586570,deletion,1,intron,ARID1A,ENST00000324856,True
3,51262503,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
4,59641051,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
4,59641051,t2_IPMN_LGD_case4_S1,case4_S1,chr1,56534153,70104997,13570844,deletion,1,intron,PLPP3,ENST00000371250,True
7,61194349,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,61194349,t2_IPMN_LGD_case4_S1,case4_S1,chr1,56534153,70104997,13570844,deletion,1,intron,PLPP3,ENST00000371250,True
7,62690517,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
7,62690517,t2_IPMN_LGD_case4_S1,case4_S1,chr1,56534153,70104997,13570844,deletion,1,intron,PLPP3,ENST00000371250,True
6,63491156,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
6,63491156,t2_IPMN_LGD_case4_S1,case4_S1,chr1,56534153,70104997,13570844,deletion,1,intron,PLPP3,ENST00000371250,True
6,69094092,t2_IPMN_LGD_case4_S1,case4_S1,chr1,27050627,70104933,43054306,tandem-duplication,1,,,,True
6,69094092,t2_IPMN_LGD_case4_S1,case4_S1,chr1,56534153,70104997,13570844,deletion,1,intron,PLPP3,ENST00000371250,True
7,4697954,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,4773089,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
4,4949583,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,5072259,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,5487518,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,5513540,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
2,5710079,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,7090317,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,10113003,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,14982612,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
2,15009031,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
3,18826241,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
4,20403762,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,22333575,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
3,25240546,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
2,25642611,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,25715402,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,27024186,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,29226021,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
3,30100996,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,31170759,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,31501360,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,33282798,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
2,35041078,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,35627949,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
3,36244835,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,39544082,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,41194113,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,42069687,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,43103871,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,45382060,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,45650404,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,48308118,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,49445605,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,49655615,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,50417421,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
4,50864604,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
4,50864612,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,50865007,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,51949946,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,54329719,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,56868700,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
1,57212034,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,57657569,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,58946453,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,62505838,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,63534106,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
2,64017588,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,72238328,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,72699589,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,75473841,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,76036938,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,77149875,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
4,77485042,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,78438674,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,79159853,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,79488186,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,79720810,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
3,80087669,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,80683624,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,80823146,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,82874130,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,83175832,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,84513708,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,84593063,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,85796859,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,86076555,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,91955087,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,95108870,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,95303459,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
3,96540707,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,96999352,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,101795894,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,105953564,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,106770434,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,106804607,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,107252496,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,109428135,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,110114037,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
7,110396008,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
4,113294193,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
1,115058098,t2_IPMN_LGD_case4_S1,case4_S1,chr2,4618729,116141772,111523043,translocation,8,,,,True
6,233935825,t2_IPMN_LGD_case4_S1,case4_S1,chr2,232953196,234564600,1611404,deletion,2,intron,NGEF,ENST00000264051,True
3,76672172,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,76725813,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
3,76768379,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,76820360,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,77382065,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,78014786,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,78752091,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,80428599,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,80604619,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,80846085,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,82239665,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,83143621,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,83364756,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,83456412,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,84674052,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,87395026,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,91336793,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,95543492,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,95685711,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,95777525,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,96575845,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,97008258,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,98011243,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,99341099,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,101617442,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,102761182,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
4,103314552,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
4,103509599,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,106162455,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
1,106536673,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,106751358,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,107011973,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,107315760,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,117115998,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
6,118048192,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,118134896,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
7,120503559,t2_IPMN_LGD_case4_S1,case4_S1,chr3,76594980,120917072,44322092,translocation,7,intron,ROBO2,ENST00000487694,True
5,27635634,t2_IPMN_LGD_case4_S1,case4_S1,chr6,27175816,32536263,5360447,deletion,6,,,,True
4,29728997,t2_IPMN_LGD_case4_S1,case4_S1,chr6,27175816,32536263,5360447,deletion,6,,,,True
2,30783648,t2_IPMN_LGD_case4_S1,case4_S1,chr6,27175816,32536263,5360447,deletion,6,,,,True
6,32461925,t2_IPMN_LGD_case4_S1,case4_S1,chr6,27175816,32536263,5360447,deletion,6,,,,True
3,1912662,t2_IPMN_LGD_case4_S1,case4_S1,chr9,836073,4353668,3517595,deletion,9,,,,True
6,18076949,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,18675686,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
3,18997279,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,19331146,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,20838725,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,21180825,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,22164277,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
4,28657859,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,29720356,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,31574829,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
3,35668982,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,35729380,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,36217903,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
3,36802471,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,37969372,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,37997044,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,38708619,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,42333559,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,43218790,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
6,43218790,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,48683572,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,48683572,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,48962921,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,48962921,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,49229052,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
6,49229052,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,53033201,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,53033201,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,53615376,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,53615376,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
4,53786088,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
4,53786088,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
2,53853134,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
2,53853134,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,54227668,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,54227668,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,54484320,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,54484320,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,54624786,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
6,54624786,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,54917865,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
6,54917865,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,55549576,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
6,55549576,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,56045736,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,56045736,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,56334607,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,56334607,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,57118849,t2_IPMN_LGD_case4_S3,case4_S3,chr10,43181905,58829982,15648077,translocation,4,intron,CSGALNACT2,ENST00000374466,True
7,57118849,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,61424886,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,62920467,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,64313845,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,64865297,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,67691873,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,73777435,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,76853999,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,78394427,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,81038302,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,81039982,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,81074696,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,83231102,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
1,83266453,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,83888891,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,86213567,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,89322217,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,90196727,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
6,92194561,t2_IPMN_LGD_case4_S5,case4_S5,chr10,17575605,92538793,74963188,translocation,13,,,,True
7,23040356,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
7,23040359,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
7,23282872,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
6,24431904,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
6,25013321,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
6,25245350,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
6,26258547,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
7,26473456,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
7,28103706,t2_IPMN_LGD_case4_S3,case4_S3,chr12,18171934,30137674,11965740,translocation,18,,,,True
6,66330065,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,67679553,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,68099259,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,70466770,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,72794357,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,73181148,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,75420822,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,78737439,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,80342802,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,80714443,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,83545510,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,84155971,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,85417776,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,86594753,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,86957229,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
2,87105845,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,87134001,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
1,87156307,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
3,91922940,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,94354072,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,95556879,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
4,96104288,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,97865498,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
4,98220617,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,99120440,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,101563966,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
5,102277009,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,102364538,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,103187492,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,105946854,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,109670534,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,110184102,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,111010749,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
4,114080156,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,115133294,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,115257801,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,115517645,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,115586342,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
3,115676045,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,116346391,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
2,117189947,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,117966721,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,118423015,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,118907077,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,124192278,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,126272622,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,126644046,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,127195647,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,127246408,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,127858274,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
3,128078056,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,128506576,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
6,128977403,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,129936735,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,131557590,t2_IPMN_LGD_case4_S1,case4_S1,chr12,66057592,156698723,90641131,translocation,6,,,,True
7,42108112,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
7,42108112,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
7,42108112,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
7,44934766,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
7,44934766,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
7,44934766,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
7,48110130,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
7,48110130,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
7,48110130,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
2,48281232,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
2,48281232,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
2,48281232,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
6,48661168,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
6,48661168,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
6,48661168,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
7,49031193,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
7,49031193,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
7,49031193,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
7,50310386,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41845529,51741779,9896250,tandem-duplication,17,exon,KLHL10,ENST00000293303,True
7,50310386,t2_IPMN_LGD_case4_S1,case4_S1,chr17,41864328,51810106,9945778,deletion,17,intron,KLHL11,ENST00000319121,True
7,50310386,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr17,41864185,51810106,9945921,deletion,17,intron,KLHL11,ENST00000319121,True
5,4660400,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
5,4660400,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
7,4700337,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
7,4700337,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,4779053,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,4779053,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
7,8115248,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
7,8115248,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,11255284,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,11255284,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,13512408,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,13512408,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,14211569,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,14211569,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,17117233,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,17117233,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
3,18126136,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
3,18126136,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
7,20807220,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
7,20807220,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
7,20921460,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
7,20921460,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,21380339,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,21380339,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
3,30299694,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
3,30299694,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,31161898,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,31161898,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
7,31607191,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
7,31607191,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,31693809,t2_IPMN_LGD_case4_S1,case4_S1,chr19,2840227,33400674,30560447,translocation,9,,,,True
6,31693809,t2_IPMN_LGD_case4_S3,case4_S3,chr19,2840227,33400642,30560415,translocation,9,,,,True
6,2618742,t2_IPMN_LGD_case4_S1,case4_S1,chr20,2367022,5033239,2666217,inversion,20,,,,True
6,2618742,t2_IPMN_LGD_case4_S1,case4_S1,chr20,2519404,5299904,2780500,deletion,20,5UTRintron,ZNF343,ENST00000612935,True
6,18747133,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,SEC23B,ENST00000336714,True
6,18747133,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18530426,23048775,4518349,inversion,20,intron,SEC23B,ENST00000336714,True
6,18747133,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18531523,24650651,6119128,deletion,20,intron,SEC23B,ENST00000336714,True
6,18747133,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,SEC23B,ENST00000336714,True
7,18947228,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,SEC23B,ENST00000336714,True
7,18947228,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18530426,23048775,4518349,inversion,20,intron,SEC23B,ENST00000336714,True
7,18947228,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18531523,24650651,6119128,deletion,20,intron,SEC23B,ENST00000336714,True
7,18947228,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,SEC23B,ENST00000336714,True
7,18947228,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18927198,22381877,3454679,inversion,20,,,,True
7,18947228,t5_PDAC_IPMN_LGD_case4_S2,case4_S2,chr20,18896972,18948164,51192,deletion,20,,,,True
7,21518237,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,SEC23B,ENST00000336714,True
7,21518237,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18530426,23048775,4518349,inversion,20,intron,SEC23B,ENST00000336714,True
7,21518237,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18531523,24650651,6119128,deletion,20,intron,SEC23B,ENST00000336714,True
7,21518237,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,SEC23B,ENST00000336714,True
7,21518237,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18927198,22381877,3454679,inversion,20,,,,True
7,21825594,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,SEC23B,ENST00000336714,True
7,21825594,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18530426,23048775,4518349,inversion,20,intron,SEC23B,ENST00000336714,True
7,21825594,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18531523,24650651,6119128,deletion,20,intron,SEC23B,ENST00000336714,True
7,21825594,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,SEC23B,ENST00000336714,True
7,21825594,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18927198,22381877,3454679,inversion,20,,,,True
7,21896365,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,SEC23B,ENST00000336714,True
7,21896365,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18530426,23048775,4518349,inversion,20,intron,SEC23B,ENST00000336714,True
7,21896365,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18531523,24650651,6119128,deletion,20,intron,SEC23B,ENST00000336714,True
7,21896365,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,SEC23B,ENST00000336714,True
7,21896365,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18927198,22381877,3454679,inversion,20,,,,True
7,21990906,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18528541,23045953,4517412,tandem-duplication,20,intron,SEC23B,ENST00000336714,True
7,21990906,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18530426,23048775,4518349,inversion,20,intron,SEC23B,ENST00000336714,True
7,21990906,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18531523,24650651,6119128,deletion,20,intron,SEC23B,ENST00000336714,True
7,21990906,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18532706,23048631,4515925,tandem-duplication,20,exon,SEC23B,ENST00000336714,True
7,21990906,t2_IPMN_LGD_case4_S1,case4_S1,chr20,18927198,22381877,3454679,inversion,20,,,,True